Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS07035 and A4249_RS16565 are separated by 84 nucleotides A4249_RS16565 and A4249_RS07045 are separated by 295 nucleotides A4249_RS07045 and A4249_RS07050 are separated by 75 nucleotides
A4249_RS07035: A4249_RS07035 - S24 family peptidase, at 1,416,557 to 1,417,231
_RS07035
A4249_RS16565: A4249_RS16565 - hypothetical protein, at 1,417,316 to 1,417,564
_RS16565
A4249_RS07045: A4249_RS07045 - hypothetical protein, at 1,417,860 to 1,418,255
_RS07045
A4249_RS07050: A4249_RS07050 - hypothetical protein, at 1,418,331 to 1,418,708
_RS07050
Position (kb)
1417
1418 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1416.319 kb on + strand at 1416.319 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.321 kb on + strand at 1416.322 kb on - strand at 1416.322 kb on - strand at 1416.322 kb on - strand at 1416.322 kb on - strand at 1416.322 kb on - strand at 1416.322 kb on - strand at 1416.340 kb on + strand at 1416.340 kb on + strand at 1416.340 kb on + strand at 1416.340 kb on + strand at 1416.340 kb on + strand at 1416.340 kb on + strand at 1416.340 kb on + strand at 1416.340 kb on + strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.341 kb on - strand at 1416.352 kb on + strand at 1416.353 kb on - strand at 1416.353 kb on - strand at 1416.459 kb on + strand at 1416.459 kb on + strand at 1416.459 kb on + strand at 1416.459 kb on + strand at 1416.459 kb on + strand at 1416.460 kb on - strand at 1416.460 kb on - strand at 1416.460 kb on - strand at 1416.460 kb on - strand at 1416.480 kb on + strand at 1416.480 kb on + strand at 1416.481 kb on - strand at 1416.541 kb on + strand at 1416.542 kb on - strand at 1416.542 kb on - strand at 1416.553 kb on - strand at 1417.393 kb on - strand, within A4249_RS16565 at 1417.436 kb on - strand, within A4249_RS16565 at 1417.436 kb on - strand, within A4249_RS16565 at 1417.485 kb on - strand, within A4249_RS16565 at 1417.485 kb on - strand, within A4249_RS16565 at 1417.525 kb on - strand, within A4249_RS16565 at 1417.525 kb on - strand, within A4249_RS16565 at 1417.525 kb on - strand, within A4249_RS16565 at 1417.525 kb on - strand, within A4249_RS16565 at 1417.728 kb on - strand at 1417.836 kb on - strand at 1417.836 kb on - strand at 1418.327 kb on - strand at 1418.404 kb on - strand, within A4249_RS07050 at 1418.434 kb on - strand, within A4249_RS07050 at 1418.434 kb on - strand, within A4249_RS07050 at 1418.434 kb on - strand, within A4249_RS07050
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 1,416,319 + -0.1 1,416,319 + -0.4 1,416,321 + -0.4 1,416,321 + -0.9 1,416,321 + +0.0 1,416,321 + -0.7 1,416,321 + +0.4 1,416,321 + -0.0 1,416,321 + -0.1 1,416,321 + -0.0 1,416,321 + -0.1 1,416,321 + -0.2 1,416,321 + -0.1 1,416,321 + +2.0 1,416,321 + -1.6 1,416,321 + -3.2 1,416,321 + -0.3 1,416,321 + -0.2 1,416,322 - -0.3 1,416,322 - -1.2 1,416,322 - +0.6 1,416,322 - -0.3 1,416,322 - -0.0 1,416,322 - -0.2 1,416,340 + +0.0 1,416,340 + +0.7 1,416,340 + -0.6 1,416,340 + -0.3 1,416,340 + -0.2 1,416,340 + -0.1 1,416,340 + -1.3 1,416,340 + +1.4 1,416,341 - -0.8 1,416,341 - -0.6 1,416,341 - -0.5 1,416,341 - +1.4 1,416,341 - -1.3 1,416,341 - +0.8 1,416,341 - -0.2 1,416,341 - +0.1 1,416,341 - -0.3 1,416,341 - -1.1 1,416,352 + -0.1 1,416,353 - -0.6 1,416,353 - -0.9 1,416,459 + +0.1 1,416,459 + -0.6 1,416,459 + -0.1 1,416,459 + -0.7 1,416,459 + -0.9 1,416,460 - +0.1 1,416,460 - +0.2 1,416,460 - +0.2 1,416,460 - -1.8 1,416,480 + -0.6 1,416,480 + -0.8 1,416,481 - +0.4 1,416,541 + -0.5 1,416,542 - -0.0 1,416,542 - -0.2 1,416,553 - -0.2 1,417,393 - A4249_RS16565 0.31 -1.5 1,417,436 - A4249_RS16565 0.48 +0.4 1,417,436 - A4249_RS16565 0.48 -0.4 1,417,485 - A4249_RS16565 0.68 -1.9 1,417,485 - A4249_RS16565 0.68 -0.8 1,417,525 - A4249_RS16565 0.84 -0.2 1,417,525 - A4249_RS16565 0.84 +0.6 1,417,525 - A4249_RS16565 0.84 -0.0 1,417,525 - A4249_RS16565 0.84 +0.1 1,417,728 - -0.1 1,417,836 - +0.1 1,417,836 - -1.1 1,418,327 - +2.0 1,418,404 - A4249_RS07050 0.19 -1.5 1,418,434 - A4249_RS07050 0.27 +0.3 1,418,434 - A4249_RS07050 0.27 -0.4 1,418,434 - A4249_RS07050 0.27 -0.6
Or see this region's nucleotide sequence