Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02158

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,257,161	+				-1.3
2,257,161	+				-1.3
2,257,161	+				-0.1
2,257,161	+				+0.6
2,257,161	+				+1.9
2,257,162	-				-0.1
2,257,162	-				-0.1
2,257,162	-				+0.5
2,257,162	-				-0.8
2,257,162	-				-0.6
2,257,173	+				+1.5
2,257,173	+				+1.3
2,257,173	+				-1.1
2,257,173	+				+0.2
2,257,173	+				+0.5
2,257,174	-				-2.2
2,257,174	-				-0.2
2,257,219	+				-1.5
2,257,219	+				-1.1
2,257,219	+				+0.6
2,257,219	+				-2.9
2,257,219	+				+0.5
2,257,219	+				-0.3
2,257,219	+				-0.5
2,257,219	+				-1.8
2,257,219	+				-0.1
2,257,219	+				-1.3
2,257,219	+				-2.7
2,257,219	+				-1.6
2,257,219	+				+3.5
2,257,219	+				+0.5
2,257,219	+				-1.9
2,257,220	-				-0.5
2,257,220	-				+0.5
2,257,220	-				-0.5
2,257,220	-				-2.0
2,257,220	-				-0.9
2,257,220	-				-1.0
2,257,220	-				-1.1
2,257,346	+				-0.1
2,257,346	+				+2.3
2,257,346	+				+0.6
2,257,346	+				-2.2
2,257,346	+				-1.1
2,257,346	+				-1.0
2,257,347	-				-0.5
2,257,347	-				-1.1
2,257,347	-				-1.5
2,257,347	-				+0.9
2,257,347	-				-0.5
2,257,347	-				-3.2
2,257,347	-				-0.5
2,257,366	+				-0.5
2,257,366	+				-0.7
2,257,366	+				-0.5
2,257,366	+				-0.5
2,257,366	+				-0.1
2,257,366	+				-1.0
2,257,366	+				-0.5
2,257,367	-				+1.2
2,257,367	-				+0.9
2,257,367	-				-1.1
2,257,367	-				+1.5
2,257,367	-				+1.1
2,257,367	-				-0.4
2,257,367	-				+0.7
2,257,367	-				-1.7
2,257,367	-				+1.1
2,257,367	-				+2.2
2,257,367	-				+1.5
2,257,442	+				+0.9
2,257,442	+				-0.1
2,257,442	+				-0.3
2,257,442	+				+0.2
2,257,442	+				-0.7
2,257,442	+				+0.5
2,257,442	+				+0.7
2,257,442	+				-0.1
2,257,442	+				-1.7
2,257,442	+				-1.8
2,257,442	+				-2.1
2,257,442	+				-0.8
2,257,442	+				-1.1
2,257,442	+				+0.2
2,257,442	+				-0.1
2,257,442	+				+0.5
2,257,442	+				-1.7
2,257,442	+				-1.3
2,257,442	+				+1.5
2,257,442	+				-0.5
2,257,442	+				-1.0
2,257,443	-				+0.5
2,257,443	-				+0.5
2,257,443	-				-0.3
2,257,443	-				-1.1
2,257,443	-				-0.8
2,257,443	-				+0.3
2,257,443	-				+0.5
2,257,443	-				-0.4
2,257,443	-				-0.8
2,257,443	-				-1.9
2,257,443	-				+0.5
2,257,443	-				+1.8
2,257,443	-				-0.8
2,257,443	-				+1.1
2,257,443	-				-0.4
2,257,443	-				+1.1
2,257,443	-				-0.8
2,257,443	-				-0.9
2,257,517	+				-0.3
2,257,517	+				-3.0
2,257,518	-				-2.8
2,257,518	-				+0.9
2,257,518	-				+0.1
2,257,524	+				-2.0
2,257,524	+				-0.1
2,257,524	+				+0.5
2,257,524	+				-0.3
2,257,525	-				+1.5
2,257,525	-				-0.1
2,257,525	-				-0.1
2,257,579	-				+0.9
2,257,792	+				-2.8
2,257,793	-				+0.5
2,257,818	+				+0.5
2,257,819	-				-1.5
2,257,819	-				-0.7
2,257,819	-				-1.8
2,258,100	-				-0.5
2,258,689	+				-0.3
2,258,689	+				+0.7
2,258,689	+				+0.5
2,258,689	+				-0.6
2,258,689	+				-0.8
2,258,689	+				+0.8
2,258,689	+				-1.3
2,258,689	+				+2.1
2,258,689	+				-1.1
2,258,689	+				+0.7
2,258,689	+				-0.9
2,258,689	+				-0.8
2,258,689	+				-0.1
2,258,689	+				-0.8
2,258,689	+				+0.2
2,258,689	+				-0.1
2,258,690	-				-0.2
2,258,690	-				-1.7
2,258,690	-				-1.1
2,258,690	-				-1.1
2,258,690	-				-0.5
2,258,690	-				-0.5
2,258,690	-				-0.5
2,258,690	-				-0.6
2,258,690	-				-0.5
2,258,690	-				-0.5
2,258,690	-				-0.5
2,258,690	-				+0.5
2,258,690	-				+0.7
2,258,690	-				+2.1
2,258,690	-				-2.8
2,258,690	-				-0.7
2,258,690	-				-1.0
2,258,690	-				-2.0
2,258,690	-				+2.5
2,258,690	-				-1.5
2,258,726	+				-2.1
2,258,726	+				-1.5
2,258,726	+				-1.2
2,258,726	+				-1.0
2,258,726	+				-1.1
2,258,727	-				-0.8
2,258,727	-				+0.5
2,258,727	-				-1.3
2,258,776	+				-0.1
2,258,776	+				+0.5
2,258,776	+				-2.0
2,258,776	+				-0.5
2,258,776	+				+0.9
2,258,776	+				-0.5
2,258,776	+				-0.4
2,258,776	+				-0.8
2,258,776	+				-0.5
2,258,776	+				-0.8
2,258,776	+				-0.5
2,258,776	+				+1.1
2,258,776	+				-1.0
2,258,776	+				+0.5
2,258,776	+				-0.4
2,258,776	+				-0.1
2,258,776	+				-1.1
2,258,776	+				+0.9
2,258,777	-				-0.6
2,258,777	-				+0.2
2,258,777	-				+1.5
2,258,777	-				-0.3
2,258,777	-				-0.4
2,258,777	-				-0.8
2,258,777	-				+0.5
2,258,777	-				-0.3
2,258,777	-				-1.6
2,258,777	-				+0.2
2,258,777	-				+0.3
2,258,777	-				-0.8
2,258,777	-				-1.5
2,258,777	-				-0.8
2,258,777	-				-1.3
2,258,793	+				+0.5
2,258,793	+				-0.8
2,258,793	+				-0.7
2,258,793	+				-2.9
2,258,793	+				-0.5
2,258,793	+				-1.1
2,258,793	+				-0.7
2,258,793	+				+2.5
2,258,793	+				+1.1
2,258,793	+				-0.4
2,258,793	+				-1.1
2,258,793	+				+2.1
2,258,793	+				-0.1
2,258,793	+				-1.8
2,258,793	+				+0.9
2,258,793	+				-0.1
2,258,793	+				-0.3
2,258,793	+				+0.3
2,258,793	+				+0.2
2,258,794	-				-1.5
2,258,794	-				-0.7
2,258,794	-				-1.1
2,258,794	-				+1.5
2,258,794	-				-1.7
2,258,794	-				-1.2
2,258,794	-				-0.5
2,258,794	-				-0.3
2,258,794	-				+0.5
2,258,794	-				-0.8
2,258,794	-				+0.5
2,258,794	-				-0.8
2,258,794	-				-0.7
2,258,794	-				-0.5
2,258,794	-				-0.1
2,258,794	-				-0.5
2,258,794	-				-0.5
2,258,794	-				-1.7
2,258,794	-				-1.1
2,258,794	-				-1.8
2,258,794	-				-1.2
2,258,794	-				+0.7
2,258,830	+				-0.4
2,258,830	+				-0.5
2,258,830	+				-0.6
2,258,830	+				+0.5
2,258,830	+				-0.1
2,258,830	+				-0.7
2,258,830	+				+0.1
2,258,830	+				-0.3
2,258,830	+				-0.5
2,258,830	+				-0.1
2,258,831	-				+0.3
2,258,831	-				-0.7
2,258,831	-				-1.7
2,258,831	-				+1.5
2,258,831	-				-1.1
2,258,831	-				+0.7
2,258,831	-				-0.5
2,258,831	-				-1.5
2,258,831	-				-0.7
2,258,831	-				+0.2
2,258,831	-				-1.1
2,258,831	-				-0.0
2,258,831	-				-1.5
2,258,831	-				-0.8
2,259,064	+		MPMX19_02159	0.26	-0.1
2,259,064	+		MPMX19_02159	0.26	-1.1
2,259,064	+		MPMX19_02159	0.26	-2.5
2,259,064	+		MPMX19_02159	0.26	-0.3
2,259,064	+		MPMX19_02159	0.26	-0.8
2,259,065	-		MPMX19_02159	0.26	-0.3
2,259,065	-		MPMX19_02159	0.26	-0.5
2,259,065	-		MPMX19_02159	0.26	-0.3
2,259,106	+		MPMX19_02159	0.30	+1.5
2,259,106	+		MPMX19_02159	0.30	-1.1
2,259,106	+		MPMX19_02159	0.30	-0.5
2,259,106	+		MPMX19_02159	0.30	+0.5
2,259,106	+		MPMX19_02159	0.30	+0.1
2,259,106	+		MPMX19_02159	0.30	-1.5
2,259,106	+		MPMX19_02159	0.30	+0.2
2,259,106	+		MPMX19_02159	0.30	-0.5
2,259,106	+		MPMX19_02159	0.30	+0.7
2,259,107	-		MPMX19_02159	0.31	-1.9
2,259,107	-		MPMX19_02159	0.31	+0.5
2,259,107	-		MPMX19_02159	0.31	+0.8
2,259,107	-		MPMX19_02159	0.31	-1.1
2,259,107	-		MPMX19_02159	0.31	-0.8
2,259,107	-		MPMX19_02159	0.31	+0.2
2,259,107	-		MPMX19_02159	0.31	-1.1
2,259,107	-		MPMX19_02159	0.31	-0.5
2,259,107	-		MPMX19_02159	0.31	-0.8
2,259,107	-		MPMX19_02159	0.31	+0.3
2,259,107	-		MPMX19_02159	0.31	+0.5
2,259,107	-		MPMX19_02159	0.31	-1.3
2,259,107	-		MPMX19_02159	0.31	-0.1
2,259,107	-		MPMX19_02159	0.31	-0.5
2,259,107	-		MPMX19_02159	0.31	-1.1
2,259,107	-		MPMX19_02159	0.31	-1.1
2,259,109	+		MPMX19_02159	0.31	+0.5
2,259,110	-		MPMX19_02159	0.31	-0.8
2,259,110	-		MPMX19_02159	0.31	-0.1
2,259,190	+		MPMX19_02159	0.40	-0.1
2,259,190	+		MPMX19_02159	0.40	-1.5
2,259,190	+		MPMX19_02159	0.40	-0.5
2,259,190	+		MPMX19_02159	0.40	-0.8
2,259,190	+		MPMX19_02159	0.40	-0.1
2,259,190	+		MPMX19_02159	0.40	+0.2
2,259,190	+		MPMX19_02159	0.40	-1.8
2,259,190	+		MPMX19_02159	0.40	+0.3
2,259,190	+		MPMX19_02159	0.40	+0.5
2,259,190	+		MPMX19_02159	0.40	-1.0
2,259,190	+		MPMX19_02159	0.40	+1.5
2,259,190	+		MPMX19_02159	0.40	+0.5
2,259,190	+		MPMX19_02159	0.40	-0.5
2,259,191	-		MPMX19_02159	0.40	-1.5
2,259,191	-		MPMX19_02159	0.40	-1.1
2,259,191	-		MPMX19_02159	0.40	+0.7
2,259,191	-		MPMX19_02159	0.40	-2.0
2,259,191	-		MPMX19_02159	0.40	-0.1
2,259,191	-		MPMX19_02159	0.40	-1.3
2,259,191	-		MPMX19_02159	0.40	-0.8
2,259,191	-		MPMX19_02159	0.40	-1.8
2,259,436	+		MPMX19_02159	0.69	-1.7
2,259,436	+		MPMX19_02159	0.69	+1.1
2,259,436	+		MPMX19_02159	0.69	-1.7
2,259,436	+		MPMX19_02159	0.69	+0.2
2,259,436	+		MPMX19_02159	0.69	+2.5
2,259,436	+		MPMX19_02159	0.69	-0.5
2,259,436	+		MPMX19_02159	0.69	+1.1
2,259,436	+		MPMX19_02159	0.69	-0.1
2,259,436	+		MPMX19_02159	0.69	+0.5
2,259,436	+		MPMX19_02159	0.69	+0.9
2,259,436	+		MPMX19_02159	0.69	+0.2
2,259,436	+		MPMX19_02159	0.69	-1.1
2,259,436	+		MPMX19_02159	0.69	-0.4
2,259,436	+		MPMX19_02159	0.69	-2.3
2,259,436	+		MPMX19_02159	0.69	+1.5
2,259,437	-		MPMX19_02159	0.69	+0.3
2,259,437	-		MPMX19_02159	0.69	-0.5
2,259,437	-		MPMX19_02159	0.69	-1.0
2,259,437	-		MPMX19_02159	0.69	-1.6
2,259,437	-		MPMX19_02159	0.69	-0.1
2,259,437	-		MPMX19_02159	0.69	-0.3
2,259,437	-		MPMX19_02159	0.69	-0.1
2,259,437	-		MPMX19_02159	0.69	-0.5
2,259,437	-		MPMX19_02159	0.69	-1.5
2,259,437	-		MPMX19_02159	0.69	+0.5
2,259,437	-		MPMX19_02159	0.69	-1.1
2,259,437	-		MPMX19_02159	0.69	+1.5
2,259,437	-		MPMX19_02159	0.69	-2.2
2,259,437	-		MPMX19_02159	0.69	-2.2
2,259,437	-		MPMX19_02159	0.69	+2.1
2,259,437	-		MPMX19_02159	0.69	-0.8
2,259,437	-		MPMX19_02159	0.69	-1.1
2,259,437	-		MPMX19_02159	0.69	-1.1
2,259,437	-		MPMX19_02159	0.69	-1.6
2,259,437	-		MPMX19_02159	0.69	-2.1
2,259,437	-		MPMX19_02159	0.69	-0.5
2,259,437	-		MPMX19_02159	0.69	-1.7
2,259,437	-		MPMX19_02159	0.69	-0.5
2,259,484	+		MPMX19_02159	0.74	+0.5
2,259,484	+		MPMX19_02159	0.74	-1.1
2,259,484	+		MPMX19_02159	0.74	-0.5
2,259,484	+		MPMX19_02159	0.74	-0.6
2,259,484	+		MPMX19_02159	0.74	-0.5
2,259,485	-		MPMX19_02159	0.74	-1.1
2,259,485	-		MPMX19_02159	0.74	+0.1
2,259,485	-		MPMX19_02159	0.74	-0.3
2,259,485	-		MPMX19_02159	0.74	-1.1
2,259,485	-		MPMX19_02159	0.74	-0.5