Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02076

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,172,244	+		MPMX19_02074	0.81	-0.9
2,172,244	+		MPMX19_02074	0.81	+1.6
2,172,245	-		MPMX19_02074	0.81	-0.9
2,172,245	-		MPMX19_02074	0.81	+2.6
2,172,245	-		MPMX19_02074	0.81	-0.3
2,172,378	+				-2.1
2,172,378	+				+0.6
2,172,378	+				+0.2
2,172,378	+				-0.6
2,172,378	+				+1.0
2,172,378	+				-1.8
2,172,378	+				+1.6
2,172,378	+				+0.6
2,172,378	+				-1.8
2,172,378	+				+1.0
2,172,378	+				-2.4
2,172,378	+				-1.3
2,172,379	+				+0.6
2,172,379	-				-1.8
2,172,379	-				+0.1
2,172,379	-				+0.1
2,172,379	-				-2.0
2,172,379	-				-1.0
2,172,379	-				+0.3
2,172,379	-				-1.4
2,172,379	-				+0.2
2,172,379	-				-0.2
2,172,379	-				-1.0
2,172,379	-				+0.4
2,172,379	-				+0.2
2,172,379	-				-0.4
2,172,379	-				+1.6
2,172,379	-				-0.0
2,172,379	-				+0.6
2,172,422	-				-0.8
2,172,565	-				+0.2
2,172,565	-				+1.4
2,172,565	-				-1.9
2,172,597	+				-1.1
2,172,597	+				-1.0
2,172,597	+				-0.9
2,172,597	+				-0.4
2,172,598	-				-0.4
2,172,598	-				-0.8
2,172,598	-				-1.8
2,172,598	-				-0.2
2,172,709	+		MPMX19_02075	0.17	-3.0
2,172,760	+		MPMX19_02075	0.26	-0.3
2,172,760	+		MPMX19_02075	0.26	-2.3
2,172,760	+		MPMX19_02075	0.26	-0.8
2,172,760	+		MPMX19_02075	0.26	-0.0
2,172,760	+		MPMX19_02075	0.26	-1.3
2,172,760	+		MPMX19_02075	0.26	-0.4
2,172,760	+		MPMX19_02075	0.26	+0.6
2,172,760	+		MPMX19_02075	0.26	-0.4
2,172,760	+		MPMX19_02075	0.26	+0.6
2,172,760	+		MPMX19_02075	0.26	-1.5
2,172,761	-		MPMX19_02075	0.27	-0.4
2,172,988	+		MPMX19_02075	0.68	-0.4
2,172,988	+		MPMX19_02075	0.68	-2.8
2,172,988	+		MPMX19_02075	0.68	-2.4
2,172,988	+		MPMX19_02075	0.68	-1.3
2,172,988	+		MPMX19_02075	0.68	-1.8
2,172,989	-		MPMX19_02075	0.68	+0.6
2,172,989	-		MPMX19_02075	0.68	-1.3
2,172,989	-		MPMX19_02075	0.68	-1.4
2,172,989	-		MPMX19_02075	0.68	-1.6
2,172,989	-		MPMX19_02075	0.68	-0.4
2,172,989	-		MPMX19_02075	0.68	-0.8
2,172,989	-		MPMX19_02075	0.68	+0.6
2,172,989	-		MPMX19_02075	0.68	+0.8
2,172,989	-		MPMX19_02075	0.68	-0.4
2,173,018	+		MPMX19_02075	0.74	+0.2
2,173,018	+		MPMX19_02075	0.74	-0.4
2,173,018	+		MPMX19_02075	0.74	-1.8
2,173,018	+		MPMX19_02075	0.74	-2.7
2,173,018	+		MPMX19_02075	0.74	-0.3
2,173,018	+		MPMX19_02075	0.74	-2.4
2,173,018	+		MPMX19_02075	0.74	-0.4
2,173,018	+		MPMX19_02075	0.74	-0.8
2,173,018	+		MPMX19_02075	0.74	-1.6
2,173,019	-		MPMX19_02075	0.74	-0.8
2,173,019	-		MPMX19_02075	0.74	-0.6
2,173,019	-		MPMX19_02075	0.74	+0.6
2,173,019	-		MPMX19_02075	0.74	-0.8
2,173,019	-		MPMX19_02075	0.74	-1.6
2,173,019	-		MPMX19_02075	0.74	-0.0
2,173,159	+				-0.8
2,173,159	+				-0.4
2,173,159	+				-0.7
2,173,160	-				-1.0
2,173,160	-				+1.2
2,173,160	-				-1.0
2,173,160	-				-0.6
2,173,298	+		MPMX19_02076	0.20	-0.3
2,173,298	+		MPMX19_02076	0.20	-1.3
2,173,298	+		MPMX19_02076	0.20	-0.3
2,173,299	-		MPMX19_02076	0.20	-2.6
2,173,299	-		MPMX19_02076	0.20	-0.8
2,173,299	-		MPMX19_02076	0.20	-1.5
2,173,299	-		MPMX19_02076	0.20	+0.5
2,173,299	-		MPMX19_02076	0.20	-0.0
2,173,299	-		MPMX19_02076	0.20	-0.8
2,173,299	-		MPMX19_02076	0.20	-1.0
2,173,667	+		MPMX19_02076	0.78	+1.1
2,173,667	+		MPMX19_02076	0.78	-0.5
2,173,667	+		MPMX19_02076	0.78	-1.0
2,173,667	+		MPMX19_02076	0.78	-2.9
2,173,667	+		MPMX19_02076	0.78	-0.8
2,173,667	+		MPMX19_02076	0.78	-0.8
2,173,667	+		MPMX19_02076	0.78	-1.0
2,173,667	+		MPMX19_02076	0.78	-1.3
2,173,667	+		MPMX19_02076	0.78	-1.6
2,173,667	+		MPMX19_02076	0.78	-0.5
2,173,667	+		MPMX19_02076	0.78	+0.5
2,173,667	+		MPMX19_02076	0.78	+1.5
2,173,667	+		MPMX19_02076	0.78	-0.5
2,173,667	+		MPMX19_02076	0.78	-0.0
2,173,667	+		MPMX19_02076	0.78	-1.8
2,173,667	+		MPMX19_02076	0.78	-0.6
2,173,667	+		MPMX19_02076	0.78	-1.0
2,173,667	+		MPMX19_02076	0.78	-2.0
2,173,667	+		MPMX19_02076	0.78	-2.1
2,173,667	+		MPMX19_02076	0.78	-0.0
2,173,667	+		MPMX19_02076	0.78	-2.2
2,173,667	+		MPMX19_02076	0.78	-1.0
2,173,667	+		MPMX19_02076	0.78	-0.5
2,173,667	+		MPMX19_02076	0.78	-1.6
2,173,667	+		MPMX19_02076	0.78	-0.5
2,173,667	+		MPMX19_02076	0.78	+0.2
2,173,667	+		MPMX19_02076	0.78	-0.0
2,173,667	+		MPMX19_02076	0.78	-2.6
2,173,668	-		MPMX19_02076	0.78	-0.0
2,173,668	-		MPMX19_02076	0.78	+0.2
2,173,668	-		MPMX19_02076	0.78	-0.8
2,173,668	-		MPMX19_02076	0.78	-0.8
2,173,668	-		MPMX19_02076	0.78	-1.3
2,173,668	-		MPMX19_02076	0.78	-0.2
2,173,668	-		MPMX19_02076	0.78	-0.5
2,173,668	-		MPMX19_02076	0.78	+2.1
2,173,668	-		MPMX19_02076	0.78	+0.2
2,173,668	-		MPMX19_02076	0.78	+0.7
2,173,668	-		MPMX19_02076	0.78	+1.0
2,173,668	-		MPMX19_02076	0.78	+0.2
2,173,668	-		MPMX19_02076	0.78	+1.5
2,173,668	-		MPMX19_02076	0.78	+0.5
2,173,668	-		MPMX19_02076	0.78	-0.0
2,173,668	-		MPMX19_02076	0.78	-1.7
2,173,668	-		MPMX19_02076	0.78	-1.8
2,173,763	+				-1.4
2,173,763	+				-0.8
2,173,763	+				-1.5
2,173,763	+				-0.5
2,173,763	+				-0.7
2,173,763	+				+0.5
2,173,763	+				+0.5
2,173,763	+				+0.7
2,173,764	-				-0.7
2,173,764	-				-0.6
2,173,764	-				-1.3
2,173,764	-				+0.5
2,173,883	+				-1.5
2,173,883	+				-0.8
2,173,884	-				-2.5
2,173,884	-				+0.5
2,173,932	+				+1.1
2,173,933	-				-1.6
2,173,939	-				-0.8
2,173,939	-				-0.6
2,173,939	-				-0.9
2,173,939	-				-3.0
2,173,939	-				+0.2
2,174,102	+				+1.5
2,174,111	+				-1.5
2,174,111	+				+0.9
2,174,111	+				-1.9
2,174,112	-				+0.5
2,174,112	-				-1.2
2,174,112	-				-0.2
2,174,112	-				+0.5
2,174,288	+		MPMX19_02077	0.12	-1.8
2,174,288	+		MPMX19_02077	0.12	-0.5
2,174,288	+		MPMX19_02077	0.12	-1.0
2,174,288	+		MPMX19_02077	0.12	+0.1
2,174,288	+		MPMX19_02077	0.12	-0.8
2,174,288	+		MPMX19_02077	0.12	-2.4
2,174,288	+		MPMX19_02077	0.12	-0.6
2,174,289	-		MPMX19_02077	0.12	-0.5
2,174,289	-		MPMX19_02077	0.12	+0.1
2,174,289	-		MPMX19_02077	0.12	+2.0
2,174,289	-		MPMX19_02077	0.12	-0.4
2,174,399	+		MPMX19_02077	0.19	+1.5
2,174,399	+		MPMX19_02077	0.19	+1.0
2,174,399	+		MPMX19_02077	0.19	+0.2
2,174,399	+		MPMX19_02077	0.19	-1.5
2,174,399	+		MPMX19_02077	0.19	+1.2
2,174,399	+		MPMX19_02077	0.19	-0.3
2,174,399	+		MPMX19_02077	0.19	-1.0
2,174,399	+		MPMX19_02077	0.19	-0.5
2,174,399	+		MPMX19_02077	0.19	-0.8
2,174,399	+		MPMX19_02077	0.19	+0.7
2,174,400	-		MPMX19_02077	0.19	-0.8
2,174,400	-		MPMX19_02077	0.19	-1.3
2,174,400	-		MPMX19_02077	0.19	-0.6
2,174,400	-		MPMX19_02077	0.19	-0.8
2,174,400	-		MPMX19_02077	0.19	-0.3
2,174,462	+		MPMX19_02077	0.23	-0.1
2,174,462	+		MPMX19_02077	0.23	-0.5
2,174,462	+		MPMX19_02077	0.23	+0.3
2,174,462	+		MPMX19_02077	0.23	-0.6
2,174,462	+		MPMX19_02077	0.23	-0.7
2,174,462	+		MPMX19_02077	0.23	-0.5
2,174,462	+		MPMX19_02077	0.23	-0.0
2,174,462	+		MPMX19_02077	0.23	-0.9
2,174,463	-		MPMX19_02077	0.23	-2.4
2,174,463	-		MPMX19_02077	0.23	+0.3
2,174,465	+		MPMX19_02077	0.23	-0.8
2,174,465	+		MPMX19_02077	0.23	+0.2
2,174,465	+		MPMX19_02077	0.23	-0.8
2,174,465	+		MPMX19_02077	0.23	-1.0
2,174,465	+		MPMX19_02077	0.23	-1.6
2,174,465	+		MPMX19_02077	0.23	+0.2
2,174,465	+		MPMX19_02077	0.23	-0.7
2,174,465	+		MPMX19_02077	0.23	-0.5
2,174,465	+		MPMX19_02077	0.23	-1.0
2,174,465	+		MPMX19_02077	0.23	-0.0
2,174,465	+		MPMX19_02077	0.23	+1.5
2,174,465	+		MPMX19_02077	0.23	-0.5
2,174,465	+		MPMX19_02077	0.23	-1.6
2,174,465	+		MPMX19_02077	0.23	-0.3
2,174,465	+		MPMX19_02077	0.23	+0.5
2,174,465	+		MPMX19_02077	0.23	+0.3
2,174,465	+		MPMX19_02077	0.23	+0.2
2,174,465	+		MPMX19_02077	0.23	-0.8
2,174,465	+		MPMX19_02077	0.23	+1.3
2,174,466	-		MPMX19_02077	0.23	-2.1
2,174,466	-		MPMX19_02077	0.23	-0.5
2,174,466	-		MPMX19_02077	0.23	-0.5
2,174,466	-		MPMX19_02077	0.23	-0.0
2,174,466	-		MPMX19_02077	0.23	-2.0
2,174,466	-		MPMX19_02077	0.23	+0.5
2,174,466	-		MPMX19_02077	0.23	-0.8
2,174,466	-		MPMX19_02077	0.23	+0.5
2,174,466	-		MPMX19_02077	0.23	-0.0
2,174,466	-		MPMX19_02077	0.23	-0.8
2,174,466	-		MPMX19_02077	0.23	-1.3
2,174,466	-		MPMX19_02077	0.23	+1.0
2,174,466	-		MPMX19_02077	0.23	-0.5
2,174,466	-		MPMX19_02077	0.23	+0.8
2,174,466	-		MPMX19_02077	0.23	-0.5
2,174,466	-		MPMX19_02077	0.23	-0.0