Experiment: Thymine 0.793 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02855 and A4249_RS02860 are separated by 96 nucleotides A4249_RS02860 and A4249_RS02865 overlap by 1 nucleotides A4249_RS02865 and A4249_RS02870 are separated by 21 nucleotides
A4249_RS02855: A4249_RS02855 - hydrolase, at 604,859 to 606,109
_RS02855
A4249_RS02860: A4249_RS02860 - hypothetical protein, at 606,206 to 606,748
_RS02860
A4249_RS02865: A4249_RS02865 - arsenate reductase family protein, at 606,748 to 607,089
_RS02865
A4249_RS02870: A4249_RS02870 - translocation/assembly module TamB domain-containing protein, at 607,111 to 611,349
_RS02870
Position (kb) 606
607
608 Strain fitness (log2 ratio) -2
-1
0
1
2 at 605.758 kb on + strand, within A4249_RS02855 at 605.759 kb on - strand, within A4249_RS02855 at 605.759 kb on - strand, within A4249_RS02855 at 605.802 kb on + strand, within A4249_RS02855 at 605.813 kb on - strand, within A4249_RS02855 at 606.121 kb on + strand at 606.122 kb on - strand at 606.122 kb on - strand at 606.158 kb on + strand at 606.158 kb on + strand at 606.158 kb on + strand at 606.159 kb on - strand at 606.159 kb on - strand at 606.159 kb on - strand at 606.179 kb on + strand at 606.180 kb on - strand at 606.395 kb on + strand, within A4249_RS02860 at 606.503 kb on + strand, within A4249_RS02860 at 606.503 kb on + strand, within A4249_RS02860 at 606.578 kb on + strand, within A4249_RS02860 at 606.578 kb on + strand, within A4249_RS02860 at 606.579 kb on - strand, within A4249_RS02860 at 606.579 kb on - strand, within A4249_RS02860 at 606.579 kb on - strand, within A4249_RS02860 at 606.579 kb on - strand, within A4249_RS02860 at 606.581 kb on - strand, within A4249_RS02860 at 606.581 kb on - strand, within A4249_RS02860 at 606.581 kb on - strand, within A4249_RS02860 at 606.692 kb on + strand, within A4249_RS02860 at 606.692 kb on + strand, within A4249_RS02860 at 606.692 kb on + strand, within A4249_RS02860 at 606.692 kb on + strand, within A4249_RS02860 at 606.692 kb on + strand, within A4249_RS02860 at 606.692 kb on + strand, within A4249_RS02860 at 606.692 kb on + strand, within A4249_RS02860 at 606.693 kb on - strand, within A4249_RS02860 at 606.693 kb on - strand, within A4249_RS02860 at 606.693 kb on - strand, within A4249_RS02860 at 606.763 kb on + strand at 606.763 kb on + strand at 606.764 kb on - strand at 606.764 kb on - strand at 606.980 kb on - strand, within A4249_RS02865 at 606.981 kb on - strand, within A4249_RS02865 at 607.076 kb on + strand at 607.088 kb on - strand at 607.295 kb on + strand at 607.296 kb on - strand at 607.313 kb on + strand at 607.313 kb on + strand at 607.313 kb on + strand at 607.313 kb on + strand at 607.313 kb on + strand at 607.313 kb on + strand at 607.314 kb on - strand at 607.703 kb on + strand, within A4249_RS02870 at 607.717 kb on + strand, within A4249_RS02870 at 607.717 kb on + strand, within A4249_RS02870 at 607.717 kb on + strand, within A4249_RS02870 at 607.717 kb on + strand, within A4249_RS02870 at 607.718 kb on - strand, within A4249_RS02870 at 607.718 kb on - strand, within A4249_RS02870
Per-strain Table
Position Strand Gene LocusTag Fraction Thymine 0.793 mM (C) remove 605,758 + A4249_RS02855 0.72 -0.4 605,759 - A4249_RS02855 0.72 +0.2 605,759 - A4249_RS02855 0.72 -1.0 605,802 + A4249_RS02855 0.75 +0.8 605,813 - A4249_RS02855 0.76 +1.9 606,121 + +0.1 606,122 - +1.4 606,122 - -0.9 606,158 + -0.1 606,158 + -0.7 606,158 + -0.2 606,159 - -0.2 606,159 - -2.7 606,159 - -0.4 606,179 + -1.5 606,180 - -1.1 606,395 + A4249_RS02860 0.35 -0.5 606,503 + A4249_RS02860 0.55 +0.1 606,503 + A4249_RS02860 0.55 +0.4 606,578 + A4249_RS02860 0.69 +0.5 606,578 + A4249_RS02860 0.69 -0.5 606,579 - A4249_RS02860 0.69 +0.7 606,579 - A4249_RS02860 0.69 -0.4 606,579 - A4249_RS02860 0.69 -0.6 606,579 - A4249_RS02860 0.69 +0.2 606,581 - A4249_RS02860 0.69 +0.4 606,581 - A4249_RS02860 0.69 -0.6 606,581 - A4249_RS02860 0.69 -0.6 606,692 + A4249_RS02860 0.90 +0.8 606,692 + A4249_RS02860 0.90 +0.4 606,692 + A4249_RS02860 0.90 +0.0 606,692 + A4249_RS02860 0.90 -0.4 606,692 + A4249_RS02860 0.90 +1.1 606,692 + A4249_RS02860 0.90 +0.0 606,692 + A4249_RS02860 0.90 -0.8 606,693 - A4249_RS02860 0.90 -0.3 606,693 - A4249_RS02860 0.90 -0.6 606,693 - A4249_RS02860 0.90 +0.7 606,763 + +0.1 606,763 + -0.7 606,764 - -0.4 606,764 - -0.6 606,980 - A4249_RS02865 0.68 -0.8 606,981 - A4249_RS02865 0.68 +0.0 607,076 + +0.5 607,088 - -0.0 607,295 + +0.3 607,296 - +1.4 607,313 + -0.5 607,313 + +1.2 607,313 + -1.0 607,313 + +0.3 607,313 + -0.6 607,313 + -0.6 607,314 - +0.1 607,703 + A4249_RS02870 0.14 +0.3 607,717 + A4249_RS02870 0.14 -0.5 607,717 + A4249_RS02870 0.14 +1.3 607,717 + A4249_RS02870 0.14 -1.5 607,717 + A4249_RS02870 0.14 -1.9 607,718 - A4249_RS02870 0.14 +0.1 607,718 - A4249_RS02870 0.14 +0.6
Or see this region's nucleotide sequence