Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02832

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02831 and MPMX26_02832 are separated by 232 nucleotidesMPMX26_02832 and MPMX26_02833 are separated by 284 nucleotides MPMX26_02831: MPMX26_02831 - Metal cation efflux system protein CzcD, at 2,918,440 to 2,919,366 _02831 MPMX26_02832: MPMX26_02832 - Energy-dependent translational throttle protein EttA, at 2,919,599 to 2,921,260 _02832 MPMX26_02833: MPMX26_02833 - O-acetyl-L-homoserine sulfhydrylase, at 2,921,545 to 2,922,822 _02833 Position (kb) 2919 2920 2921 2922Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2918.649 kb on + strand, within MPMX26_02831at 2918.667 kb on - strand, within MPMX26_02831at 2918.826 kb on - strand, within MPMX26_02831at 2919.186 kb on - strand, within MPMX26_02831at 2919.426 kb on - strandat 2919.655 kb on - strandat 2919.655 kb on - strandat 2919.655 kb on - strandat 2919.655 kb on - strandat 2919.655 kb on - strandat 2919.659 kb on - strandat 2919.659 kb on - strandat 2919.677 kb on - strandat 2919.691 kb on - strandat 2919.851 kb on - strand, within MPMX26_02832at 2919.870 kb on - strand, within MPMX26_02832at 2919.870 kb on - strand, within MPMX26_02832at 2919.934 kb on - strand, within MPMX26_02832at 2919.957 kb on - strand, within MPMX26_02832at 2920.092 kb on - strand, within MPMX26_02832at 2920.115 kb on - strand, within MPMX26_02832at 2920.166 kb on - strand, within MPMX26_02832at 2920.180 kb on - strand, within MPMX26_02832at 2920.417 kb on - strand, within MPMX26_02832at 2920.757 kb on - strand, within MPMX26_02832at 2920.775 kb on - strand, within MPMX26_02832at 2920.813 kb on - strand, within MPMX26_02832at 2920.963 kb on - strand, within MPMX26_02832at 2920.963 kb on - strand, within MPMX26_02832at 2921.267 kb on - strandat 2921.272 kb on - strandat 2921.406 kb on - strandat 2921.621 kb on + strandat 2921.637 kb on + strandat 2921.666 kb on + strandat 2921.674 kb on - strand, within MPMX26_02833at 2921.721 kb on + strand, within MPMX26_02833at 2921.745 kb on + strand, within MPMX26_02833at 2921.745 kb on + strand, within MPMX26_02833at 2921.745 kb on + strand, within MPMX26_02833at 2921.745 kb on + strand, within MPMX26_02833at 2921.745 kb on + strand, within MPMX26_02833at 2921.745 kb on + strand, within MPMX26_02833at 2921.748 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.755 kb on + strand, within MPMX26_02833at 2921.763 kb on + strand, within MPMX26_02833at 2921.818 kb on + strand, within MPMX26_02833at 2921.818 kb on + strand, within MPMX26_02833at 2921.839 kb on + strand, within MPMX26_02833at 2921.839 kb on + strand, within MPMX26_02833at 2921.868 kb on + strand, within MPMX26_02833at 2921.868 kb on + strand, within MPMX26_02833at 2921.893 kb on + strand, within MPMX26_02833at 2921.920 kb on + strand, within MPMX26_02833at 2921.953 kb on + strand, within MPMX26_02833at 2921.953 kb on + strand, within MPMX26_02833at 2922.070 kb on + strand, within MPMX26_02833at 2922.072 kb on + strand, within MPMX26_02833at 2922.075 kb on + strand, within MPMX26_02833at 2922.087 kb on + strand, within MPMX26_02833at 2922.111 kb on + strand, within MPMX26_02833at 2922.177 kb on + strand, within MPMX26_02833at 2922.177 kb on + strand, within MPMX26_02833at 2922.185 kb on + strand, within MPMX26_02833at 2922.250 kb on + strand, within MPMX26_02833at 2922.250 kb on + strand, within MPMX26_02833

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,918,649 + MPMX26_02831 0.23 +2.7
2,918,667 - MPMX26_02831 0.24 -0.5
2,918,826 - MPMX26_02831 0.42 +0.4
2,919,186 - MPMX26_02831 0.80 -1.6
2,919,426 - +2.0
2,919,655 - -2.9
2,919,655 - -0.4
2,919,655 - -0.4
2,919,655 - -1.1
2,919,655 - -1.1
2,919,659 - -0.3
2,919,659 - -0.0
2,919,677 - -0.7
2,919,691 - -0.3
2,919,851 - MPMX26_02832 0.15 -1.1
2,919,870 - MPMX26_02832 0.16 -0.9
2,919,870 - MPMX26_02832 0.16 -0.6
2,919,934 - MPMX26_02832 0.20 -0.6
2,919,957 - MPMX26_02832 0.22 -1.1
2,920,092 - MPMX26_02832 0.30 -0.3
2,920,115 - MPMX26_02832 0.31 -0.6
2,920,166 - MPMX26_02832 0.34 -0.6
2,920,180 - MPMX26_02832 0.35 -0.3
2,920,417 - MPMX26_02832 0.49 +0.1
2,920,757 - MPMX26_02832 0.70 -0.3
2,920,775 - MPMX26_02832 0.71 -1.3
2,920,813 - MPMX26_02832 0.73 -0.3
2,920,963 - MPMX26_02832 0.82 -1.1
2,920,963 - MPMX26_02832 0.82 -0.9
2,921,267 - -0.1
2,921,272 - -0.3
2,921,406 - -1.1
2,921,621 + -0.7
2,921,637 + -0.4
2,921,666 + -1.4
2,921,674 - MPMX26_02833 0.10 -0.3
2,921,721 + MPMX26_02833 0.14 -0.0
2,921,745 + MPMX26_02833 0.16 -0.8
2,921,745 + MPMX26_02833 0.16 +0.6
2,921,745 + MPMX26_02833 0.16 -0.3
2,921,745 + MPMX26_02833 0.16 -0.2
2,921,745 + MPMX26_02833 0.16 +0.6
2,921,745 + MPMX26_02833 0.16 +0.1
2,921,748 + MPMX26_02833 0.16 +0.1
2,921,755 + MPMX26_02833 0.16 +0.3
2,921,755 + MPMX26_02833 0.16 +0.2
2,921,755 + MPMX26_02833 0.16 +0.9
2,921,755 + MPMX26_02833 0.16 -0.6
2,921,755 + MPMX26_02833 0.16 -0.7
2,921,755 + MPMX26_02833 0.16 -0.2
2,921,755 + MPMX26_02833 0.16 +0.4
2,921,755 + MPMX26_02833 0.16 +0.6
2,921,755 + MPMX26_02833 0.16 -0.4
2,921,755 + MPMX26_02833 0.16 -0.1
2,921,755 + MPMX26_02833 0.16 -0.4
2,921,755 + MPMX26_02833 0.16 -0.0
2,921,755 + MPMX26_02833 0.16 -0.4
2,921,755 + MPMX26_02833 0.16 +0.2
2,921,763 + MPMX26_02833 0.17 +0.1
2,921,818 + MPMX26_02833 0.21 -0.3
2,921,818 + MPMX26_02833 0.21 +0.1
2,921,839 + MPMX26_02833 0.23 -1.4
2,921,839 + MPMX26_02833 0.23 +0.1
2,921,868 + MPMX26_02833 0.25 +0.1
2,921,868 + MPMX26_02833 0.25 -0.8
2,921,893 + MPMX26_02833 0.27 -0.1
2,921,920 + MPMX26_02833 0.29 +0.5
2,921,953 + MPMX26_02833 0.32 +0.2
2,921,953 + MPMX26_02833 0.32 -0.2
2,922,070 + MPMX26_02833 0.41 +0.5
2,922,072 + MPMX26_02833 0.41 -0.5
2,922,075 + MPMX26_02833 0.41 -0.2
2,922,087 + MPMX26_02833 0.42 +0.2
2,922,111 + MPMX26_02833 0.44 -0.3
2,922,177 + MPMX26_02833 0.49 +0.2
2,922,177 + MPMX26_02833 0.49 -0.2
2,922,185 + MPMX26_02833 0.50 +0.1
2,922,250 + MPMX26_02833 0.55 -0.2
2,922,250 + MPMX26_02833 0.55 +0.1

Or see this region's nucleotide sequence