Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02824

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02822 and MPMX26_02823 are separated by 10 nucleotidesMPMX26_02823 and MPMX26_02824 are separated by 11 nucleotidesMPMX26_02824 and MPMX26_02825 are separated by 201 nucleotides MPMX26_02822: MPMX26_02822 - Peptidoglycan D,D-transpeptidase FtsI, at 2,910,996 to 2,912,819 _02822 MPMX26_02823: MPMX26_02823 - Cell division protein FtsL, at 2,912,830 to 2,913,177 _02823 MPMX26_02824: MPMX26_02824 - Ribosomal RNA small subunit methyltransferase H, at 2,913,189 to 2,914,100 _02824 MPMX26_02825: MPMX26_02825 - Sulfate-binding protein, at 2,914,302 to 2,915,318 _02825 Position (kb) 2913 2914 2915Strain fitness (log2 ratio) -2 -1 0 1at 2913.194 kb on - strandat 2913.194 kb on - strandat 2913.199 kb on - strandat 2913.216 kb on - strandat 2913.216 kb on - strandat 2913.217 kb on - strandat 2913.231 kb on - strandat 2913.305 kb on - strand, within MPMX26_02824at 2913.332 kb on - strand, within MPMX26_02824at 2913.386 kb on - strand, within MPMX26_02824at 2913.402 kb on - strand, within MPMX26_02824at 2913.419 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.453 kb on - strand, within MPMX26_02824at 2913.473 kb on - strand, within MPMX26_02824at 2913.752 kb on - strand, within MPMX26_02824at 2913.861 kb on - strand, within MPMX26_02824at 2913.960 kb on - strand, within MPMX26_02824at 2914.017 kb on - strandat 2914.047 kb on - strandat 2914.085 kb on - strandat 2914.258 kb on - strandat 2914.313 kb on - strandat 2914.323 kb on - strandat 2914.323 kb on - strandat 2914.361 kb on - strandat 2914.361 kb on - strandat 2914.363 kb on + strandat 2914.363 kb on + strandat 2914.366 kb on - strandat 2914.368 kb on + strandat 2914.371 kb on - strandat 2914.371 kb on - strandat 2914.371 kb on - strandat 2914.371 kb on - strandat 2914.371 kb on - strandat 2914.371 kb on - strandat 2914.371 kb on - strandat 2914.376 kb on - strandat 2914.376 kb on - strandat 2914.383 kb on - strandat 2914.490 kb on - strand, within MPMX26_02825at 2914.496 kb on - strand, within MPMX26_02825at 2914.643 kb on - strand, within MPMX26_02825at 2914.660 kb on - strand, within MPMX26_02825at 2914.676 kb on - strand, within MPMX26_02825at 2914.676 kb on - strand, within MPMX26_02825at 2914.676 kb on - strand, within MPMX26_02825at 2914.684 kb on - strand, within MPMX26_02825at 2914.709 kb on + strand, within MPMX26_02825at 2914.721 kb on + strand, within MPMX26_02825at 2914.724 kb on - strand, within MPMX26_02825at 2914.729 kb on - strand, within MPMX26_02825at 2914.729 kb on - strand, within MPMX26_02825at 2914.734 kb on - strand, within MPMX26_02825at 2914.739 kb on - strand, within MPMX26_02825at 2914.739 kb on - strand, within MPMX26_02825at 2914.739 kb on - strand, within MPMX26_02825at 2914.766 kb on - strand, within MPMX26_02825at 2914.818 kb on - strand, within MPMX26_02825at 2914.818 kb on - strand, within MPMX26_02825at 2914.823 kb on - strand, within MPMX26_02825at 2914.823 kb on - strand, within MPMX26_02825at 2914.837 kb on - strand, within MPMX26_02825at 2914.837 kb on - strand, within MPMX26_02825at 2914.853 kb on - strand, within MPMX26_02825at 2914.863 kb on - strand, within MPMX26_02825at 2914.863 kb on - strand, within MPMX26_02825at 2914.863 kb on - strand, within MPMX26_02825at 2914.883 kb on - strand, within MPMX26_02825at 2914.886 kb on - strand, within MPMX26_02825at 2914.893 kb on + strand, within MPMX26_02825at 2914.896 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.901 kb on - strand, within MPMX26_02825at 2914.906 kb on - strand, within MPMX26_02825at 2914.911 kb on - strand, within MPMX26_02825at 2914.967 kb on - strand, within MPMX26_02825at 2914.967 kb on - strand, within MPMX26_02825at 2915.002 kb on + strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.010 kb on - strand, within MPMX26_02825at 2915.057 kb on - strand, within MPMX26_02825at 2915.057 kb on - strand, within MPMX26_02825at 2915.057 kb on - strand, within MPMX26_02825at 2915.057 kb on - strand, within MPMX26_02825at 2915.057 kb on - strand, within MPMX26_02825at 2915.057 kb on - strand, within MPMX26_02825at 2915.068 kb on - strand, within MPMX26_02825at 2915.068 kb on - strand, within MPMX26_02825at 2915.079 kb on + strand, within MPMX26_02825at 2915.092 kb on - strand, within MPMX26_02825

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,913,194 - -1.6
2,913,194 - +0.6
2,913,199 - +0.0
2,913,216 - -2.2
2,913,216 - -1.8
2,913,217 - +0.1
2,913,231 - -0.2
2,913,305 - MPMX26_02824 0.13 -0.3
2,913,332 - MPMX26_02824 0.16 -0.9
2,913,386 - MPMX26_02824 0.22 -1.0
2,913,402 - MPMX26_02824 0.23 -1.7
2,913,419 - MPMX26_02824 0.25 -0.7
2,913,453 - MPMX26_02824 0.29 -0.1
2,913,453 - MPMX26_02824 0.29 -0.7
2,913,453 - MPMX26_02824 0.29 -0.6
2,913,453 - MPMX26_02824 0.29 -0.9
2,913,453 - MPMX26_02824 0.29 -0.6
2,913,453 - MPMX26_02824 0.29 -0.4
2,913,473 - MPMX26_02824 0.31 -0.3
2,913,752 - MPMX26_02824 0.62 -0.6
2,913,861 - MPMX26_02824 0.74 -0.9
2,913,960 - MPMX26_02824 0.85 +1.1
2,914,017 - -1.5
2,914,047 - -0.4
2,914,085 - -2.3
2,914,258 - -0.7
2,914,313 - +0.1
2,914,323 - -0.1
2,914,323 - -0.2
2,914,361 - +0.4
2,914,361 - -0.8
2,914,363 + -0.3
2,914,363 + -0.7
2,914,366 - +0.2
2,914,368 + -1.4
2,914,371 - +0.1
2,914,371 - +0.2
2,914,371 - -0.1
2,914,371 - +0.2
2,914,371 - +0.1
2,914,371 - -1.3
2,914,371 - -0.3
2,914,376 - -0.0
2,914,376 - +0.1
2,914,383 - +0.1
2,914,490 - MPMX26_02825 0.18 -0.4
2,914,496 - MPMX26_02825 0.19 -0.2
2,914,643 - MPMX26_02825 0.34 +0.4
2,914,660 - MPMX26_02825 0.35 -0.7
2,914,676 - MPMX26_02825 0.37 -0.1
2,914,676 - MPMX26_02825 0.37 -0.1
2,914,676 - MPMX26_02825 0.37 -0.0
2,914,684 - MPMX26_02825 0.38 +0.4
2,914,709 + MPMX26_02825 0.40 -1.7
2,914,721 + MPMX26_02825 0.41 +0.6
2,914,724 - MPMX26_02825 0.41 -0.3
2,914,729 - MPMX26_02825 0.42 +0.1
2,914,729 - MPMX26_02825 0.42 -0.1
2,914,734 - MPMX26_02825 0.42 -0.3
2,914,739 - MPMX26_02825 0.43 +0.0
2,914,739 - MPMX26_02825 0.43 +0.1
2,914,739 - MPMX26_02825 0.43 +0.2
2,914,766 - MPMX26_02825 0.46 -0.1
2,914,818 - MPMX26_02825 0.51 +0.0
2,914,818 - MPMX26_02825 0.51 -0.1
2,914,823 - MPMX26_02825 0.51 -0.7
2,914,823 - MPMX26_02825 0.51 +0.3
2,914,837 - MPMX26_02825 0.53 +0.4
2,914,837 - MPMX26_02825 0.53 -0.3
2,914,853 - MPMX26_02825 0.54 +0.5
2,914,863 - MPMX26_02825 0.55 +0.2
2,914,863 - MPMX26_02825 0.55 +0.4
2,914,863 - MPMX26_02825 0.55 +0.1
2,914,883 - MPMX26_02825 0.57 -0.6
2,914,886 - MPMX26_02825 0.57 +0.3
2,914,893 + MPMX26_02825 0.58 -1.3
2,914,896 - MPMX26_02825 0.58 +0.2
2,914,901 - MPMX26_02825 0.59 -0.4
2,914,901 - MPMX26_02825 0.59 -0.2
2,914,901 - MPMX26_02825 0.59 -0.8
2,914,901 - MPMX26_02825 0.59 +0.1
2,914,901 - MPMX26_02825 0.59 -0.5
2,914,901 - MPMX26_02825 0.59 +0.1
2,914,901 - MPMX26_02825 0.59 +0.3
2,914,901 - MPMX26_02825 0.59 +0.1
2,914,901 - MPMX26_02825 0.59 -0.1
2,914,906 - MPMX26_02825 0.59 -0.4
2,914,911 - MPMX26_02825 0.60 -0.3
2,914,967 - MPMX26_02825 0.65 +1.0
2,914,967 - MPMX26_02825 0.65 -0.1
2,915,002 + MPMX26_02825 0.69 -0.9
2,915,010 - MPMX26_02825 0.70 +0.6
2,915,010 - MPMX26_02825 0.70 -1.3
2,915,010 - MPMX26_02825 0.70 -0.9
2,915,010 - MPMX26_02825 0.70 +0.0
2,915,010 - MPMX26_02825 0.70 +0.7
2,915,010 - MPMX26_02825 0.70 +0.1
2,915,010 - MPMX26_02825 0.70 +1.5
2,915,010 - MPMX26_02825 0.70 +0.1
2,915,010 - MPMX26_02825 0.70 +0.5
2,915,057 - MPMX26_02825 0.74 +0.1
2,915,057 - MPMX26_02825 0.74 -0.0
2,915,057 - MPMX26_02825 0.74 -0.7
2,915,057 - MPMX26_02825 0.74 -0.9
2,915,057 - MPMX26_02825 0.74 +0.5
2,915,057 - MPMX26_02825 0.74 +0.6
2,915,068 - MPMX26_02825 0.75 +0.1
2,915,068 - MPMX26_02825 0.75 -0.1
2,915,079 + MPMX26_02825 0.76 +0.3
2,915,092 - MPMX26_02825 0.78 +0.5

Or see this region's nucleotide sequence