Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02661 and MPMX26_02662 are separated by 74 nucleotides MPMX26_02662 and MPMX26_02663 are separated by 37 nucleotides MPMX26_02663 and MPMX26_02664 are separated by 163 nucleotides
MPMX26_02661: MPMX26_02661 - hypothetical protein, at 2,757,882 to 2,758,484
_02661
MPMX26_02662: MPMX26_02662 - hypothetical protein, at 2,758,559 to 2,759,086
_02662
MPMX26_02663: MPMX26_02663 - hypothetical protein, at 2,759,124 to 2,759,387
_02663
MPMX26_02664: MPMX26_02664 - Malate dehydrogenase, at 2,759,551 to 2,760,537
_02664
Position (kb)
2759
2760 Strain fitness (log2 ratio)
-1
0
1 at 2758.145 kb on + strand, within MPMX26_02661 at 2758.167 kb on + strand, within MPMX26_02661 at 2758.223 kb on + strand, within MPMX26_02661 at 2758.223 kb on + strand, within MPMX26_02661 at 2758.223 kb on + strand, within MPMX26_02661 at 2758.223 kb on + strand, within MPMX26_02661 at 2758.223 kb on + strand, within MPMX26_02661 at 2758.281 kb on + strand, within MPMX26_02661 at 2758.416 kb on + strand, within MPMX26_02661 at 2758.418 kb on + strand, within MPMX26_02661 at 2758.418 kb on + strand, within MPMX26_02661 at 2758.442 kb on + strand at 2758.442 kb on + strand at 2758.442 kb on + strand at 2758.442 kb on + strand at 2758.442 kb on + strand at 2758.442 kb on + strand at 2758.455 kb on + strand at 2758.457 kb on + strand at 2758.460 kb on + strand at 2758.465 kb on + strand at 2758.467 kb on + strand at 2758.473 kb on + strand at 2758.480 kb on + strand at 2758.485 kb on + strand at 2758.486 kb on + strand at 2758.554 kb on + strand at 2758.607 kb on + strand at 2758.629 kb on + strand, within MPMX26_02662 at 2758.629 kb on + strand, within MPMX26_02662 at 2758.629 kb on + strand, within MPMX26_02662 at 2758.647 kb on + strand, within MPMX26_02662 at 2758.657 kb on + strand, within MPMX26_02662 at 2758.662 kb on + strand, within MPMX26_02662 at 2758.662 kb on + strand, within MPMX26_02662 at 2758.662 kb on + strand, within MPMX26_02662 at 2758.773 kb on + strand, within MPMX26_02662 at 2758.773 kb on + strand, within MPMX26_02662 at 2758.773 kb on + strand, within MPMX26_02662 at 2758.774 kb on + strand, within MPMX26_02662 at 2758.779 kb on + strand, within MPMX26_02662 at 2758.779 kb on + strand, within MPMX26_02662 at 2758.779 kb on + strand, within MPMX26_02662 at 2758.779 kb on + strand, within MPMX26_02662 at 2758.779 kb on + strand, within MPMX26_02662 at 2758.779 kb on + strand, within MPMX26_02662 at 2758.781 kb on + strand, within MPMX26_02662 at 2758.801 kb on + strand, within MPMX26_02662 at 2758.859 kb on + strand, within MPMX26_02662 at 2758.923 kb on + strand, within MPMX26_02662 at 2758.923 kb on + strand, within MPMX26_02662 at 2758.923 kb on + strand, within MPMX26_02662 at 2758.955 kb on + strand, within MPMX26_02662 at 2758.983 kb on + strand, within MPMX26_02662 at 2759.047 kb on + strand at 2759.099 kb on + strand at 2759.099 kb on + strand at 2759.160 kb on - strand, within MPMX26_02663 at 2759.175 kb on - strand, within MPMX26_02663 at 2759.238 kb on - strand, within MPMX26_02663 at 2759.274 kb on - strand, within MPMX26_02663 at 2759.322 kb on - strand, within MPMX26_02663 at 2759.333 kb on - strand, within MPMX26_02663 at 2759.375 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,758,145 + MPMX26_02661 0.44 +0.5 2,758,167 + MPMX26_02661 0.47 +0.6 2,758,223 + MPMX26_02661 0.57 -0.3 2,758,223 + MPMX26_02661 0.57 -1.3 2,758,223 + MPMX26_02661 0.57 +0.7 2,758,223 + MPMX26_02661 0.57 -0.3 2,758,223 + MPMX26_02661 0.57 +0.5 2,758,281 + MPMX26_02661 0.66 -0.2 2,758,416 + MPMX26_02661 0.89 -0.3 2,758,418 + MPMX26_02661 0.89 +0.0 2,758,418 + MPMX26_02661 0.89 -0.2 2,758,442 + -0.6 2,758,442 + -0.6 2,758,442 + -0.3 2,758,442 + -0.6 2,758,442 + -0.7 2,758,442 + -0.3 2,758,455 + -0.3 2,758,457 + +0.5 2,758,460 + +0.3 2,758,465 + -1.1 2,758,467 + +1.5 2,758,473 + -0.9 2,758,480 + +1.7 2,758,485 + -1.0 2,758,486 + -0.2 2,758,554 + -0.1 2,758,607 + +1.0 2,758,629 + MPMX26_02662 0.13 +0.7 2,758,629 + MPMX26_02662 0.13 +0.6 2,758,629 + MPMX26_02662 0.13 +0.1 2,758,647 + MPMX26_02662 0.17 -0.3 2,758,657 + MPMX26_02662 0.19 +0.2 2,758,662 + MPMX26_02662 0.20 +0.8 2,758,662 + MPMX26_02662 0.20 -0.5 2,758,662 + MPMX26_02662 0.20 +0.4 2,758,773 + MPMX26_02662 0.41 +1.1 2,758,773 + MPMX26_02662 0.41 +0.3 2,758,773 + MPMX26_02662 0.41 +1.0 2,758,774 + MPMX26_02662 0.41 -1.1 2,758,779 + MPMX26_02662 0.42 +0.5 2,758,779 + MPMX26_02662 0.42 +0.5 2,758,779 + MPMX26_02662 0.42 -0.3 2,758,779 + MPMX26_02662 0.42 +0.3 2,758,779 + MPMX26_02662 0.42 +0.4 2,758,779 + MPMX26_02662 0.42 -0.2 2,758,781 + MPMX26_02662 0.42 +0.4 2,758,801 + MPMX26_02662 0.46 +0.1 2,758,859 + MPMX26_02662 0.57 +0.5 2,758,923 + MPMX26_02662 0.69 -0.1 2,758,923 + MPMX26_02662 0.69 -0.1 2,758,923 + MPMX26_02662 0.69 +0.1 2,758,955 + MPMX26_02662 0.75 -0.2 2,758,983 + MPMX26_02662 0.80 -0.2 2,759,047 + -0.3 2,759,099 + +0.2 2,759,099 + -0.5 2,759,160 - MPMX26_02663 0.14 +0.0 2,759,175 - MPMX26_02663 0.19 -0.0 2,759,238 - MPMX26_02663 0.43 +0.1 2,759,274 - MPMX26_02663 0.57 +0.9 2,759,322 - MPMX26_02663 0.75 +0.5 2,759,333 - MPMX26_02663 0.79 +1.7 2,759,375 - +0.7
Or see this region's nucleotide sequence