Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS16565

Experiment: Thymine 0.793 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07035 and A4249_RS16565 are separated by 84 nucleotidesA4249_RS16565 and A4249_RS07045 are separated by 295 nucleotidesA4249_RS07045 and A4249_RS07050 are separated by 75 nucleotides A4249_RS07035: A4249_RS07035 - S24 family peptidase, at 1,416,557 to 1,417,231 _RS07035 A4249_RS16565: A4249_RS16565 - hypothetical protein, at 1,417,316 to 1,417,564 _RS16565 A4249_RS07045: A4249_RS07045 - hypothetical protein, at 1,417,860 to 1,418,255 _RS07045 A4249_RS07050: A4249_RS07050 - hypothetical protein, at 1,418,331 to 1,418,708 _RS07050 Position (kb) 1417 1418Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1416.319 kb on + strandat 1416.319 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.321 kb on + strandat 1416.322 kb on - strandat 1416.322 kb on - strandat 1416.322 kb on - strandat 1416.322 kb on - strandat 1416.322 kb on - strandat 1416.322 kb on - strandat 1416.340 kb on + strandat 1416.340 kb on + strandat 1416.340 kb on + strandat 1416.340 kb on + strandat 1416.340 kb on + strandat 1416.340 kb on + strandat 1416.340 kb on + strandat 1416.340 kb on + strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.341 kb on - strandat 1416.352 kb on + strandat 1416.353 kb on - strandat 1416.353 kb on - strandat 1416.459 kb on + strandat 1416.459 kb on + strandat 1416.459 kb on + strandat 1416.459 kb on + strandat 1416.459 kb on + strandat 1416.460 kb on - strandat 1416.460 kb on - strandat 1416.460 kb on - strandat 1416.460 kb on - strandat 1416.480 kb on + strandat 1416.480 kb on + strandat 1416.481 kb on - strandat 1416.541 kb on + strandat 1416.542 kb on - strandat 1416.542 kb on - strandat 1416.553 kb on - strandat 1417.393 kb on - strand, within A4249_RS16565at 1417.436 kb on - strand, within A4249_RS16565at 1417.436 kb on - strand, within A4249_RS16565at 1417.485 kb on - strand, within A4249_RS16565at 1417.485 kb on - strand, within A4249_RS16565at 1417.525 kb on - strand, within A4249_RS16565at 1417.525 kb on - strand, within A4249_RS16565at 1417.525 kb on - strand, within A4249_RS16565at 1417.525 kb on - strand, within A4249_RS16565at 1417.728 kb on - strandat 1417.836 kb on - strandat 1417.836 kb on - strandat 1418.327 kb on - strandat 1418.404 kb on - strand, within A4249_RS07050at 1418.434 kb on - strand, within A4249_RS07050at 1418.434 kb on - strand, within A4249_RS07050at 1418.434 kb on - strand, within A4249_RS07050

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Per-strain Table

Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C)
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1,416,319 + -0.1
1,416,319 + -0.4
1,416,321 + -0.4
1,416,321 + -0.9
1,416,321 + +0.0
1,416,321 + -0.7
1,416,321 + +0.4
1,416,321 + -0.0
1,416,321 + -0.1
1,416,321 + -0.0
1,416,321 + -0.1
1,416,321 + -0.2
1,416,321 + -0.1
1,416,321 + +2.0
1,416,321 + -1.6
1,416,321 + -3.2
1,416,321 + -0.3
1,416,321 + -0.2
1,416,322 - -0.3
1,416,322 - -1.2
1,416,322 - +0.6
1,416,322 - -0.3
1,416,322 - -0.0
1,416,322 - -0.2
1,416,340 + +0.0
1,416,340 + +0.7
1,416,340 + -0.6
1,416,340 + -0.3
1,416,340 + -0.2
1,416,340 + -0.1
1,416,340 + -1.3
1,416,340 + +1.4
1,416,341 - -0.8
1,416,341 - -0.6
1,416,341 - -0.5
1,416,341 - +1.4
1,416,341 - -1.3
1,416,341 - +0.8
1,416,341 - -0.2
1,416,341 - +0.1
1,416,341 - -0.3
1,416,341 - -1.1
1,416,352 + -0.1
1,416,353 - -0.6
1,416,353 - -0.9
1,416,459 + +0.1
1,416,459 + -0.6
1,416,459 + -0.1
1,416,459 + -0.7
1,416,459 + -0.9
1,416,460 - +0.1
1,416,460 - +0.2
1,416,460 - +0.2
1,416,460 - -1.8
1,416,480 + -0.6
1,416,480 + -0.8
1,416,481 - +0.4
1,416,541 + -0.5
1,416,542 - -0.0
1,416,542 - -0.2
1,416,553 - -0.2
1,417,393 - A4249_RS16565 0.31 -1.5
1,417,436 - A4249_RS16565 0.48 +0.4
1,417,436 - A4249_RS16565 0.48 -0.4
1,417,485 - A4249_RS16565 0.68 -1.9
1,417,485 - A4249_RS16565 0.68 -0.8
1,417,525 - A4249_RS16565 0.84 -0.2
1,417,525 - A4249_RS16565 0.84 +0.6
1,417,525 - A4249_RS16565 0.84 -0.0
1,417,525 - A4249_RS16565 0.84 +0.1
1,417,728 - -0.1
1,417,836 - +0.1
1,417,836 - -1.1
1,418,327 - +2.0
1,418,404 - A4249_RS07050 0.19 -1.5
1,418,434 - A4249_RS07050 0.27 +0.3
1,418,434 - A4249_RS07050 0.27 -0.4
1,418,434 - A4249_RS07050 0.27 -0.6

Or see this region's nucleotide sequence