Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS09930

Experiment: Thymine 0.793 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thymine 0.793 mM (C)
1,984,679	+		A4249_RS09925	0.70	+1.2
1,984,679	+		A4249_RS09925	0.70	-0.1
1,984,679	+		A4249_RS09925	0.70	-0.1
1,984,679	+		A4249_RS09925	0.70	+0.5
1,984,680	-		A4249_RS09925	0.70	-0.2
1,984,680	-		A4249_RS09925	0.70	+0.3
1,984,680	-		A4249_RS09925	0.70	-1.5
1,984,877	+		A4249_RS09925	0.76	-0.5
1,984,878	-		A4249_RS09925	0.76	+0.2
1,985,117	+		A4249_RS09925	0.83	+0.8
1,985,117	+		A4249_RS09925	0.83	+0.6
1,985,117	+		A4249_RS09925	0.83	-0.5
1,985,117	+		A4249_RS09925	0.83	-0.6
1,985,117	+		A4249_RS09925	0.83	+0.3
1,985,118	-		A4249_RS09925	0.83	-0.9
1,985,118	-		A4249_RS09925	0.83	-0.1
1,985,118	-		A4249_RS09925	0.83	+0.1
1,985,118	-		A4249_RS09925	0.83	+0.5
1,985,118	-		A4249_RS09925	0.83	+0.2
1,985,118	-		A4249_RS09925	0.83	+0.0
1,985,118	-		A4249_RS09925	0.83	+0.1
1,985,118	-		A4249_RS09925	0.83	+0.1
1,985,195	+		A4249_RS09925	0.85	+0.5
1,985,196	-		A4249_RS09925	0.86	+0.1
1,985,196	-		A4249_RS09925	0.86	+0.1
1,985,196	-		A4249_RS09925	0.86	+0.4
1,985,196	-		A4249_RS09925	0.86	-0.9
1,985,196	-		A4249_RS09925	0.86	-0.0
1,985,205	+		A4249_RS09925	0.86	-0.5
1,985,206	-		A4249_RS09925	0.86	-0.6
1,985,207	+		A4249_RS09925	0.86	+0.4
1,985,207	+		A4249_RS09925	0.86	-0.2
1,985,207	+		A4249_RS09925	0.86	+1.1
1,985,207	+		A4249_RS09925	0.86	-2.6
1,985,207	+		A4249_RS09925	0.86	-0.4
1,985,207	+		A4249_RS09925	0.86	-1.1
1,985,207	+		A4249_RS09925	0.86	+0.2
1,985,207	+		A4249_RS09925	0.86	-0.3
1,985,207	+		A4249_RS09925	0.86	-0.2
1,985,207	+		A4249_RS09925	0.86	-0.0
1,985,208	-		A4249_RS09925	0.86	+0.3
1,985,208	-		A4249_RS09925	0.86	-0.1
1,985,208	-		A4249_RS09925	0.86	-1.1
1,985,208	-		A4249_RS09925	0.86	+0.0
1,985,208	-		A4249_RS09925	0.86	+0.1
1,985,208	-		A4249_RS09925	0.86	+0.5
1,985,214	+		A4249_RS09925	0.86	+0.2
1,985,435	+				+1.5
1,985,435	+				-0.4
1,985,435	+				+0.2
1,985,435	+				-1.0
1,985,435	+				-0.1
1,985,435	+				+0.4
1,985,435	+				-0.0
1,985,435	+				-0.6
1,985,435	+				-0.5
1,985,435	+				-0.7
1,985,435	+				-1.1
1,985,435	+				-0.1
1,985,435	+				-0.5
1,985,436	-				-1.1
1,985,436	-				-1.1
1,985,436	-				-0.8
1,985,436	-				+0.2
1,985,436	-				-0.2
1,985,436	-				+0.1
1,985,436	-				+0.3
1,985,436	-				-0.4
1,985,519	+				+0.3
1,985,561	+				-0.5
1,985,562	-				+0.8
1,985,664	+				-1.1
1,985,664	+				+0.2
1,985,664	+				+0.2
1,985,664	+				-0.1
1,985,665	-				-0.7
1,985,665	-				-0.1
1,985,676	-				+1.2
1,985,676	-				-0.2
1,985,999	+		A4249_RS09930	0.27	-0.3
1,985,999	+		A4249_RS09930	0.27	-0.6
1,985,999	+		A4249_RS09930	0.27	+0.3
1,985,999	+		A4249_RS09930	0.27	+0.3
1,985,999	+		A4249_RS09930	0.27	-0.1
1,986,000	-		A4249_RS09930	0.27	-0.2
1,986,000	-		A4249_RS09930	0.27	-0.1
1,986,146	+		A4249_RS09930	0.39	+0.1
1,986,146	+		A4249_RS09930	0.39	-0.8
1,986,146	+		A4249_RS09930	0.39	-1.0
1,986,146	+		A4249_RS09930	0.39	+0.6
1,986,147	-		A4249_RS09930	0.39	-3.7
1,986,147	-		A4249_RS09930	0.39	-1.1
1,986,147	-		A4249_RS09930	0.39	-0.0
1,986,212	+		A4249_RS09930	0.45	-0.2
1,986,212	+		A4249_RS09930	0.45	-0.3
1,986,212	+		A4249_RS09930	0.45	-1.0
1,986,213	-		A4249_RS09930	0.45	-0.9
1,986,213	-		A4249_RS09930	0.45	-1.1
1,986,213	-		A4249_RS09930	0.45	+0.5
1,986,213	-		A4249_RS09930	0.45	-1.3
1,986,213	-		A4249_RS09930	0.45	-0.3
1,986,213	-		A4249_RS09930	0.45	-0.5
1,986,213	-		A4249_RS09930	0.45	-0.3
1,986,377	+		A4249_RS09930	0.58	-0.0
1,986,377	+		A4249_RS09930	0.58	+0.3
1,986,377	+		A4249_RS09930	0.58	-1.0
1,986,378	-		A4249_RS09930	0.59	+0.1
1,986,378	-		A4249_RS09930	0.59	-0.7
1,986,467	+		A4249_RS09930	0.66	-0.3
1,986,467	+		A4249_RS09930	0.66	+0.1
1,986,467	+		A4249_RS09930	0.66	-0.4
1,986,467	+		A4249_RS09930	0.66	+0.4
1,986,468	-		A4249_RS09930	0.66	-1.5
1,986,468	-		A4249_RS09930	0.66	-0.7
1,986,669	+		A4249_RS09930	0.83	-1.4
1,986,669	+		A4249_RS09930	0.83	-0.8
1,986,669	+		A4249_RS09930	0.83	+0.2
1,986,669	+		A4249_RS09930	0.83	-0.2
1,986,669	+		A4249_RS09930	0.83	+0.2
1,986,669	+		A4249_RS09930	0.83	+0.4
1,986,669	+		A4249_RS09930	0.83	+0.4
1,986,670	-		A4249_RS09930	0.83	-0.2
1,986,670	-		A4249_RS09930	0.83	-0.1
1,986,670	-		A4249_RS09930	0.83	-0.3
1,986,670	-		A4249_RS09930	0.83	-0.1
1,986,670	-		A4249_RS09930	0.83	-1.1
1,986,670	-		A4249_RS09930	0.83	-0.3
1,986,670	-		A4249_RS09930	0.83	+0.7
1,986,670	-		A4249_RS09930	0.83	+0.2
1,986,670	-		A4249_RS09930	0.83	+0.4
1,986,670	-		A4249_RS09930	0.83	-0.4
1,986,671	+		A4249_RS09930	0.83	-0.3
1,986,671	+		A4249_RS09930	0.83	-0.4
1,986,671	+		A4249_RS09930	0.83	-1.5
1,986,672	-		A4249_RS09930	0.83	+0.4
1,986,672	-		A4249_RS09930	0.83	-0.4
1,986,769	+				-0.2
1,986,769	+				-0.2
1,986,769	+				+0.3
1,986,769	+				-0.9
1,986,770	-				-0.2
1,986,770	-				-0.3
1,986,770	-				+0.3
1,986,824	+				-0.3
1,986,824	+				+0.1
1,986,825	-				-0.5
1,986,899	+				-0.1
1,986,900	-				+0.4
1,986,900	-				+0.0
1,986,960	+				-0.0
1,986,960	+				+0.5
1,986,961	-				+0.1
1,987,006	+				+0.4
1,987,006	+				+0.1
1,987,006	+				+0.4
1,987,006	+				-0.4
1,987,006	+				-0.3
1,987,006	+				-0.0
1,987,006	+				-1.1
1,987,006	+				+0.2
1,987,007	-				+0.9
1,987,007	-				-0.5
1,987,012	-				+0.4
1,987,015	+				+0.4
1,987,015	+				+0.0
1,987,015	+				+0.1
1,987,015	+				-2.3
1,987,015	+				-0.4
1,987,015	+				+0.0
1,987,015	+				-0.1
1,987,015	+				+0.3
1,987,016	-				+0.6
1,987,016	-				+0.3
1,987,016	-				+0.1
1,987,016	-				-0.2
1,987,016	-				+0.8
1,987,035	+				-1.3
1,987,035	+				-0.4
1,987,049	+				+0.4
1,987,049	+				+0.3
1,987,049	+				+0.4
1,987,049	+				-0.3
1,987,049	+				-0.0
1,987,049	+				+0.7
1,987,049	+				+0.1
1,987,049	+				+0.2
1,987,049	+				-1.8
1,987,049	+				+0.4
1,987,049	+				-0.1
1,987,050	-				+1.0
1,987,050	-				-0.9
1,987,050	-				-0.1
1,987,764	+				-1.0
1,987,764	+				-0.5
1,987,764	+				-0.9
1,987,820	-		A4249_RS09940	0.11	-1.5