Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16565 and A4249_RS07045 are separated by 295 nucleotides A4249_RS07045 and A4249_RS07050 are separated by 75 nucleotides A4249_RS07050 and A4249_RS07055 overlap by 4 nucleotides A4249_RS07055 and A4249_RS16570 are separated by 2 nucleotides A4249_RS16570 and A4249_RS16575 overlap by 4 nucleotides A4249_RS16575 and A4249_RS07060 are separated by 81 nucleotides
A4249_RS16565: A4249_RS16565 - hypothetical protein, at 1,417,316 to 1,417,564
_RS16565
A4249_RS07045: A4249_RS07045 - hypothetical protein, at 1,417,860 to 1,418,255
_RS07045
A4249_RS07050: A4249_RS07050 - hypothetical protein, at 1,418,331 to 1,418,708
_RS07050
A4249_RS07055: A4249_RS07055 - hypothetical protein, at 1,418,705 to 1,418,932
_RS07055
A4249_RS16570: A4249_RS16570 - hypothetical protein, at 1,418,935 to 1,419,240
_RS16570
A4249_RS16575: A4249_RS16575 - hypothetical protein, at 1,419,237 to 1,419,383
_RS16575
A4249_RS07060: A4249_RS07060 - single-stranded DNA-binding protein, at 1,419,465 to 1,419,917
_RS07060
Position (kb)
1418
1419 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1417.393 kb on - strand, within A4249_RS16565 at 1417.436 kb on - strand, within A4249_RS16565 at 1417.436 kb on - strand, within A4249_RS16565 at 1417.485 kb on - strand, within A4249_RS16565 at 1417.485 kb on - strand, within A4249_RS16565 at 1417.525 kb on - strand, within A4249_RS16565 at 1417.525 kb on - strand, within A4249_RS16565 at 1417.525 kb on - strand, within A4249_RS16565 at 1417.525 kb on - strand, within A4249_RS16565 at 1417.728 kb on - strand at 1417.836 kb on - strand at 1417.836 kb on - strand at 1418.327 kb on - strand at 1418.404 kb on - strand, within A4249_RS07050 at 1418.434 kb on - strand, within A4249_RS07050 at 1418.434 kb on - strand, within A4249_RS07050 at 1418.434 kb on - strand, within A4249_RS07050 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.000 kb on - strand, within A4249_RS16570 at 1419.104 kb on - strand, within A4249_RS16570 at 1419.104 kb on - strand, within A4249_RS16570 at 1419.104 kb on - strand, within A4249_RS16570 at 1419.104 kb on - strand, within A4249_RS16570 at 1419.104 kb on - strand, within A4249_RS16570 at 1419.104 kb on - strand, within A4249_RS16570
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 1,417,393 - A4249_RS16565 0.31 -1.5 1,417,436 - A4249_RS16565 0.48 +0.4 1,417,436 - A4249_RS16565 0.48 -0.4 1,417,485 - A4249_RS16565 0.68 -1.9 1,417,485 - A4249_RS16565 0.68 -0.8 1,417,525 - A4249_RS16565 0.84 -0.2 1,417,525 - A4249_RS16565 0.84 +0.6 1,417,525 - A4249_RS16565 0.84 -0.0 1,417,525 - A4249_RS16565 0.84 +0.1 1,417,728 - -0.1 1,417,836 - +0.1 1,417,836 - -1.1 1,418,327 - +2.0 1,418,404 - A4249_RS07050 0.19 -1.5 1,418,434 - A4249_RS07050 0.27 +0.3 1,418,434 - A4249_RS07050 0.27 -0.4 1,418,434 - A4249_RS07050 0.27 -0.6 1,419,000 - A4249_RS16570 0.21 -0.4 1,419,000 - A4249_RS16570 0.21 -0.3 1,419,000 - A4249_RS16570 0.21 +0.4 1,419,000 - A4249_RS16570 0.21 +0.4 1,419,000 - A4249_RS16570 0.21 -0.1 1,419,000 - A4249_RS16570 0.21 +1.0 1,419,000 - A4249_RS16570 0.21 -1.1 1,419,000 - A4249_RS16570 0.21 -2.3 1,419,000 - A4249_RS16570 0.21 -1.4 1,419,000 - A4249_RS16570 0.21 +0.8 1,419,000 - A4249_RS16570 0.21 +0.7 1,419,104 - A4249_RS16570 0.55 -0.2 1,419,104 - A4249_RS16570 0.55 -0.1 1,419,104 - A4249_RS16570 0.55 -0.0 1,419,104 - A4249_RS16570 0.55 -0.5 1,419,104 - A4249_RS16570 0.55 -0.4 1,419,104 - A4249_RS16570 0.55 -0.1
Or see this region's nucleotide sequence