Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15185

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
3,068,221	+		A4249_RS15175	0.71	+0.4
3,068,221	+		A4249_RS15175	0.71	+1.3
3,068,221	+		A4249_RS15175	0.71	-0.5
3,068,221	+		A4249_RS15175	0.71	+0.0
3,068,222	-		A4249_RS15175	0.71	-0.6
3,068,222	-		A4249_RS15175	0.71	-0.1
3,068,222	-		A4249_RS15175	0.71	-1.0
3,068,222	-		A4249_RS15175	0.71	+0.1
3,068,222	-		A4249_RS15175	0.71	+0.1
3,068,222	-		A4249_RS15175	0.71	-0.4
3,068,222	-		A4249_RS15175	0.71	-0.5
3,068,222	-		A4249_RS15175	0.71	-0.1
3,068,243	-		A4249_RS15175	0.73	+0.0
3,068,244	+		A4249_RS15175	0.73	-0.2
3,068,244	+		A4249_RS15175	0.73	+0.0
3,068,244	+		A4249_RS15175	0.73	-0.8
3,068,244	+		A4249_RS15175	0.73	-0.4
3,068,245	-		A4249_RS15175	0.73	+0.3
3,068,245	-		A4249_RS15175	0.73	+0.1
3,068,245	-		A4249_RS15175	0.73	+0.6
3,068,245	-		A4249_RS15175	0.73	-0.6
3,068,245	-		A4249_RS15175	0.73	+0.0
3,068,245	-		A4249_RS15175	0.73	-0.4
3,068,245	-		A4249_RS15175	0.73	-0.6
3,068,245	-		A4249_RS15175	0.73	-0.2
3,068,302	+		A4249_RS15175	0.80	-0.6
3,068,302	+		A4249_RS15175	0.80	-0.5
3,068,302	+		A4249_RS15175	0.80	+0.1
3,068,302	+		A4249_RS15175	0.80	-1.6
3,068,302	+		A4249_RS15175	0.80	+0.1
3,068,303	-		A4249_RS15175	0.80	+0.2
3,068,303	-		A4249_RS15175	0.80	-0.4
3,068,303	-		A4249_RS15175	0.80	+0.0
3,068,303	-		A4249_RS15175	0.80	+0.1
3,068,303	-		A4249_RS15175	0.80	-0.2
3,068,303	-		A4249_RS15175	0.80	-0.6
3,068,311	+		A4249_RS15175	0.81	-0.4
3,068,311	+		A4249_RS15175	0.81	+0.3
3,068,311	+		A4249_RS15175	0.81	+0.3
3,068,449	+				-0.6
3,068,450	-				+0.6
3,068,485	+				-0.1
3,068,485	+				+0.1
3,068,485	+				+0.1
3,068,486	-				+0.8
3,068,486	-				-2.2
3,068,486	-				+0.9
3,068,486	-				-1.6
3,068,630	+		A4249_RS15180	0.15	-0.3
3,068,631	-		A4249_RS15180	0.15	+0.2
3,068,631	-		A4249_RS15180	0.15	-1.1
3,068,714	+		A4249_RS15180	0.35	-0.2
3,068,714	+		A4249_RS15180	0.35	+0.0
3,068,714	+		A4249_RS15180	0.35	-0.4
3,068,715	-		A4249_RS15180	0.35	+0.2
3,068,715	-		A4249_RS15180	0.35	-1.6
3,068,715	-		A4249_RS15180	0.35	-0.3
3,068,754	-		A4249_RS15180	0.44	-0.5
3,068,886	-		A4249_RS15180	0.76	-0.5
3,068,886	-		A4249_RS15180	0.76	+0.7
3,068,886	-		A4249_RS15180	0.76	-0.2
3,068,886	-		A4249_RS15180	0.76	-0.2
3,068,886	-		A4249_RS15180	0.76	-0.8
3,068,976	+				-0.5
3,068,976	+				+0.1
3,068,977	-				+0.3
3,068,977	-				+0.6
3,069,024	-				+1.0
3,069,024	-				+0.5
3,069,024	-				-0.3
3,069,024	-				-1.1
3,069,024	-				-1.1
3,069,024	-				+0.0
3,069,024	-				+0.7
3,069,114	+				+0.0
3,069,115	-				-0.3
3,069,126	+				+0.2
3,069,127	-				-0.1
3,069,129	+				+0.4
3,069,130	-				+0.5
3,069,177	-				-0.4
3,069,221	+				+0.1
3,069,221	+				-0.4
3,069,222	-				-0.8
3,069,222	-				+0.5
3,069,222	-				+0.3
3,069,536	+		A4249_RS15185	0.36	+0.5
3,069,536	+		A4249_RS15185	0.36	+0.1
3,069,536	+		A4249_RS15185	0.36	-0.1
3,069,536	+		A4249_RS15185	0.36	-1.1
3,069,537	-		A4249_RS15185	0.36	+1.0
3,069,851	+		A4249_RS15185	0.68	+0.8
3,069,851	+		A4249_RS15185	0.68	+0.2
3,069,851	+		A4249_RS15185	0.68	+0.6
3,069,851	+		A4249_RS15185	0.68	-0.4
3,069,851	+		A4249_RS15185	0.68	-0.1
3,069,852	-		A4249_RS15185	0.68	+0.1
3,069,852	-		A4249_RS15185	0.68	+0.3
3,069,852	-		A4249_RS15185	0.68	+0.1
3,069,852	-		A4249_RS15185	0.68	+0.4
3,069,852	-		A4249_RS15185	0.68	-0.6
3,069,852	-		A4249_RS15185	0.68	+1.5
3,069,852	-		A4249_RS15185	0.68	-0.7
3,069,852	-		A4249_RS15185	0.68	+0.2
3,069,852	-		A4249_RS15185	0.68	+1.2
3,069,852	-		A4249_RS15185	0.68	-0.2
3,070,017	-		A4249_RS15185	0.85	-1.6
3,070,017	-		A4249_RS15185	0.85	-0.2
3,070,133	+				-0.8
3,070,205	+				+0.0
3,070,205	+				+0.2
3,070,205	+				+0.3
3,070,206	-				-0.5
3,070,206	-				-0.3
3,070,206	-				+0.2
3,070,206	-				+0.5
3,070,501	+		A4249_RS15190	0.13	-0.3
3,070,501	+		A4249_RS15190	0.13	-0.5
3,070,501	+		A4249_RS15190	0.13	+0.1
3,070,501	+		A4249_RS15190	0.13	-0.3
3,070,501	+		A4249_RS15190	0.13	-1.3
3,070,501	+		A4249_RS15190	0.13	-0.0
3,070,501	+		A4249_RS15190	0.13	+0.2
3,070,501	+		A4249_RS15190	0.13	+0.1
3,070,501	+		A4249_RS15190	0.13	-0.9
3,070,501	+		A4249_RS15190	0.13	-0.0
3,070,502	-		A4249_RS15190	0.13	+1.1
3,070,502	-		A4249_RS15190	0.13	+1.5
3,070,502	-		A4249_RS15190	0.13	+0.2
3,070,502	-		A4249_RS15190	0.13	-0.3
3,070,507	+		A4249_RS15190	0.14	+0.2
3,070,507	+		A4249_RS15190	0.14	-0.1
3,070,507	+		A4249_RS15190	0.14	+0.7
3,070,507	+		A4249_RS15190	0.14	+0.1
3,070,507	+		A4249_RS15190	0.14	+0.2
3,070,507	+		A4249_RS15190	0.14	-0.3
3,070,507	+		A4249_RS15190	0.14	-0.5
3,070,507	+		A4249_RS15190	0.14	+0.0
3,070,507	+		A4249_RS15190	0.14	-0.3
3,070,507	+		A4249_RS15190	0.14	+1.0
3,070,507	+		A4249_RS15190	0.14	+0.5
3,070,508	-		A4249_RS15190	0.14	+0.0
3,070,508	-		A4249_RS15190	0.14	+0.5
3,070,508	-		A4249_RS15190	0.14	-0.5
3,070,508	-		A4249_RS15190	0.14	-0.2
3,070,508	-		A4249_RS15190	0.14	+0.5
3,070,508	-		A4249_RS15190	0.14	+0.0
3,070,508	-		A4249_RS15190	0.14	-1.9
3,070,508	-		A4249_RS15190	0.14	+0.6
3,070,508	-		A4249_RS15190	0.14	+0.3
3,070,508	-		A4249_RS15190	0.14	-0.0
3,070,508	-		A4249_RS15190	0.14	+0.0
3,070,508	-		A4249_RS15190	0.14	+0.2
3,070,508	-		A4249_RS15190	0.14	-0.2
3,070,508	-		A4249_RS15190	0.14	-0.6
3,070,508	-		A4249_RS15190	0.14	-0.0
3,070,508	-		A4249_RS15190	0.14	+0.3
3,070,508	-		A4249_RS15190	0.14	+0.4
3,070,508	-		A4249_RS15190	0.14	+0.5
3,070,508	-		A4249_RS15190	0.14	+0.4
3,070,508	-		A4249_RS15190	0.14	+0.4
3,070,657	+		A4249_RS15190	0.21	+0.3
3,070,657	+		A4249_RS15190	0.21	-0.6
3,070,657	+		A4249_RS15190	0.21	+0.9
3,070,658	-		A4249_RS15190	0.21	+0.2
3,070,658	-		A4249_RS15190	0.21	-0.0
3,070,658	-		A4249_RS15190	0.21	+0.2
3,070,660	+		A4249_RS15190	0.22	-0.4
3,070,661	-		A4249_RS15190	0.22	-0.1
3,070,661	-		A4249_RS15190	0.22	-0.2
3,070,699	+		A4249_RS15190	0.24	+0.7
3,070,700	-		A4249_RS15190	0.24	+0.9
3,070,700	-		A4249_RS15190	0.24	-0.8
3,070,711	+		A4249_RS15190	0.24	+0.2
3,070,712	-		A4249_RS15190	0.24	+0.0
3,070,712	-		A4249_RS15190	0.24	-0.2
3,070,723	+		A4249_RS15190	0.25	-0.2
3,070,723	+		A4249_RS15190	0.25	+0.1
3,070,723	+		A4249_RS15190	0.25	+0.2
3,070,724	-		A4249_RS15190	0.25	+0.1
3,070,724	-		A4249_RS15190	0.25	-1.4
3,070,724	-		A4249_RS15190	0.25	-0.5
3,070,724	-		A4249_RS15190	0.25	+0.5
3,070,724	-		A4249_RS15190	0.25	-0.2
3,070,724	-		A4249_RS15190	0.25	+0.5
3,070,724	-		A4249_RS15190	0.25	-0.4
3,070,754	-		A4249_RS15190	0.26	+0.3
3,070,754	-		A4249_RS15190	0.26	+0.2
3,070,754	-		A4249_RS15190	0.26	+0.1
3,070,993	+		A4249_RS15190	0.39	-0.5
3,071,123	-		A4249_RS15190	0.45	-0.2