Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02131

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02130 and MPMX26_02131 are separated by 344 nucleotidesMPMX26_02131 and MPMX26_02132 are separated by 294 nucleotides MPMX26_02130: MPMX26_02130 - hypothetical protein, at 2,186,327 to 2,187,853 _02130 MPMX26_02131: MPMX26_02131 - hypothetical protein, at 2,188,198 to 2,188,380 _02131 MPMX26_02132: MPMX26_02132 - hypothetical protein, at 2,188,675 to 2,189,910 _02132 Position (kb) 2188 2189Strain fitness (log2 ratio) -1 0 1at 2187.202 kb on - strand, within MPMX26_02130at 2187.202 kb on - strand, within MPMX26_02130at 2187.202 kb on - strand, within MPMX26_02130at 2188.354 kb on + strand, within MPMX26_02131at 2188.937 kb on - strand, within MPMX26_02132

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,187,202 - MPMX26_02130 0.57 -0.2
2,187,202 - MPMX26_02130 0.57 -0.3
2,187,202 - MPMX26_02130 0.57 -1.2
2,188,354 + MPMX26_02131 0.85 -1.2
2,188,937 - MPMX26_02132 0.21 -1.2

Or see this region's nucleotide sequence