Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03435 and A4249_RS03440 are separated by 9 nucleotides A4249_RS03440 and A4249_RS03445 overlap by 4 nucleotides A4249_RS03445 and A4249_RS03450 overlap by 8 nucleotides A4249_RS03450 and A4249_RS03455 are separated by 3 nucleotides A4249_RS03455 and A4249_RS03460 overlap by 4 nucleotides
A4249_RS03435: A4249_RS03435 - plasmid stabilization protein, at 719,595 to 719,900
_RS03435
A4249_RS03440: A4249_RS03440 - hypothetical protein, at 719,910 to 720,122
_RS03440
A4249_RS03445: A4249_RS03445 - hypothetical protein, at 720,119 to 720,325
_RS03445
A4249_RS03450: A4249_RS03450 - ferritin-like domain-containing protein, at 720,318 to 720,818
_RS03450
A4249_RS03455: A4249_RS03455 - cysteine hydrolase, at 720,822 to 721,424
_RS03455
A4249_RS03460: A4249_RS03460 - glycoside hydrolase family 65 protein, at 721,421 to 723,493
_RS03460
Position (kb) 720
721
722 Strain fitness (log2 ratio) -1
0
1
2 at 719.919 kb on + strand at 719.919 kb on + strand at 719.919 kb on + strand at 719.919 kb on + strand at 719.919 kb on + strand at 719.920 kb on - strand at 719.920 kb on - strand at 719.920 kb on - strand at 720.034 kb on + strand, within A4249_RS03440 at 720.034 kb on + strand, within A4249_RS03440 at 720.034 kb on + strand, within A4249_RS03440 at 720.035 kb on - strand, within A4249_RS03440 at 720.035 kb on - strand, within A4249_RS03440 at 720.035 kb on - strand, within A4249_RS03440 at 720.063 kb on + strand, within A4249_RS03440 at 720.348 kb on + strand at 720.348 kb on + strand at 720.348 kb on + strand at 720.348 kb on + strand at 720.348 kb on + strand at 720.348 kb on + strand at 720.349 kb on - strand at 720.349 kb on - strand at 720.349 kb on - strand at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.369 kb on + strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.370 kb on - strand, within A4249_RS03450 at 720.372 kb on + strand, within A4249_RS03450 at 720.588 kb on + strand, within A4249_RS03450 at 720.588 kb on + strand, within A4249_RS03450 at 720.588 kb on + strand, within A4249_RS03450 at 720.589 kb on - strand, within A4249_RS03450 at 720.589 kb on - strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.648 kb on + strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.649 kb on - strand, within A4249_RS03450 at 720.664 kb on - strand, within A4249_RS03450 at 720.664 kb on - strand, within A4249_RS03450 at 720.699 kb on + strand, within A4249_RS03450 at 720.934 kb on + strand, within A4249_RS03455 at 720.934 kb on + strand, within A4249_RS03455 at 721.041 kb on + strand, within A4249_RS03455 at 721.155 kb on + strand, within A4249_RS03455 at 721.155 kb on + strand, within A4249_RS03455 at 721.156 kb on - strand, within A4249_RS03455 at 721.284 kb on + strand, within A4249_RS03455 at 721.312 kb on + strand, within A4249_RS03455 at 721.312 kb on + strand, within A4249_RS03455 at 721.312 kb on + strand, within A4249_RS03455 at 721.356 kb on + strand, within A4249_RS03455 at 721.356 kb on + strand, within A4249_RS03455 at 721.357 kb on - strand, within A4249_RS03455 at 721.422 kb on + strand at 721.422 kb on + strand at 721.422 kb on + strand at 721.423 kb on - strand at 721.423 kb on - strand at 721.423 kb on - strand at 721.671 kb on + strand, within A4249_RS03460 at 721.705 kb on - strand, within A4249_RS03460 at 721.777 kb on - strand, within A4249_RS03460 at 721.777 kb on - strand, within A4249_RS03460 at 721.777 kb on - strand, within A4249_RS03460 at 721.806 kb on + strand, within A4249_RS03460 at 721.827 kb on + strand, within A4249_RS03460 at 721.827 kb on + strand, within A4249_RS03460 at 721.828 kb on - strand, within A4249_RS03460 at 721.828 kb on - strand, within A4249_RS03460 at 721.875 kb on + strand, within A4249_RS03460 at 721.876 kb on - strand, within A4249_RS03460 at 721.876 kb on - strand, within A4249_RS03460 at 722.251 kb on - strand, within A4249_RS03460
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 719,919 + +0.3 719,919 + -0.5 719,919 + -0.9 719,919 + -0.4 719,919 + +0.8 719,920 - -0.8 719,920 - -0.3 719,920 - +0.4 720,034 + A4249_RS03440 0.58 +1.3 720,034 + A4249_RS03440 0.58 +0.2 720,034 + A4249_RS03440 0.58 -0.0 720,035 - A4249_RS03440 0.59 +1.1 720,035 - A4249_RS03440 0.59 +0.1 720,035 - A4249_RS03440 0.59 -0.1 720,063 + A4249_RS03440 0.72 +0.3 720,348 + -0.9 720,348 + -1.5 720,348 + -0.6 720,348 + -0.7 720,348 + -0.5 720,348 + +0.2 720,349 - -0.3 720,349 - +0.4 720,349 - +0.5 720,369 + A4249_RS03450 0.10 -0.3 720,369 + A4249_RS03450 0.10 +0.7 720,369 + A4249_RS03450 0.10 +0.0 720,369 + A4249_RS03450 0.10 +0.4 720,369 + A4249_RS03450 0.10 -1.3 720,369 + A4249_RS03450 0.10 +0.4 720,369 + A4249_RS03450 0.10 -0.4 720,369 + A4249_RS03450 0.10 -0.5 720,369 + A4249_RS03450 0.10 -0.4 720,369 + A4249_RS03450 0.10 -1.6 720,369 + A4249_RS03450 0.10 +0.8 720,369 + A4249_RS03450 0.10 -0.4 720,369 + A4249_RS03450 0.10 +0.2 720,369 + A4249_RS03450 0.10 -0.3 720,369 + A4249_RS03450 0.10 -0.4 720,369 + A4249_RS03450 0.10 +0.1 720,369 + A4249_RS03450 0.10 -0.3 720,369 + A4249_RS03450 0.10 -0.0 720,369 + A4249_RS03450 0.10 +0.1 720,369 + A4249_RS03450 0.10 -0.0 720,369 + A4249_RS03450 0.10 -0.6 720,369 + A4249_RS03450 0.10 +0.1 720,370 - A4249_RS03450 0.10 -0.1 720,370 - A4249_RS03450 0.10 -0.2 720,370 - A4249_RS03450 0.10 +0.0 720,370 - A4249_RS03450 0.10 +0.6 720,370 - A4249_RS03450 0.10 +0.0 720,370 - A4249_RS03450 0.10 -0.2 720,370 - A4249_RS03450 0.10 +0.0 720,370 - A4249_RS03450 0.10 +0.1 720,370 - A4249_RS03450 0.10 -0.1 720,370 - A4249_RS03450 0.10 -0.2 720,370 - A4249_RS03450 0.10 +0.1 720,370 - A4249_RS03450 0.10 +0.6 720,370 - A4249_RS03450 0.10 +0.4 720,370 - A4249_RS03450 0.10 -0.3 720,370 - A4249_RS03450 0.10 -1.0 720,370 - A4249_RS03450 0.10 -0.3 720,370 - A4249_RS03450 0.10 -0.1 720,370 - A4249_RS03450 0.10 -0.1 720,370 - A4249_RS03450 0.10 +0.0 720,370 - A4249_RS03450 0.10 -0.3 720,370 - A4249_RS03450 0.10 -0.8 720,372 + A4249_RS03450 0.11 +0.2 720,588 + A4249_RS03450 0.54 -0.1 720,588 + A4249_RS03450 0.54 -0.8 720,588 + A4249_RS03450 0.54 +0.2 720,589 - A4249_RS03450 0.54 +0.6 720,589 - A4249_RS03450 0.54 +0.6 720,648 + A4249_RS03450 0.66 +0.7 720,648 + A4249_RS03450 0.66 +0.2 720,648 + A4249_RS03450 0.66 -0.1 720,648 + A4249_RS03450 0.66 +1.9 720,648 + A4249_RS03450 0.66 -0.7 720,649 - A4249_RS03450 0.66 +0.4 720,649 - A4249_RS03450 0.66 -1.1 720,649 - A4249_RS03450 0.66 -0.2 720,649 - A4249_RS03450 0.66 +0.9 720,649 - A4249_RS03450 0.66 -0.3 720,649 - A4249_RS03450 0.66 +1.5 720,649 - A4249_RS03450 0.66 +0.0 720,649 - A4249_RS03450 0.66 +0.1 720,664 - A4249_RS03450 0.69 +0.4 720,664 - A4249_RS03450 0.69 -0.0 720,699 + A4249_RS03450 0.76 +0.3 720,934 + A4249_RS03455 0.19 -0.3 720,934 + A4249_RS03455 0.19 +0.0 721,041 + A4249_RS03455 0.36 -0.2 721,155 + A4249_RS03455 0.55 -0.1 721,155 + A4249_RS03455 0.55 -0.4 721,156 - A4249_RS03455 0.55 +0.3 721,284 + A4249_RS03455 0.77 -0.7 721,312 + A4249_RS03455 0.81 -1.1 721,312 + A4249_RS03455 0.81 -0.8 721,312 + A4249_RS03455 0.81 -0.1 721,356 + A4249_RS03455 0.89 +0.1 721,356 + A4249_RS03455 0.89 +0.2 721,357 - A4249_RS03455 0.89 +0.0 721,422 + +0.3 721,422 + -0.2 721,422 + +0.0 721,423 - -0.1 721,423 - -0.9 721,423 - -0.2 721,671 + A4249_RS03460 0.12 -0.3 721,705 - A4249_RS03460 0.14 -0.5 721,777 - A4249_RS03460 0.17 +0.2 721,777 - A4249_RS03460 0.17 +0.3 721,777 - A4249_RS03460 0.17 -0.4 721,806 + A4249_RS03460 0.19 -0.4 721,827 + A4249_RS03460 0.20 -0.3 721,827 + A4249_RS03460 0.20 +0.8 721,828 - A4249_RS03460 0.20 -1.3 721,828 - A4249_RS03460 0.20 -0.0 721,875 + A4249_RS03460 0.22 -0.2 721,876 - A4249_RS03460 0.22 -0.5 721,876 - A4249_RS03460 0.22 +0.4 722,251 - A4249_RS03460 0.40 +0.4
Or see this region's nucleotide sequence