Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02790

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02788 and MPMX26_02789 are separated by 21 nucleotidesMPMX26_02789 and MPMX26_02790 overlap by 1 nucleotidesMPMX26_02790 and MPMX26_02791 are separated by 0 nucleotidesMPMX26_02791 and MPMX26_02792 overlap by 4 nucleotides MPMX26_02788: MPMX26_02788 - hypothetical protein, at 2,870,044 to 2,873,964 _02788 MPMX26_02789: MPMX26_02789 - hypothetical protein, at 2,873,986 to 2,874,765 _02789 MPMX26_02790: MPMX26_02790 - hypothetical protein, at 2,874,765 to 2,875,814 _02790 MPMX26_02791: MPMX26_02791 - hypothetical protein, at 2,875,815 to 2,876,387 _02791 MPMX26_02792: MPMX26_02792 - hypothetical protein, at 2,876,384 to 2,876,815 _02792 Position (kb) 2874 2875 2876Strain fitness (log2 ratio) -1 0 1 2at 2873.798 kb on - strandat 2873.802 kb on - strandat 2873.806 kb on - strandat 2873.862 kb on - strandat 2873.876 kb on - strandat 2873.876 kb on - strandat 2873.900 kb on - strandat 2873.926 kb on - strandat 2873.928 kb on - strandat 2873.928 kb on - strandat 2873.971 kb on - strandat 2873.973 kb on - strandat 2874.007 kb on - strandat 2874.012 kb on - strandat 2874.012 kb on - strandat 2874.012 kb on - strandat 2874.012 kb on - strandat 2874.020 kb on - strandat 2874.027 kb on - strandat 2874.027 kb on - strandat 2874.027 kb on - strandat 2874.072 kb on - strand, within MPMX26_02789at 2874.072 kb on - strand, within MPMX26_02789at 2874.074 kb on - strand, within MPMX26_02789at 2874.094 kb on - strand, within MPMX26_02789at 2874.094 kb on - strand, within MPMX26_02789at 2874.094 kb on - strand, within MPMX26_02789at 2874.100 kb on - strand, within MPMX26_02789at 2874.219 kb on - strand, within MPMX26_02789at 2874.253 kb on - strand, within MPMX26_02789at 2874.253 kb on - strand, within MPMX26_02789at 2874.261 kb on - strand, within MPMX26_02789at 2874.343 kb on - strand, within MPMX26_02789at 2874.417 kb on - strand, within MPMX26_02789at 2874.439 kb on - strand, within MPMX26_02789at 2874.495 kb on - strand, within MPMX26_02789at 2874.495 kb on - strand, within MPMX26_02789at 2874.515 kb on + strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.523 kb on - strand, within MPMX26_02789at 2874.583 kb on - strand, within MPMX26_02789at 2874.636 kb on - strand, within MPMX26_02789at 2874.636 kb on - strand, within MPMX26_02789at 2874.636 kb on - strand, within MPMX26_02789at 2874.636 kb on - strand, within MPMX26_02789at 2874.636 kb on - strand, within MPMX26_02789at 2874.636 kb on - strand, within MPMX26_02789at 2874.636 kb on - strand, within MPMX26_02789at 2874.678 kb on - strand, within MPMX26_02789at 2874.726 kb on - strandat 2874.751 kb on - strandat 2874.771 kb on - strandat 2874.771 kb on - strandat 2874.792 kb on - strandat 2874.792 kb on - strandat 2874.792 kb on - strandat 2874.808 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.810 kb on - strandat 2874.839 kb on - strandat 2874.851 kb on - strandat 2874.950 kb on - strand, within MPMX26_02790at 2874.981 kb on - strand, within MPMX26_02790at 2874.981 kb on - strand, within MPMX26_02790at 2874.982 kb on - strand, within MPMX26_02790at 2874.989 kb on - strand, within MPMX26_02790at 2875.003 kb on - strand, within MPMX26_02790at 2875.003 kb on - strand, within MPMX26_02790at 2875.003 kb on - strand, within MPMX26_02790at 2875.004 kb on - strand, within MPMX26_02790at 2875.009 kb on - strand, within MPMX26_02790at 2875.102 kb on - strand, within MPMX26_02790at 2875.112 kb on - strand, within MPMX26_02790at 2875.126 kb on - strand, within MPMX26_02790at 2875.136 kb on - strand, within MPMX26_02790at 2875.143 kb on - strand, within MPMX26_02790at 2875.152 kb on - strand, within MPMX26_02790at 2875.181 kb on - strand, within MPMX26_02790at 2875.329 kb on - strand, within MPMX26_02790at 2875.356 kb on - strand, within MPMX26_02790at 2875.373 kb on - strand, within MPMX26_02790at 2875.405 kb on - strand, within MPMX26_02790at 2875.405 kb on - strand, within MPMX26_02790at 2875.417 kb on - strand, within MPMX26_02790at 2875.417 kb on - strand, within MPMX26_02790at 2875.428 kb on - strand, within MPMX26_02790at 2875.428 kb on - strand, within MPMX26_02790at 2875.428 kb on - strand, within MPMX26_02790at 2875.428 kb on - strand, within MPMX26_02790at 2875.433 kb on - strand, within MPMX26_02790at 2875.433 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.438 kb on - strand, within MPMX26_02790at 2875.460 kb on - strand, within MPMX26_02790at 2875.481 kb on - strand, within MPMX26_02790at 2875.481 kb on - strand, within MPMX26_02790at 2875.481 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.488 kb on - strand, within MPMX26_02790at 2875.506 kb on - strand, within MPMX26_02790at 2875.538 kb on - strand, within MPMX26_02790at 2875.550 kb on - strand, within MPMX26_02790at 2875.559 kb on - strand, within MPMX26_02790at 2875.559 kb on - strand, within MPMX26_02790at 2875.559 kb on - strand, within MPMX26_02790at 2875.559 kb on - strand, within MPMX26_02790at 2875.601 kb on - strand, within MPMX26_02790at 2875.789 kb on - strandat 2875.839 kb on - strandat 2875.839 kb on - strandat 2875.890 kb on - strand, within MPMX26_02791at 2875.890 kb on - strand, within MPMX26_02791at 2875.895 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.041 kb on - strand, within MPMX26_02791at 2876.044 kb on - strand, within MPMX26_02791at 2876.046 kb on - strand, within MPMX26_02791at 2876.083 kb on + strand, within MPMX26_02791at 2876.091 kb on - strand, within MPMX26_02791at 2876.091 kb on - strand, within MPMX26_02791at 2876.091 kb on - strand, within MPMX26_02791at 2876.156 kb on - strand, within MPMX26_02791at 2876.166 kb on - strand, within MPMX26_02791at 2876.173 kb on + strand, within MPMX26_02791at 2876.187 kb on - strand, within MPMX26_02791at 2876.187 kb on - strand, within MPMX26_02791at 2876.197 kb on - strand, within MPMX26_02791at 2876.272 kb on - strand, within MPMX26_02791at 2876.277 kb on - strand, within MPMX26_02791at 2876.279 kb on - strand, within MPMX26_02791at 2876.289 kb on - strand, within MPMX26_02791at 2876.289 kb on - strand, within MPMX26_02791at 2876.312 kb on - strand, within MPMX26_02791at 2876.312 kb on - strand, within MPMX26_02791at 2876.320 kb on - strand, within MPMX26_02791at 2876.320 kb on - strand, within MPMX26_02791at 2876.344 kb on - strandat 2876.345 kb on - strandat 2876.362 kb on - strandat 2876.362 kb on - strandat 2876.405 kb on - strandat 2876.426 kb on - strandat 2876.426 kb on - strandat 2876.471 kb on - strand, within MPMX26_02792at 2876.471 kb on - strand, within MPMX26_02792at 2876.473 kb on - strand, within MPMX26_02792at 2876.473 kb on - strand, within MPMX26_02792at 2876.516 kb on - strand, within MPMX26_02792at 2876.561 kb on - strand, within MPMX26_02792at 2876.563 kb on - strand, within MPMX26_02792at 2876.563 kb on - strand, within MPMX26_02792at 2876.600 kb on - strand, within MPMX26_02792at 2876.600 kb on - strand, within MPMX26_02792at 2876.627 kb on - strand, within MPMX26_02792at 2876.630 kb on - strand, within MPMX26_02792at 2876.772 kb on - strandat 2876.789 kb on - strandat 2876.799 kb on - strandat 2876.799 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,873,798 - +0.7
2,873,802 - +0.8
2,873,806 - +0.7
2,873,862 - +1.0
2,873,876 - +1.4
2,873,876 - +1.7
2,873,900 - +1.0
2,873,926 - +0.8
2,873,928 - +1.1
2,873,928 - +1.0
2,873,971 - +1.3
2,873,973 - -0.1
2,874,007 - -0.2
2,874,012 - +0.4
2,874,012 - +0.4
2,874,012 - +0.5
2,874,012 - +0.5
2,874,020 - +0.4
2,874,027 - +0.5
2,874,027 - +0.7
2,874,027 - +0.7
2,874,072 - MPMX26_02789 0.11 +0.8
2,874,072 - MPMX26_02789 0.11 +0.7
2,874,074 - MPMX26_02789 0.11 +0.7
2,874,094 - MPMX26_02789 0.14 +1.2
2,874,094 - MPMX26_02789 0.14 +0.5
2,874,094 - MPMX26_02789 0.14 +1.5
2,874,100 - MPMX26_02789 0.15 +0.3
2,874,219 - MPMX26_02789 0.30 +1.1
2,874,253 - MPMX26_02789 0.34 +0.2
2,874,253 - MPMX26_02789 0.34 +0.5
2,874,261 - MPMX26_02789 0.35 +0.5
2,874,343 - MPMX26_02789 0.46 +0.1
2,874,417 - MPMX26_02789 0.55 +0.8
2,874,439 - MPMX26_02789 0.58 +0.5
2,874,495 - MPMX26_02789 0.65 +1.2
2,874,495 - MPMX26_02789 0.65 +1.2
2,874,515 + MPMX26_02789 0.68 +1.1
2,874,523 - MPMX26_02789 0.69 +0.3
2,874,523 - MPMX26_02789 0.69 +0.9
2,874,523 - MPMX26_02789 0.69 -0.2
2,874,523 - MPMX26_02789 0.69 +0.9
2,874,523 - MPMX26_02789 0.69 +1.1
2,874,523 - MPMX26_02789 0.69 +0.2
2,874,523 - MPMX26_02789 0.69 +0.2
2,874,523 - MPMX26_02789 0.69 +0.2
2,874,523 - MPMX26_02789 0.69 +1.0
2,874,583 - MPMX26_02789 0.77 +1.3
2,874,636 - MPMX26_02789 0.83 +0.5
2,874,636 - MPMX26_02789 0.83 +1.2
2,874,636 - MPMX26_02789 0.83 +0.9
2,874,636 - MPMX26_02789 0.83 +0.4
2,874,636 - MPMX26_02789 0.83 +0.8
2,874,636 - MPMX26_02789 0.83 +0.4
2,874,636 - MPMX26_02789 0.83 +0.5
2,874,678 - MPMX26_02789 0.89 +0.7
2,874,726 - -0.0
2,874,751 - +0.3
2,874,771 - +1.6
2,874,771 - +0.3
2,874,792 - +0.1
2,874,792 - -0.0
2,874,792 - -0.5
2,874,808 - +0.1
2,874,810 - +0.1
2,874,810 - +0.3
2,874,810 - +0.7
2,874,810 - +0.1
2,874,810 - +0.0
2,874,810 - +0.9
2,874,810 - +0.4
2,874,810 - +1.0
2,874,810 - -1.4
2,874,810 - +0.1
2,874,810 - +0.4
2,874,810 - +0.1
2,874,810 - +0.6
2,874,810 - -0.3
2,874,810 - +0.4
2,874,839 - +0.8
2,874,851 - +0.2
2,874,950 - MPMX26_02790 0.18 +0.5
2,874,981 - MPMX26_02790 0.21 +0.4
2,874,981 - MPMX26_02790 0.21 -0.1
2,874,982 - MPMX26_02790 0.21 -0.2
2,874,989 - MPMX26_02790 0.21 +0.6
2,875,003 - MPMX26_02790 0.23 +0.4
2,875,003 - MPMX26_02790 0.23 +0.3
2,875,003 - MPMX26_02790 0.23 +1.0
2,875,004 - MPMX26_02790 0.23 +0.4
2,875,009 - MPMX26_02790 0.23 +0.6
2,875,102 - MPMX26_02790 0.32 +0.1
2,875,112 - MPMX26_02790 0.33 +2.1
2,875,126 - MPMX26_02790 0.34 +0.7
2,875,136 - MPMX26_02790 0.35 +0.4
2,875,143 - MPMX26_02790 0.36 +2.5
2,875,152 - MPMX26_02790 0.37 +1.3
2,875,181 - MPMX26_02790 0.40 +0.9
2,875,329 - MPMX26_02790 0.54 -0.3
2,875,356 - MPMX26_02790 0.56 +0.4
2,875,373 - MPMX26_02790 0.58 +0.5
2,875,405 - MPMX26_02790 0.61 +0.1
2,875,405 - MPMX26_02790 0.61 +1.4
2,875,417 - MPMX26_02790 0.62 +0.7
2,875,417 - MPMX26_02790 0.62 +0.2
2,875,428 - MPMX26_02790 0.63 +0.1
2,875,428 - MPMX26_02790 0.63 +0.2
2,875,428 - MPMX26_02790 0.63 +0.1
2,875,428 - MPMX26_02790 0.63 +0.1
2,875,433 - MPMX26_02790 0.64 +0.7
2,875,433 - MPMX26_02790 0.64 -0.1
2,875,438 - MPMX26_02790 0.64 +0.4
2,875,438 - MPMX26_02790 0.64 +1.3
2,875,438 - MPMX26_02790 0.64 +0.4
2,875,438 - MPMX26_02790 0.64 -1.1
2,875,438 - MPMX26_02790 0.64 +0.5
2,875,438 - MPMX26_02790 0.64 +0.1
2,875,460 - MPMX26_02790 0.66 -0.1
2,875,481 - MPMX26_02790 0.68 +0.8
2,875,481 - MPMX26_02790 0.68 +0.3
2,875,481 - MPMX26_02790 0.68 +0.1
2,875,488 - MPMX26_02790 0.69 +0.9
2,875,488 - MPMX26_02790 0.69 +0.4
2,875,488 - MPMX26_02790 0.69 -0.1
2,875,488 - MPMX26_02790 0.69 -0.7
2,875,488 - MPMX26_02790 0.69 +0.6
2,875,488 - MPMX26_02790 0.69 +0.7
2,875,488 - MPMX26_02790 0.69 +0.4
2,875,488 - MPMX26_02790 0.69 +0.0
2,875,488 - MPMX26_02790 0.69 +0.0
2,875,506 - MPMX26_02790 0.71 +0.6
2,875,538 - MPMX26_02790 0.74 -0.0
2,875,550 - MPMX26_02790 0.75 +0.3
2,875,559 - MPMX26_02790 0.76 +0.2
2,875,559 - MPMX26_02790 0.76 +1.6
2,875,559 - MPMX26_02790 0.76 -0.1
2,875,559 - MPMX26_02790 0.76 +0.3
2,875,601 - MPMX26_02790 0.80 -0.0
2,875,789 - +1.2
2,875,839 - +0.5
2,875,839 - +0.7
2,875,890 - MPMX26_02791 0.13 +1.3
2,875,890 - MPMX26_02791 0.13 +0.2
2,875,895 - MPMX26_02791 0.14 +0.7
2,876,041 - MPMX26_02791 0.39 +1.0
2,876,041 - MPMX26_02791 0.39 -0.3
2,876,041 - MPMX26_02791 0.39 +0.7
2,876,041 - MPMX26_02791 0.39 -0.0
2,876,041 - MPMX26_02791 0.39 +1.0
2,876,041 - MPMX26_02791 0.39 +0.6
2,876,044 - MPMX26_02791 0.40 -1.3
2,876,046 - MPMX26_02791 0.40 +0.9
2,876,083 + MPMX26_02791 0.47 +1.4
2,876,091 - MPMX26_02791 0.48 +0.6
2,876,091 - MPMX26_02791 0.48 +0.8
2,876,091 - MPMX26_02791 0.48 +0.2
2,876,156 - MPMX26_02791 0.60 +0.2
2,876,166 - MPMX26_02791 0.61 +0.2
2,876,173 + MPMX26_02791 0.62 +0.5
2,876,187 - MPMX26_02791 0.65 +0.6
2,876,187 - MPMX26_02791 0.65 +0.9
2,876,197 - MPMX26_02791 0.67 +1.1
2,876,272 - MPMX26_02791 0.80 +0.0
2,876,277 - MPMX26_02791 0.81 +0.2
2,876,279 - MPMX26_02791 0.81 -0.0
2,876,289 - MPMX26_02791 0.83 +0.9
2,876,289 - MPMX26_02791 0.83 +0.7
2,876,312 - MPMX26_02791 0.87 +0.1
2,876,312 - MPMX26_02791 0.87 +1.3
2,876,320 - MPMX26_02791 0.88 +1.6
2,876,320 - MPMX26_02791 0.88 +1.0
2,876,344 - +0.1
2,876,345 - -1.0
2,876,362 - -0.2
2,876,362 - -0.9
2,876,405 - +0.7
2,876,426 - +0.3
2,876,426 - +0.3
2,876,471 - MPMX26_02792 0.20 +0.4
2,876,471 - MPMX26_02792 0.20 +1.3
2,876,473 - MPMX26_02792 0.21 -0.1
2,876,473 - MPMX26_02792 0.21 +0.4
2,876,516 - MPMX26_02792 0.31 +0.6
2,876,561 - MPMX26_02792 0.41 +1.2
2,876,563 - MPMX26_02792 0.41 +0.5
2,876,563 - MPMX26_02792 0.41 -0.3
2,876,600 - MPMX26_02792 0.50 +1.1
2,876,600 - MPMX26_02792 0.50 +0.5
2,876,627 - MPMX26_02792 0.56 +0.6
2,876,630 - MPMX26_02792 0.57 -0.4
2,876,772 - +0.2
2,876,789 - +0.7
2,876,799 - -0.1
2,876,799 - +0.1

Or see this region's nucleotide sequence