Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS11980 and A4249_RS11985 are separated by 90 nucleotides A4249_RS11985 and A4249_RS11990 are separated by 46 nucleotides A4249_RS11990 and A4249_RS11995 overlap by 4 nucleotides
A4249_RS11980: A4249_RS11980 - amidohydrolase, at 2,406,061 to 2,407,362
_RS11980
A4249_RS11985: A4249_RS11985 - hypothetical protein, at 2,407,453 to 2,407,809
_RS11985
A4249_RS11990: A4249_RS11990 - SRPBCC domain-containing protein, at 2,407,856 to 2,408,296
_RS11990
A4249_RS11995: A4249_RS11995 - type II secretion system F family protein, at 2,408,293 to 2,409,270
_RS11995
Position (kb)
2407
2408 Strain fitness (log2 ratio)
-1
0
1 at 2406.478 kb on - strand, within A4249_RS11980 at 2406.512 kb on + strand, within A4249_RS11980 at 2406.513 kb on - strand, within A4249_RS11980 at 2406.708 kb on + strand, within A4249_RS11980 at 2406.708 kb on + strand, within A4249_RS11980 at 2406.708 kb on + strand, within A4249_RS11980 at 2406.708 kb on + strand, within A4249_RS11980 at 2406.709 kb on - strand, within A4249_RS11980 at 2406.709 kb on - strand, within A4249_RS11980 at 2406.709 kb on - strand, within A4249_RS11980 at 2406.709 kb on - strand, within A4249_RS11980 at 2406.726 kb on - strand, within A4249_RS11980 at 2406.726 kb on - strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.945 kb on + strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.946 kb on - strand, within A4249_RS11980 at 2406.984 kb on + strand, within A4249_RS11980 at 2406.984 kb on + strand, within A4249_RS11980 at 2406.984 kb on + strand, within A4249_RS11980 at 2406.994 kb on - strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.995 kb on + strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2406.996 kb on - strand, within A4249_RS11980 at 2407.588 kb on + strand, within A4249_RS11985 at 2407.588 kb on + strand, within A4249_RS11985 at 2407.589 kb on - strand, within A4249_RS11985 at 2407.589 kb on - strand, within A4249_RS11985 at 2408.401 kb on + strand, within A4249_RS11995 at 2408.401 kb on + strand, within A4249_RS11995 at 2408.401 kb on + strand, within A4249_RS11995 at 2408.401 kb on + strand, within A4249_RS11995 at 2408.402 kb on - strand, within A4249_RS11995 at 2408.492 kb on + strand, within A4249_RS11995 at 2408.492 kb on + strand, within A4249_RS11995 at 2408.492 kb on + strand, within A4249_RS11995 at 2408.493 kb on - strand, within A4249_RS11995 at 2408.493 kb on - strand, within A4249_RS11995 at 2408.567 kb on + strand, within A4249_RS11995 at 2408.567 kb on + strand, within A4249_RS11995 at 2408.567 kb on + strand, within A4249_RS11995 at 2408.591 kb on + strand, within A4249_RS11995 at 2408.591 kb on + strand, within A4249_RS11995 at 2408.592 kb on - strand, within A4249_RS11995 at 2408.592 kb on - strand, within A4249_RS11995 at 2408.592 kb on - strand, within A4249_RS11995 at 2408.592 kb on - strand, within A4249_RS11995 at 2408.783 kb on + strand, within A4249_RS11995 at 2408.784 kb on - strand, within A4249_RS11995 at 2408.784 kb on - strand, within A4249_RS11995 at 2408.798 kb on + strand, within A4249_RS11995 at 2408.798 kb on + strand, within A4249_RS11995 at 2408.798 kb on + strand, within A4249_RS11995 at 2408.799 kb on - strand, within A4249_RS11995 at 2408.799 kb on - strand, within A4249_RS11995 at 2408.799 kb on - strand, within A4249_RS11995 at 2408.799 kb on - strand, within A4249_RS11995 at 2408.799 kb on - strand, within A4249_RS11995 at 2408.799 kb on - strand, within A4249_RS11995 at 2408.799 kb on - strand, within A4249_RS11995 at 2408.799 kb on - strand, within A4249_RS11995
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 2,406,478 - A4249_RS11980 0.32 -1.6 2,406,512 + A4249_RS11980 0.35 +0.2 2,406,513 - A4249_RS11980 0.35 -0.4 2,406,708 + A4249_RS11980 0.50 -0.9 2,406,708 + A4249_RS11980 0.50 -0.3 2,406,708 + A4249_RS11980 0.50 -0.1 2,406,708 + A4249_RS11980 0.50 +0.6 2,406,709 - A4249_RS11980 0.50 -0.1 2,406,709 - A4249_RS11980 0.50 -0.1 2,406,709 - A4249_RS11980 0.50 +0.2 2,406,709 - A4249_RS11980 0.50 -0.4 2,406,726 - A4249_RS11980 0.51 +0.4 2,406,726 - A4249_RS11980 0.51 +0.4 2,406,945 + A4249_RS11980 0.68 -0.8 2,406,945 + A4249_RS11980 0.68 -1.1 2,406,945 + A4249_RS11980 0.68 +1.4 2,406,945 + A4249_RS11980 0.68 -1.6 2,406,945 + A4249_RS11980 0.68 +0.3 2,406,945 + A4249_RS11980 0.68 -0.8 2,406,945 + A4249_RS11980 0.68 -0.2 2,406,945 + A4249_RS11980 0.68 +0.5 2,406,945 + A4249_RS11980 0.68 +0.4 2,406,945 + A4249_RS11980 0.68 -0.3 2,406,946 - A4249_RS11980 0.68 +0.7 2,406,946 - A4249_RS11980 0.68 +0.1 2,406,946 - A4249_RS11980 0.68 +0.1 2,406,946 - A4249_RS11980 0.68 -0.1 2,406,946 - A4249_RS11980 0.68 -1.2 2,406,946 - A4249_RS11980 0.68 -0.1 2,406,946 - A4249_RS11980 0.68 +0.4 2,406,946 - A4249_RS11980 0.68 -0.4 2,406,946 - A4249_RS11980 0.68 -0.8 2,406,946 - A4249_RS11980 0.68 -0.4 2,406,984 + A4249_RS11980 0.71 -0.6 2,406,984 + A4249_RS11980 0.71 -1.0 2,406,984 + A4249_RS11980 0.71 -0.3 2,406,994 - A4249_RS11980 0.72 -0.2 2,406,995 + A4249_RS11980 0.72 -0.6 2,406,995 + A4249_RS11980 0.72 -1.5 2,406,995 + A4249_RS11980 0.72 +0.3 2,406,995 + A4249_RS11980 0.72 +0.3 2,406,995 + A4249_RS11980 0.72 -0.5 2,406,995 + A4249_RS11980 0.72 +0.2 2,406,995 + A4249_RS11980 0.72 -0.0 2,406,995 + A4249_RS11980 0.72 +0.0 2,406,995 + A4249_RS11980 0.72 -0.3 2,406,996 - A4249_RS11980 0.72 +0.2 2,406,996 - A4249_RS11980 0.72 +0.1 2,406,996 - A4249_RS11980 0.72 -0.8 2,406,996 - A4249_RS11980 0.72 +0.3 2,406,996 - A4249_RS11980 0.72 -0.4 2,406,996 - A4249_RS11980 0.72 -0.5 2,406,996 - A4249_RS11980 0.72 +0.2 2,406,996 - A4249_RS11980 0.72 +0.7 2,406,996 - A4249_RS11980 0.72 +0.6 2,406,996 - A4249_RS11980 0.72 +0.3 2,406,996 - A4249_RS11980 0.72 +0.8 2,406,996 - A4249_RS11980 0.72 -0.2 2,406,996 - A4249_RS11980 0.72 -1.4 2,406,996 - A4249_RS11980 0.72 +0.2 2,406,996 - A4249_RS11980 0.72 +0.3 2,406,996 - A4249_RS11980 0.72 -0.4 2,406,996 - A4249_RS11980 0.72 -0.3 2,406,996 - A4249_RS11980 0.72 -0.1 2,406,996 - A4249_RS11980 0.72 -0.2 2,406,996 - A4249_RS11980 0.72 +0.5 2,407,588 + A4249_RS11985 0.38 -0.2 2,407,588 + A4249_RS11985 0.38 -1.1 2,407,589 - A4249_RS11985 0.38 -0.2 2,407,589 - A4249_RS11985 0.38 -0.2 2,408,401 + A4249_RS11995 0.11 -0.8 2,408,401 + A4249_RS11995 0.11 -0.3 2,408,401 + A4249_RS11995 0.11 +0.2 2,408,401 + A4249_RS11995 0.11 -1.4 2,408,402 - A4249_RS11995 0.11 +0.2 2,408,492 + A4249_RS11995 0.20 -0.6 2,408,492 + A4249_RS11995 0.20 +1.1 2,408,492 + A4249_RS11995 0.20 +0.5 2,408,493 - A4249_RS11995 0.20 -0.5 2,408,493 - A4249_RS11995 0.20 -1.3 2,408,567 + A4249_RS11995 0.28 -1.3 2,408,567 + A4249_RS11995 0.28 -0.2 2,408,567 + A4249_RS11995 0.28 +1.6 2,408,591 + A4249_RS11995 0.30 -0.3 2,408,591 + A4249_RS11995 0.30 +0.5 2,408,592 - A4249_RS11995 0.31 -0.8 2,408,592 - A4249_RS11995 0.31 -0.5 2,408,592 - A4249_RS11995 0.31 -0.1 2,408,592 - A4249_RS11995 0.31 -0.9 2,408,783 + A4249_RS11995 0.50 +0.9 2,408,784 - A4249_RS11995 0.50 -0.6 2,408,784 - A4249_RS11995 0.50 -0.3 2,408,798 + A4249_RS11995 0.52 -1.0 2,408,798 + A4249_RS11995 0.52 -0.9 2,408,798 + A4249_RS11995 0.52 -1.1 2,408,799 - A4249_RS11995 0.52 -0.2 2,408,799 - A4249_RS11995 0.52 +0.7 2,408,799 - A4249_RS11995 0.52 -0.3 2,408,799 - A4249_RS11995 0.52 -0.2 2,408,799 - A4249_RS11995 0.52 +1.1 2,408,799 - A4249_RS11995 0.52 +0.3 2,408,799 - A4249_RS11995 0.52 -0.7 2,408,799 - A4249_RS11995 0.52 -0.3
Or see this region's nucleotide sequence