Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02288 and MPMX26_02289 overlap by 4 nucleotides MPMX26_02289 and MPMX26_02290 are separated by 327 nucleotides MPMX26_02290 and MPMX26_02291 are separated by 264 nucleotides
MPMX26_02288: MPMX26_02288 - hypothetical protein, at 2,358,927 to 2,359,487
_02288
MPMX26_02289: MPMX26_02289 - hypothetical protein, at 2,359,484 to 2,359,768
_02289
MPMX26_02290: MPMX26_02290 - Leucine-responsive regulatory protein, at 2,360,096 to 2,360,566
_02290
MPMX26_02291: MPMX26_02291 - hypothetical protein, at 2,360,831 to 2,361,346
_02291
Position (kb)
2360
2361 Strain fitness (log2 ratio)
-1
0
1 at 2359.415 kb on + strand, within MPMX26_02288 at 2359.415 kb on + strand, within MPMX26_02288 at 2359.415 kb on + strand, within MPMX26_02288 at 2359.415 kb on + strand, within MPMX26_02288 at 2359.451 kb on + strand at 2359.451 kb on + strand at 2359.767 kb on + strand at 2359.772 kb on + strand at 2359.837 kb on + strand at 2359.846 kb on + strand at 2359.858 kb on + strand at 2359.895 kb on + strand at 2359.895 kb on + strand at 2359.897 kb on + strand at 2359.899 kb on + strand at 2359.902 kb on + strand at 2359.902 kb on + strand at 2359.922 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.950 kb on + strand at 2359.955 kb on + strand at 2359.955 kb on + strand at 2359.968 kb on - strand at 2359.982 kb on + strand at 2359.998 kb on + strand at 2360.006 kb on + strand at 2360.013 kb on + strand at 2360.019 kb on + strand at 2360.040 kb on + strand at 2360.279 kb on - strand, within MPMX26_02290 at 2360.416 kb on - strand, within MPMX26_02290 at 2361.493 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,359,415 + MPMX26_02288 0.87 +0.4 2,359,415 + MPMX26_02288 0.87 +0.5 2,359,415 + MPMX26_02288 0.87 +0.0 2,359,415 + MPMX26_02288 0.87 -0.1 2,359,451 + -0.9 2,359,451 + +0.6 2,359,767 + -1.3 2,359,772 + +0.2 2,359,837 + -0.3 2,359,846 + +0.1 2,359,858 + -0.1 2,359,895 + -0.3 2,359,895 + -0.1 2,359,897 + -0.3 2,359,899 + +0.1 2,359,902 + -0.7 2,359,902 + -0.3 2,359,922 + -0.4 2,359,950 + -0.4 2,359,950 + +0.1 2,359,950 + -0.1 2,359,950 + +0.4 2,359,950 + -0.6 2,359,950 + -1.7 2,359,950 + -0.0 2,359,950 + -0.2 2,359,950 + -0.2 2,359,950 + -0.1 2,359,950 + -0.3 2,359,955 + -0.6 2,359,955 + -0.6 2,359,968 - -1.4 2,359,982 + -0.1 2,359,998 + -0.8 2,360,006 + -0.1 2,360,013 + -0.0 2,360,019 + +0.0 2,360,040 + +0.1 2,360,279 - MPMX26_02290 0.39 -0.5 2,360,416 - MPMX26_02290 0.68 -1.7 2,361,493 - +0.2
Or see this region's nucleotide sequence