Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00471 and MPMX19_00472 are separated by 71 nucleotides MPMX19_00472 and MPMX19_00473 are separated by 312 nucleotides MPMX19_00473 and MPMX19_00474 are separated by 193 nucleotides
MPMX19_00471: MPMX19_00471 - hypothetical protein, at 469,857 to 470,780
_00471
MPMX19_00472: MPMX19_00472 - Protein HesB, heterocyst, at 470,852 to 471,247
_00472
MPMX19_00473: MPMX19_00473 - hypothetical protein, at 471,560 to 472,072
_00473
MPMX19_00474: MPMX19_00474 - N-ethylmaleimide reductase, at 472,266 to 473,396
_00474
Position (kb) 471
472
473 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 470.770 kb on + strand at 470.770 kb on + strand at 470.770 kb on + strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.771 kb on - strand at 470.865 kb on + strand at 470.865 kb on + strand at 470.865 kb on + strand at 470.866 kb on - strand at 470.866 kb on - strand at 470.866 kb on - strand at 470.866 kb on - strand at 471.129 kb on + strand, within MPMX19_00472 at 471.129 kb on + strand, within MPMX19_00472 at 471.129 kb on + strand, within MPMX19_00472 at 471.129 kb on + strand, within MPMX19_00472 at 471.129 kb on + strand, within MPMX19_00472 at 471.130 kb on - strand, within MPMX19_00472 at 471.130 kb on - strand, within MPMX19_00472 at 471.301 kb on + strand at 471.302 kb on - strand at 471.302 kb on - strand at 471.302 kb on - strand at 471.302 kb on - strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.490 kb on + strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.491 kb on - strand at 471.737 kb on + strand, within MPMX19_00473 at 471.737 kb on + strand, within MPMX19_00473 at 471.737 kb on + strand, within MPMX19_00473 at 471.738 kb on - strand, within MPMX19_00473 at 471.738 kb on - strand, within MPMX19_00473 at 471.738 kb on - strand, within MPMX19_00473 at 471.746 kb on + strand, within MPMX19_00473 at 471.747 kb on - strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.755 kb on + strand, within MPMX19_00473 at 471.756 kb on - strand, within MPMX19_00473 at 471.756 kb on - strand, within MPMX19_00473 at 471.756 kb on - strand, within MPMX19_00473 at 472.087 kb on + strand at 472.303 kb on + strand at 472.303 kb on + strand at 472.303 kb on + strand at 472.304 kb on - strand at 472.304 kb on - strand at 472.304 kb on - strand at 472.324 kb on + strand at 472.325 kb on - strand at 472.325 kb on - strand at 472.325 kb on - strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.327 kb on + strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.328 kb on - strand at 472.498 kb on + strand, within MPMX19_00474 at 472.498 kb on + strand, within MPMX19_00474 at 472.499 kb on - strand, within MPMX19_00474 at 472.499 kb on - strand, within MPMX19_00474 at 472.499 kb on - strand, within MPMX19_00474 at 472.499 kb on - strand, within MPMX19_00474 at 472.499 kb on - strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.585 kb on + strand, within MPMX19_00474 at 472.586 kb on - strand, within MPMX19_00474 at 472.586 kb on - strand, within MPMX19_00474 at 472.586 kb on - strand, within MPMX19_00474 at 472.586 kb on - strand, within MPMX19_00474 at 472.586 kb on - strand, within MPMX19_00474 at 472.586 kb on - strand, within MPMX19_00474 at 472.586 kb on - strand, within MPMX19_00474 at 472.774 kb on + strand, within MPMX19_00474 at 472.774 kb on + strand, within MPMX19_00474 at 472.774 kb on + strand, within MPMX19_00474 at 472.775 kb on - strand, within MPMX19_00474 at 472.775 kb on - strand, within MPMX19_00474 at 472.775 kb on - strand, within MPMX19_00474 at 472.775 kb on - strand, within MPMX19_00474 at 472.775 kb on - strand, within MPMX19_00474 at 472.825 kb on + strand, within MPMX19_00474 at 472.825 kb on + strand, within MPMX19_00474 at 472.825 kb on + strand, within MPMX19_00474 at 472.825 kb on + strand, within MPMX19_00474 at 472.826 kb on - strand, within MPMX19_00474 at 472.826 kb on - strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.975 kb on + strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474 at 472.976 kb on - strand, within MPMX19_00474
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 470,770 + +0.4 470,770 + -1.2 470,770 + -0.7 470,771 - -0.9 470,771 - -0.2 470,771 - -0.4 470,771 - -1.8 470,771 - -0.2 470,771 - -1.2 470,771 - -0.1 470,771 - +0.4 470,865 + +0.0 470,865 + +0.6 470,865 + -1.4 470,866 - -0.5 470,866 - -1.5 470,866 - +0.6 470,866 - -1.8 471,129 + MPMX19_00472 0.70 -0.7 471,129 + MPMX19_00472 0.70 -1.1 471,129 + MPMX19_00472 0.70 +0.0 471,129 + MPMX19_00472 0.70 +1.6 471,129 + MPMX19_00472 0.70 -0.7 471,130 - MPMX19_00472 0.70 +0.6 471,130 - MPMX19_00472 0.70 -1.0 471,301 + -2.4 471,302 - +0.0 471,302 - +0.4 471,302 - -1.1 471,302 - -0.7 471,490 + +0.3 471,490 + +0.6 471,490 + -0.4 471,490 + +1.0 471,490 + +1.0 471,490 + -0.7 471,491 - -0.4 471,491 - +1.0 471,491 - -1.2 471,491 - +0.3 471,491 - +0.3 471,491 - +1.6 471,491 - -0.2 471,491 - -1.4 471,491 - -1.0 471,737 + MPMX19_00473 0.35 +1.0 471,737 + MPMX19_00473 0.35 +1.0 471,737 + MPMX19_00473 0.35 -0.3 471,738 - MPMX19_00473 0.35 -0.4 471,738 - MPMX19_00473 0.35 +0.0 471,738 - MPMX19_00473 0.35 +0.4 471,746 + MPMX19_00473 0.36 -1.7 471,747 - MPMX19_00473 0.36 -0.1 471,755 + MPMX19_00473 0.38 -0.7 471,755 + MPMX19_00473 0.38 -0.5 471,755 + MPMX19_00473 0.38 -0.7 471,755 + MPMX19_00473 0.38 -1.2 471,755 + MPMX19_00473 0.38 +1.6 471,755 + MPMX19_00473 0.38 -0.2 471,756 - MPMX19_00473 0.38 +1.3 471,756 - MPMX19_00473 0.38 -1.2 471,756 - MPMX19_00473 0.38 +0.8 472,087 + -1.1 472,303 + +0.6 472,303 + +0.9 472,303 + -0.0 472,304 - +0.0 472,304 - +0.8 472,304 - -1.0 472,324 + -1.0 472,325 - -1.1 472,325 - -0.2 472,325 - -0.2 472,327 + -1.2 472,327 + +0.3 472,327 + -1.1 472,327 + -2.9 472,327 + +0.9 472,327 + -0.3 472,327 + -1.0 472,327 + +0.0 472,327 + +0.0 472,327 + -0.4 472,327 + -0.3 472,327 + -0.4 472,327 + -1.0 472,327 + +0.0 472,327 + -2.3 472,327 + +0.2 472,327 + -1.4 472,327 + -0.7 472,327 + +0.6 472,327 + -1.0 472,327 + -0.8 472,327 + +0.2 472,327 + -1.2 472,327 + -1.5 472,327 + -0.1 472,327 + -1.2 472,327 + -1.0 472,327 + +1.2 472,328 - -1.8 472,328 - +0.3 472,328 - -0.5 472,328 - -0.2 472,328 - -0.7 472,328 - -1.0 472,328 - -0.8 472,328 - +0.0 472,328 - -1.8 472,328 - -1.2 472,328 - -0.1 472,328 - -0.4 472,328 - +1.0 472,328 - -0.2 472,328 - -0.1 472,328 - +0.3 472,328 - +0.6 472,328 - +0.0 472,328 - +0.3 472,328 - +2.2 472,328 - +0.6 472,328 - +0.0 472,328 - +0.0 472,328 - +1.6 472,328 - +1.3 472,328 - -1.0 472,328 - +1.0 472,328 - -0.7 472,328 - +0.3 472,328 - -0.2 472,498 + MPMX19_00474 0.21 -1.5 472,498 + MPMX19_00474 0.21 +1.0 472,499 - MPMX19_00474 0.21 +0.0 472,499 - MPMX19_00474 0.21 -0.4 472,499 - MPMX19_00474 0.21 +0.0 472,499 - MPMX19_00474 0.21 -1.0 472,499 - MPMX19_00474 0.21 -0.5 472,585 + MPMX19_00474 0.28 -1.4 472,585 + MPMX19_00474 0.28 -0.5 472,585 + MPMX19_00474 0.28 +0.6 472,585 + MPMX19_00474 0.28 -0.4 472,585 + MPMX19_00474 0.28 -1.0 472,585 + MPMX19_00474 0.28 +0.6 472,585 + MPMX19_00474 0.28 +0.0 472,585 + MPMX19_00474 0.28 -2.3 472,585 + MPMX19_00474 0.28 +1.0 472,586 - MPMX19_00474 0.28 -0.9 472,586 - MPMX19_00474 0.28 +0.0 472,586 - MPMX19_00474 0.28 +0.0 472,586 - MPMX19_00474 0.28 +1.2 472,586 - MPMX19_00474 0.28 -0.9 472,586 - MPMX19_00474 0.28 +0.0 472,586 - MPMX19_00474 0.28 +0.3 472,774 + MPMX19_00474 0.45 -0.2 472,774 + MPMX19_00474 0.45 -1.2 472,774 + MPMX19_00474 0.45 +1.6 472,775 - MPMX19_00474 0.45 +0.0 472,775 - MPMX19_00474 0.45 +0.6 472,775 - MPMX19_00474 0.45 -0.2 472,775 - MPMX19_00474 0.45 -0.7 472,775 - MPMX19_00474 0.45 +0.0 472,825 + MPMX19_00474 0.49 -0.2 472,825 + MPMX19_00474 0.49 +1.6 472,825 + MPMX19_00474 0.49 -1.8 472,825 + MPMX19_00474 0.49 -0.5 472,826 - MPMX19_00474 0.50 -1.6 472,826 - MPMX19_00474 0.50 +0.6 472,975 + MPMX19_00474 0.63 -1.0 472,975 + MPMX19_00474 0.63 +0.1 472,975 + MPMX19_00474 0.63 -0.5 472,975 + MPMX19_00474 0.63 -0.7 472,975 + MPMX19_00474 0.63 -0.4 472,975 + MPMX19_00474 0.63 -1.7 472,975 + MPMX19_00474 0.63 +1.6 472,975 + MPMX19_00474 0.63 -0.2 472,975 + MPMX19_00474 0.63 -0.4 472,975 + MPMX19_00474 0.63 -0.1 472,975 + MPMX19_00474 0.63 -0.7 472,975 + MPMX19_00474 0.63 -0.4 472,976 - MPMX19_00474 0.63 +0.6 472,976 - MPMX19_00474 0.63 +0.6 472,976 - MPMX19_00474 0.63 -0.5 472,976 - MPMX19_00474 0.63 -0.1 472,976 - MPMX19_00474 0.63 -1.4 472,976 - MPMX19_00474 0.63 +0.0 472,976 - MPMX19_00474 0.63 +0.4 472,976 - MPMX19_00474 0.63 -1.4 472,976 - MPMX19_00474 0.63 -0.4 472,976 - MPMX19_00474 0.63 -0.8 472,976 - MPMX19_00474 0.63 -1.2 472,976 - MPMX19_00474 0.63 -0.7
Or see this region's nucleotide sequence