Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02117 and MPMX26_02118 are separated by 205 nucleotides MPMX26_02118 and MPMX26_02119 are separated by 66 nucleotides MPMX26_02119 and MPMX26_02120 are separated by 422 nucleotides
MPMX26_02117: MPMX26_02117 - Soluble pyridine nucleotide transhydrogenase, at 2,170,787 to 2,172,202
_02117
MPMX26_02118: MPMX26_02118 - Lipoyl synthase, at 2,172,408 to 2,173,421
_02118
MPMX26_02119: MPMX26_02119 - hypothetical protein, at 2,173,488 to 2,173,652
_02119
MPMX26_02120: MPMX26_02120 - Acyl-coenzyme A dehydrogenase, at 2,174,075 to 2,176,567
_02120
Position (kb)
2172
2173
2174 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2171.420 kb on - strand, within MPMX26_02117 at 2171.420 kb on - strand, within MPMX26_02117 at 2171.428 kb on - strand, within MPMX26_02117 at 2171.428 kb on - strand, within MPMX26_02117 at 2171.428 kb on - strand, within MPMX26_02117 at 2171.428 kb on - strand, within MPMX26_02117 at 2171.428 kb on - strand, within MPMX26_02117 at 2171.428 kb on - strand, within MPMX26_02117 at 2171.428 kb on - strand, within MPMX26_02117 at 2171.428 kb on - strand, within MPMX26_02117 at 2171.475 kb on - strand, within MPMX26_02117 at 2171.485 kb on - strand, within MPMX26_02117 at 2171.510 kb on - strand, within MPMX26_02117 at 2171.543 kb on - strand, within MPMX26_02117 at 2171.555 kb on - strand, within MPMX26_02117 at 2171.555 kb on - strand, within MPMX26_02117 at 2171.555 kb on - strand, within MPMX26_02117 at 2171.565 kb on - strand, within MPMX26_02117 at 2171.567 kb on - strand, within MPMX26_02117 at 2171.567 kb on - strand, within MPMX26_02117 at 2171.567 kb on - strand, within MPMX26_02117 at 2171.567 kb on - strand, within MPMX26_02117 at 2171.567 kb on - strand, within MPMX26_02117 at 2171.567 kb on - strand, within MPMX26_02117 at 2171.567 kb on - strand, within MPMX26_02117 at 2171.567 kb on - strand, within MPMX26_02117 at 2171.611 kb on - strand, within MPMX26_02117 at 2171.829 kb on - strand, within MPMX26_02117 at 2171.888 kb on - strand, within MPMX26_02117 at 2171.918 kb on - strand, within MPMX26_02117 at 2171.923 kb on - strand, within MPMX26_02117 at 2171.923 kb on - strand, within MPMX26_02117 at 2171.994 kb on - strand, within MPMX26_02117 at 2172.016 kb on - strand, within MPMX26_02117 at 2172.023 kb on - strand, within MPMX26_02117 at 2172.028 kb on - strand, within MPMX26_02117 at 2172.038 kb on - strand, within MPMX26_02117 at 2172.045 kb on - strand, within MPMX26_02117 at 2172.047 kb on - strand, within MPMX26_02117 at 2172.059 kb on - strand, within MPMX26_02117 at 2172.059 kb on - strand, within MPMX26_02117 at 2172.059 kb on - strand, within MPMX26_02117 at 2172.059 kb on - strand, within MPMX26_02117 at 2172.059 kb on - strand, within MPMX26_02117 at 2172.059 kb on - strand, within MPMX26_02117 at 2172.059 kb on - strand, within MPMX26_02117 at 2172.059 kb on - strand, within MPMX26_02117 at 2172.104 kb on - strand at 2172.104 kb on - strand at 2172.141 kb on - strand at 2173.315 kb on + strand, within MPMX26_02118 at 2173.315 kb on + strand, within MPMX26_02118 at 2173.324 kb on + strand at 2173.324 kb on + strand at 2173.340 kb on + strand at 2173.340 kb on + strand at 2173.340 kb on + strand at 2173.340 kb on + strand at 2173.340 kb on + strand at 2173.345 kb on + strand at 2173.370 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 2,171,420 - MPMX26_02117 0.45 -2.1 2,171,420 - MPMX26_02117 0.45 -0.2 2,171,428 - MPMX26_02117 0.45 -1.2 2,171,428 - MPMX26_02117 0.45 -0.6 2,171,428 - MPMX26_02117 0.45 -2.2 2,171,428 - MPMX26_02117 0.45 -2.2 2,171,428 - MPMX26_02117 0.45 -2.4 2,171,428 - MPMX26_02117 0.45 -1.4 2,171,428 - MPMX26_02117 0.45 -1.4 2,171,428 - MPMX26_02117 0.45 -0.4 2,171,475 - MPMX26_02117 0.49 -2.7 2,171,485 - MPMX26_02117 0.49 -1.4 2,171,510 - MPMX26_02117 0.51 -0.1 2,171,543 - MPMX26_02117 0.53 -0.8 2,171,555 - MPMX26_02117 0.54 -3.4 2,171,555 - MPMX26_02117 0.54 +0.8 2,171,555 - MPMX26_02117 0.54 -0.6 2,171,565 - MPMX26_02117 0.55 -0.2 2,171,567 - MPMX26_02117 0.55 -0.2 2,171,567 - MPMX26_02117 0.55 -0.8 2,171,567 - MPMX26_02117 0.55 -2.6 2,171,567 - MPMX26_02117 0.55 -0.9 2,171,567 - MPMX26_02117 0.55 -0.6 2,171,567 - MPMX26_02117 0.55 -1.6 2,171,567 - MPMX26_02117 0.55 -1.4 2,171,567 - MPMX26_02117 0.55 -0.7 2,171,611 - MPMX26_02117 0.58 +0.8 2,171,829 - MPMX26_02117 0.74 +1.2 2,171,888 - MPMX26_02117 0.78 -1.9 2,171,918 - MPMX26_02117 0.80 -1.9 2,171,923 - MPMX26_02117 0.80 -1.2 2,171,923 - MPMX26_02117 0.80 +0.2 2,171,994 - MPMX26_02117 0.85 -0.9 2,172,016 - MPMX26_02117 0.87 -2.6 2,172,023 - MPMX26_02117 0.87 -1.6 2,172,028 - MPMX26_02117 0.88 -1.2 2,172,038 - MPMX26_02117 0.88 -2.2 2,172,045 - MPMX26_02117 0.89 -0.8 2,172,047 - MPMX26_02117 0.89 +0.2 2,172,059 - MPMX26_02117 0.90 -0.6 2,172,059 - MPMX26_02117 0.90 -1.4 2,172,059 - MPMX26_02117 0.90 -1.7 2,172,059 - MPMX26_02117 0.90 -2.6 2,172,059 - MPMX26_02117 0.90 -0.5 2,172,059 - MPMX26_02117 0.90 -1.9 2,172,059 - MPMX26_02117 0.90 -1.7 2,172,059 - MPMX26_02117 0.90 -2.7 2,172,104 - -0.6 2,172,104 - +0.2 2,172,141 - +1.2 2,173,315 + MPMX26_02118 0.89 -1.0 2,173,315 + MPMX26_02118 0.89 -0.8 2,173,324 + -1.9 2,173,324 + -1.9 2,173,340 + -2.0 2,173,340 + -1.4 2,173,340 + -1.9 2,173,340 + -1.9 2,173,340 + +0.5 2,173,345 + -0.2 2,173,370 + -1.6
Or see this region's nucleotide sequence