Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15630

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
3,159,461	+		A4249_RS15620	0.78	-0.5
3,159,461	+		A4249_RS15620	0.78	+0.5
3,159,461	+		A4249_RS15620	0.78	-0.9
3,159,461	+		A4249_RS15620	0.78	-0.8
3,159,462	-		A4249_RS15620	0.79	-0.2
3,159,462	-		A4249_RS15620	0.79	-1.0
3,159,475	+		A4249_RS15620	0.80	+0.3
3,159,475	+		A4249_RS15620	0.80	-0.1
3,159,476	-		A4249_RS15620	0.80	-0.3
3,159,476	-		A4249_RS15620	0.80	-1.2
3,159,476	-		A4249_RS15620	0.80	-0.6
3,159,476	-		A4249_RS15620	0.80	+0.7
3,159,476	-		A4249_RS15620	0.80	+0.2
3,159,476	-		A4249_RS15620	0.80	-0.3
3,159,494	+		A4249_RS15620	0.82	-0.4
3,159,494	+		A4249_RS15620	0.82	-0.3
3,159,494	+		A4249_RS15620	0.82	+0.4
3,159,495	-		A4249_RS15620	0.82	-0.3
3,159,495	-		A4249_RS15620	0.82	-1.0
3,159,495	-		A4249_RS15620	0.82	+1.1
3,159,572	+				+0.2
3,159,572	+				-0.1
3,159,572	+				-1.0
3,159,572	+				-1.1
3,159,573	-				-0.6
3,159,573	-				-1.1
3,159,573	-				-0.0
3,159,573	-				+0.1
3,159,573	-				-0.3
3,159,573	-				+0.4
3,159,617	+				-2.1
3,159,617	+				-0.4
3,159,618	-				-0.5
3,159,630	-				-0.4
3,159,630	-				+0.1
3,159,691	+				+0.2
3,159,691	+				-0.2
3,159,692	-				-1.3
3,159,692	-				+1.2
3,159,692	-				+0.0
3,159,844	+		A4249_RS15625	0.15	-0.0
3,159,845	-		A4249_RS15625	0.16	-0.5
3,159,946	+		A4249_RS15625	0.30	+0.1
3,159,946	+		A4249_RS15625	0.30	+0.3
3,159,946	+		A4249_RS15625	0.30	-0.4
3,159,946	+		A4249_RS15625	0.30	-0.1
3,160,123	+		A4249_RS15625	0.56	+0.3
3,160,123	+		A4249_RS15625	0.56	-0.4
3,160,123	+		A4249_RS15625	0.56	-0.5
3,160,124	-		A4249_RS15625	0.56	-0.3
3,160,124	-		A4249_RS15625	0.56	+0.1
3,160,124	-		A4249_RS15625	0.56	+0.2
3,160,204	+		A4249_RS15625	0.68	-0.3
3,160,204	+		A4249_RS15625	0.68	-1.0
3,160,204	+		A4249_RS15625	0.68	-0.9
3,160,204	+		A4249_RS15625	0.68	-0.3
3,160,204	+		A4249_RS15625	0.68	-1.2
3,160,204	+		A4249_RS15625	0.68	-0.1
3,160,205	-		A4249_RS15625	0.68	-0.3
3,160,339	+		A4249_RS15625	0.87	-0.9
3,160,459	+				+0.7
3,160,459	+				-0.8
3,160,459	+				+0.4
3,160,459	+				-0.9
3,160,459	+				+0.3
3,160,459	+				-0.6
3,160,459	+				-0.9
3,160,459	+				-0.3
3,160,460	-				-0.0
3,160,460	-				+0.5
3,160,460	-				+0.4
3,160,603	+				+0.1
3,160,710	+		A4249_RS15630	0.11	-0.2
3,160,710	+		A4249_RS15630	0.11	-0.4
3,160,710	+		A4249_RS15630	0.11	-0.4
3,160,710	+		A4249_RS15630	0.11	+0.7
3,160,710	+		A4249_RS15630	0.11	-0.2
3,160,710	+		A4249_RS15630	0.11	-1.5
3,160,711	-		A4249_RS15630	0.11	+0.0
3,160,711	-		A4249_RS15630	0.11	-0.5
3,160,711	-		A4249_RS15630	0.11	+0.9
3,160,711	-		A4249_RS15630	0.11	-0.6
3,160,711	-		A4249_RS15630	0.11	+0.4
3,160,746	+		A4249_RS15630	0.12	+0.5
3,160,746	+		A4249_RS15630	0.12	-0.0
3,160,974	+		A4249_RS15630	0.21	+0.4
3,160,975	-		A4249_RS15630	0.21	-1.6
3,160,975	-		A4249_RS15630	0.21	+0.0
3,161,052	+		A4249_RS15630	0.24	+0.8
3,161,315	+		A4249_RS15630	0.34	-0.2
3,161,316	-		A4249_RS15630	0.34	+0.1
3,161,316	-		A4249_RS15630	0.34	+0.4
3,161,316	-		A4249_RS15630	0.34	+0.1
3,161,725	-		A4249_RS15630	0.50	+0.3
3,161,725	-		A4249_RS15630	0.50	-0.2
3,161,725	-		A4249_RS15630	0.50	-0.4
3,161,751	+		A4249_RS15630	0.51	+1.7
3,161,752	-		A4249_RS15630	0.51	+0.1
3,161,752	-		A4249_RS15630	0.51	-0.2
3,161,752	-		A4249_RS15630	0.51	+0.3
3,161,832	+		A4249_RS15630	0.54	+0.1
3,161,832	+		A4249_RS15630	0.54	-1.2
3,161,832	+		A4249_RS15630	0.54	-0.5
3,161,833	-		A4249_RS15630	0.54	-0.4
3,161,833	-		A4249_RS15630	0.54	-0.3
3,161,833	-		A4249_RS15630	0.54	-2.0
3,161,833	-		A4249_RS15630	0.54	-0.5
3,161,833	-		A4249_RS15630	0.54	+0.2
3,161,833	-		A4249_RS15630	0.54	+0.8
3,162,392	+		A4249_RS15630	0.75	-0.0
3,162,392	+		A4249_RS15630	0.75	+0.4
3,162,393	-		A4249_RS15630	0.75	-0.5
3,162,393	-		A4249_RS15630	0.75	+0.3
3,162,531	+		A4249_RS15630	0.81	+0.3
3,162,531	+		A4249_RS15630	0.81	-0.6
3,162,531	+		A4249_RS15630	0.81	-0.1
3,162,531	+		A4249_RS15630	0.81	+0.2
3,162,531	+		A4249_RS15630	0.81	-0.3
3,162,531	+		A4249_RS15630	0.81	-1.3
3,162,531	+		A4249_RS15630	0.81	-0.3
3,162,531	+		A4249_RS15630	0.81	-0.3
3,162,531	+		A4249_RS15630	0.81	-0.6
3,162,531	+		A4249_RS15630	0.81	-0.0
3,162,531	+		A4249_RS15630	0.81	+0.1
3,162,531	+		A4249_RS15630	0.81	+0.3
3,162,531	+		A4249_RS15630	0.81	-0.5
3,162,532	-		A4249_RS15630	0.81	+0.8
3,162,532	-		A4249_RS15630	0.81	+0.4
3,162,532	-		A4249_RS15630	0.81	+0.5
3,162,532	-		A4249_RS15630	0.81	-0.6
3,162,532	-		A4249_RS15630	0.81	+0.9
3,162,532	-		A4249_RS15630	0.81	+0.2
3,162,532	-		A4249_RS15630	0.81	-0.1
3,162,532	-		A4249_RS15630	0.81	+0.3
3,162,728	+		A4249_RS15630	0.88	-0.6
3,162,728	+		A4249_RS15630	0.88	+0.3
3,162,729	-		A4249_RS15630	0.88	-1.1
3,162,789	+				+0.6
3,162,789	+				+0.9
3,162,790	-				-0.3
3,162,790	-				+1.1
3,162,790	-				-0.1
3,162,790	-				-0.1
3,163,005	+				-2.0
3,163,005	+				+0.3
3,163,005	+				+1.8
3,163,005	+				+0.2
3,163,005	+				-0.6
3,163,005	+				+0.4
3,163,005	+				-0.2
3,163,005	+				+0.9
3,163,006	-				+0.2
3,163,006	-				-0.1
3,163,006	-				+0.5
3,163,006	-				-0.6
3,163,006	-				-1.5
3,163,006	-				-0.5
3,163,006	-				-0.3
3,163,006	-				-0.1
3,163,060	+				-0.0
3,163,061	-				+0.6
3,163,207	+		A4249_RS15635	0.16	+0.1
3,163,287	+		A4249_RS15635	0.30	+0.6
3,163,287	+		A4249_RS15635	0.30	-0.3
3,163,288	-		A4249_RS15635	0.30	+0.5
3,163,288	-		A4249_RS15635	0.30	-0.1
3,163,458	+		A4249_RS15635	0.60	+0.2
3,163,459	-		A4249_RS15635	0.60	-0.6
3,163,494	+		A4249_RS15635	0.66	-0.6
3,163,494	+		A4249_RS15635	0.66	+0.3
3,163,494	+		A4249_RS15635	0.66	-0.2
3,163,494	+		A4249_RS15635	0.66	-0.3
3,163,494	+		A4249_RS15635	0.66	-1.6
3,163,495	-		A4249_RS15635	0.66	+0.1
3,163,495	-		A4249_RS15635	0.66	+0.3
3,163,495	-		A4249_RS15635	0.66	-0.3
3,163,624	-		A4249_RS15635	0.88	+0.0
3,163,725	+				+0.2
3,163,725	+				-0.1
3,163,741	+				-0.9
3,163,741	+				-0.2
3,163,741	+				-0.1
3,163,741	+				-0.8
3,163,742	-				-0.0
3,163,742	-				-0.2
3,163,742	-				+0.6
3,163,777	+		A4249_RS15640	0.11	+0.6
3,163,813	+		A4249_RS15640	0.16	+0.8
3,163,840	+		A4249_RS15640	0.19	+0.8
3,163,840	+		A4249_RS15640	0.19	+0.0
3,163,840	+		A4249_RS15640	0.19	+0.1
3,163,840	+		A4249_RS15640	0.19	-0.9
3,163,841	-		A4249_RS15640	0.20	-0.8
3,163,841	-		A4249_RS15640	0.20	+0.1
3,163,841	-		A4249_RS15640	0.20	-1.0
3,163,930	+		A4249_RS15640	0.32	+0.2
3,163,930	+		A4249_RS15640	0.32	-0.5
3,163,930	+		A4249_RS15640	0.32	-0.4
3,163,930	+		A4249_RS15640	0.32	+0.5
3,163,930	+		A4249_RS15640	0.32	+0.4
3,163,931	-		A4249_RS15640	0.32	-0.1
3,163,931	-		A4249_RS15640	0.32	-0.2
3,163,931	-		A4249_RS15640	0.32	-0.3
3,163,931	-		A4249_RS15640	0.32	-0.9
3,163,972	+		A4249_RS15640	0.38	-0.6
3,163,972	+		A4249_RS15640	0.38	-0.5
3,163,972	+		A4249_RS15640	0.38	+0.1
3,163,973	-		A4249_RS15640	0.38	+0.4
3,163,973	-		A4249_RS15640	0.38	-0.8
3,163,975	+		A4249_RS15640	0.38	+0.4
3,163,975	+		A4249_RS15640	0.38	+0.0
3,163,975	+		A4249_RS15640	0.38	-0.2
3,163,975	+		A4249_RS15640	0.38	+0.4
3,163,976	-		A4249_RS15640	0.38	+0.3
3,163,976	-		A4249_RS15640	0.38	+0.0
3,163,976	-		A4249_RS15640	0.38	+0.4