Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12630 and A4249_RS12635 are separated by 1 nucleotides A4249_RS12635 and A4249_RS12640 overlap by 4 nucleotides A4249_RS12640 and A4249_RS12645 are separated by 93 nucleotides A4249_RS12645 and A4249_RS12650 are separated by 102 nucleotides
A4249_RS12630: A4249_RS12630 - right-handed parallel beta-helix repeat-containing protein, at 2,535,189 to 2,536,139
_RS12630
A4249_RS12635: A4249_RS12635 - phosphatase PAP2 family protein, at 2,536,141 to 2,536,938
_RS12635
A4249_RS12640: A4249_RS12640 - hypothetical protein, at 2,536,935 to 2,537,432
_RS12640
A4249_RS12645: A4249_RS12645 - ribonuclease, at 2,537,526 to 2,537,786
_RS12645
A4249_RS12650: A4249_RS12650 - LLM class flavin-dependent oxidoreductase, at 2,537,889 to 2,538,893
_RS12650
Position (kb)
2536
2537
2538 Strain fitness (log2 ratio)
-2
-1
0
1 at 2536.139 kb on + strand at 2536.425 kb on - strand, within A4249_RS12635 at 2536.425 kb on - strand, within A4249_RS12635 at 2536.425 kb on - strand, within A4249_RS12635 at 2536.663 kb on + strand, within A4249_RS12635 at 2536.663 kb on + strand, within A4249_RS12635 at 2536.663 kb on + strand, within A4249_RS12635 at 2536.663 kb on + strand, within A4249_RS12635 at 2536.663 kb on + strand, within A4249_RS12635 at 2536.664 kb on - strand, within A4249_RS12635 at 2537.041 kb on + strand, within A4249_RS12640 at 2537.111 kb on - strand, within A4249_RS12640 at 2537.274 kb on + strand, within A4249_RS12640 at 2537.275 kb on - strand, within A4249_RS12640 at 2537.528 kb on - strand at 2537.881 kb on + strand at 2537.882 kb on - strand at 2537.882 kb on - strand at 2537.997 kb on + strand, within A4249_RS12650 at 2537.997 kb on + strand, within A4249_RS12650 at 2537.997 kb on + strand, within A4249_RS12650 at 2537.997 kb on + strand, within A4249_RS12650 at 2537.998 kb on - strand, within A4249_RS12650 at 2538.029 kb on + strand, within A4249_RS12650 at 2538.030 kb on - strand, within A4249_RS12650 at 2538.030 kb on - strand, within A4249_RS12650 at 2538.030 kb on - strand, within A4249_RS12650 at 2538.030 kb on - strand, within A4249_RS12650 at 2538.030 kb on - strand, within A4249_RS12650 at 2538.030 kb on - strand, within A4249_RS12650 at 2538.255 kb on + strand, within A4249_RS12650 at 2538.255 kb on + strand, within A4249_RS12650 at 2538.255 kb on + strand, within A4249_RS12650 at 2538.256 kb on - strand, within A4249_RS12650 at 2538.432 kb on + strand, within A4249_RS12650
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 2,536,139 + -2.1 2,536,425 - A4249_RS12635 0.36 +0.4 2,536,425 - A4249_RS12635 0.36 +0.1 2,536,425 - A4249_RS12635 0.36 -0.3 2,536,663 + A4249_RS12635 0.65 -0.1 2,536,663 + A4249_RS12635 0.65 +0.2 2,536,663 + A4249_RS12635 0.65 -0.5 2,536,663 + A4249_RS12635 0.65 -0.3 2,536,663 + A4249_RS12635 0.65 -0.6 2,536,664 - A4249_RS12635 0.66 +0.8 2,537,041 + A4249_RS12640 0.21 +0.4 2,537,111 - A4249_RS12640 0.35 -0.5 2,537,274 + A4249_RS12640 0.68 +0.1 2,537,275 - A4249_RS12640 0.68 -0.4 2,537,528 - -0.6 2,537,881 + -0.5 2,537,882 - +0.4 2,537,882 - -0.5 2,537,997 + A4249_RS12650 0.11 -0.8 2,537,997 + A4249_RS12650 0.11 -0.9 2,537,997 + A4249_RS12650 0.11 +0.3 2,537,997 + A4249_RS12650 0.11 -0.2 2,537,998 - A4249_RS12650 0.11 -0.3 2,538,029 + A4249_RS12650 0.14 -0.8 2,538,030 - A4249_RS12650 0.14 +0.1 2,538,030 - A4249_RS12650 0.14 +0.5 2,538,030 - A4249_RS12650 0.14 +0.2 2,538,030 - A4249_RS12650 0.14 +0.9 2,538,030 - A4249_RS12650 0.14 -0.4 2,538,030 - A4249_RS12650 0.14 +0.4 2,538,255 + A4249_RS12650 0.36 -1.0 2,538,255 + A4249_RS12650 0.36 +0.1 2,538,255 + A4249_RS12650 0.36 -0.1 2,538,256 - A4249_RS12650 0.37 -0.6 2,538,432 + A4249_RS12650 0.54 +0.3
Or see this region's nucleotide sequence