Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01804

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01802 and MPMX26_01803 are separated by 104 nucleotidesMPMX26_01803 and MPMX26_01804 overlap by 4 nucleotidesMPMX26_01804 and MPMX26_01805 are separated by 265 nucleotidesMPMX26_01805 and MPMX26_01806 are separated by 1 nucleotidesMPMX26_01806 and MPMX26_01807 overlap by 4 nucleotides MPMX26_01802: MPMX26_01802 - hypothetical protein, at 1,862,041 to 1,862,550 _01802 MPMX26_01803: MPMX26_01803 - hypothetical protein, at 1,862,655 to 1,863,026 _01803 MPMX26_01804: MPMX26_01804 - hypothetical protein, at 1,863,023 to 1,863,493 _01804 MPMX26_01805: MPMX26_01805 - hypothetical protein, at 1,863,759 to 1,864,088 _01805 MPMX26_01806: MPMX26_01806 - hypothetical protein, at 1,864,090 to 1,864,398 _01806 MPMX26_01807: MPMX26_01807 - hypothetical protein, at 1,864,395 to 1,864,574 _01807 Position (kb) 1863 1864Strain fitness (log2 ratio) -1 0 1at 1863.226 kb on + strand, within MPMX26_01804at 1863.593 kb on - strandat 1863.593 kb on - strandat 1863.595 kb on - strandat 1863.595 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,863,226 + MPMX26_01804 0.43 -0.6
1,863,593 - +0.3
1,863,593 - +0.4
1,863,595 - +1.2
1,863,595 - +0.3

Or see this region's nucleotide sequence