Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS12420 and A4249_RS12425 are separated by 66 nucleotides A4249_RS12425 and A4249_RS12430 overlap by 4 nucleotides A4249_RS12430 and A4249_RS12435 are separated by 24 nucleotides
A4249_RS12420: A4249_RS12420 - TetR/AcrR family transcriptional regulator, at 2,492,540 to 2,493,181
_RS12420
A4249_RS12425: A4249_RS12425 - Smr/MutS family protein, at 2,493,248 to 2,493,829
_RS12425
A4249_RS12430: A4249_RS12430 - helix-turn-helix transcriptional regulator, at 2,493,826 to 2,494,065
_RS12430
A4249_RS12435: A4249_RS12435 - DUF2975 domain-containing protein, at 2,494,090 to 2,494,695
_RS12435
Position (kb)
2493
2494
2495 Strain fitness (log2 ratio)
-2
-1
0
1 at 2493.068 kb on + strand, within A4249_RS12420 at 2493.068 kb on + strand, within A4249_RS12420 at 2493.068 kb on + strand, within A4249_RS12420 at 2493.069 kb on - strand, within A4249_RS12420 at 2493.095 kb on + strand, within A4249_RS12420 at 2493.096 kb on - strand, within A4249_RS12420 at 2493.130 kb on + strand at 2493.131 kb on - strand at 2493.179 kb on + strand at 2493.179 kb on + strand at 2493.180 kb on - strand at 2493.180 kb on - strand at 2493.180 kb on - strand at 2493.180 kb on - strand at 2493.249 kb on + strand at 2493.249 kb on + strand at 2493.249 kb on + strand at 2493.250 kb on - strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.273 kb on + strand at 2493.274 kb on - strand at 2493.274 kb on - strand at 2493.274 kb on - strand at 2493.274 kb on - strand at 2493.680 kb on + strand, within A4249_RS12425 at 2493.680 kb on + strand, within A4249_RS12425 at 2493.681 kb on - strand, within A4249_RS12425 at 2493.681 kb on - strand, within A4249_RS12425 at 2493.681 kb on - strand, within A4249_RS12425 at 2493.681 kb on - strand, within A4249_RS12425 at 2493.681 kb on - strand, within A4249_RS12425 at 2493.681 kb on - strand, within A4249_RS12425 at 2494.076 kb on + strand at 2494.077 kb on - strand at 2494.077 kb on - strand at 2494.161 kb on + strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.162 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.563 kb on - strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.588 kb on + strand, within A4249_RS12435 at 2494.589 kb on - strand, within A4249_RS12435 at 2494.589 kb on - strand, within A4249_RS12435 at 2494.768 kb on + strand at 2494.768 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.770 kb on + strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.771 kb on - strand at 2494.935 kb on + strand at 2494.935 kb on + strand at 2494.935 kb on + strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.936 kb on - strand at 2494.960 kb on + strand at 2494.960 kb on + strand at 2494.961 kb on - strand at 2494.966 kb on - strand at 2495.058 kb on + strand at 2495.058 kb on + strand at 2495.059 kb on - strand at 2495.063 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 2,493,068 + A4249_RS12420 0.82 -0.0 2,493,068 + A4249_RS12420 0.82 +1.0 2,493,068 + A4249_RS12420 0.82 -1.3 2,493,069 - A4249_RS12420 0.82 +0.6 2,493,095 + A4249_RS12420 0.86 +1.0 2,493,096 - A4249_RS12420 0.87 +0.3 2,493,130 + -0.4 2,493,131 - -1.4 2,493,179 + -0.5 2,493,179 + -0.5 2,493,180 - -0.1 2,493,180 - +0.5 2,493,180 - -1.9 2,493,180 - +0.5 2,493,249 + -0.0 2,493,249 + +1.1 2,493,249 + -0.5 2,493,250 - -0.9 2,493,273 + -0.5 2,493,273 + -0.3 2,493,273 + -0.5 2,493,273 + -0.2 2,493,273 + +0.7 2,493,273 + +0.9 2,493,273 + +0.1 2,493,273 + +0.1 2,493,273 + +0.5 2,493,273 + -0.2 2,493,273 + +0.6 2,493,274 - +0.1 2,493,274 - -1.2 2,493,274 - +1.0 2,493,274 - +0.4 2,493,680 + A4249_RS12425 0.74 -0.2 2,493,680 + A4249_RS12425 0.74 -0.0 2,493,681 - A4249_RS12425 0.74 -0.7 2,493,681 - A4249_RS12425 0.74 +1.3 2,493,681 - A4249_RS12425 0.74 +0.1 2,493,681 - A4249_RS12425 0.74 +0.3 2,493,681 - A4249_RS12425 0.74 +0.4 2,493,681 - A4249_RS12425 0.74 +0.9 2,494,076 + -0.5 2,494,077 - +0.1 2,494,077 - -0.4 2,494,161 + A4249_RS12435 0.12 +1.7 2,494,162 - A4249_RS12435 0.12 +0.0 2,494,162 - A4249_RS12435 0.12 -0.3 2,494,162 - A4249_RS12435 0.12 -0.4 2,494,162 - A4249_RS12435 0.12 +1.0 2,494,162 - A4249_RS12435 0.12 +0.9 2,494,563 - A4249_RS12435 0.78 -1.3 2,494,563 - A4249_RS12435 0.78 -0.4 2,494,563 - A4249_RS12435 0.78 +0.3 2,494,563 - A4249_RS12435 0.78 +1.7 2,494,563 - A4249_RS12435 0.78 +0.4 2,494,563 - A4249_RS12435 0.78 -0.2 2,494,588 + A4249_RS12435 0.82 -0.0 2,494,588 + A4249_RS12435 0.82 +0.1 2,494,588 + A4249_RS12435 0.82 -0.0 2,494,588 + A4249_RS12435 0.82 +0.3 2,494,588 + A4249_RS12435 0.82 +0.9 2,494,588 + A4249_RS12435 0.82 -0.4 2,494,588 + A4249_RS12435 0.82 -0.0 2,494,588 + A4249_RS12435 0.82 -0.2 2,494,589 - A4249_RS12435 0.82 -0.0 2,494,589 - A4249_RS12435 0.82 -0.6 2,494,768 + -0.9 2,494,768 + -0.5 2,494,770 + +0.8 2,494,770 + -0.2 2,494,770 + +0.3 2,494,770 + -1.0 2,494,770 + +0.6 2,494,770 + +0.1 2,494,770 + +0.4 2,494,771 - +0.4 2,494,771 - -0.6 2,494,771 - -0.1 2,494,771 - -0.0 2,494,771 - +0.1 2,494,771 - +1.0 2,494,771 - -0.4 2,494,771 - -0.3 2,494,771 - -0.6 2,494,771 - +0.9 2,494,771 - -0.6 2,494,771 - -0.2 2,494,771 - +0.5 2,494,771 - -0.5 2,494,935 + -0.2 2,494,935 + -0.3 2,494,935 + +0.4 2,494,936 - +0.6 2,494,936 - +0.2 2,494,936 - -0.2 2,494,936 - +0.4 2,494,936 - +0.1 2,494,936 - -0.7 2,494,960 + +0.6 2,494,960 + +0.1 2,494,961 - +0.1 2,494,966 - +0.4 2,495,058 + -0.9 2,495,058 + -0.6 2,495,059 - -0.1 2,495,063 - -0.1
Or see this region's nucleotide sequence