Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01273

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01271 and MPMX26_01272 are separated by 14 nucleotidesMPMX26_01272 and MPMX26_01273 are separated by 1 nucleotidesMPMX26_01273 and MPMX26_01274 are separated by 346 nucleotides MPMX26_01271: MPMX26_01271 - hypothetical protein, at 1,345,308 to 1,345,919 _01271 MPMX26_01272: MPMX26_01272 - hypothetical protein, at 1,345,934 to 1,346,257 _01272 MPMX26_01273: MPMX26_01273 - Ribokinase, at 1,346,259 to 1,347,263 _01273 MPMX26_01274: MPMX26_01274 - hypothetical protein, at 1,347,610 to 1,350,549 _01274 Position (kb) 1346 1347 1348Strain fitness (log2 ratio) -2 -1 0 1at 1345.854 kb on - strand, within MPMX26_01271at 1345.854 kb on - strand, within MPMX26_01271at 1345.854 kb on - strand, within MPMX26_01271at 1345.859 kb on - strandat 1346.006 kb on - strand, within MPMX26_01272at 1346.021 kb on - strand, within MPMX26_01272at 1346.021 kb on - strand, within MPMX26_01272at 1346.021 kb on - strand, within MPMX26_01272at 1346.021 kb on - strand, within MPMX26_01272at 1346.021 kb on - strand, within MPMX26_01272at 1346.026 kb on - strand, within MPMX26_01272at 1346.031 kb on - strand, within MPMX26_01272at 1346.031 kb on - strand, within MPMX26_01272at 1346.031 kb on - strand, within MPMX26_01272at 1346.042 kb on - strand, within MPMX26_01272at 1346.047 kb on - strand, within MPMX26_01272at 1346.221 kb on - strand, within MPMX26_01272at 1346.234 kb on - strandat 1346.306 kb on - strandat 1346.409 kb on - strand, within MPMX26_01273at 1346.409 kb on - strand, within MPMX26_01273at 1346.409 kb on - strand, within MPMX26_01273at 1346.409 kb on - strand, within MPMX26_01273at 1346.409 kb on - strand, within MPMX26_01273at 1346.409 kb on - strand, within MPMX26_01273at 1346.432 kb on - strand, within MPMX26_01273at 1346.432 kb on - strand, within MPMX26_01273at 1346.468 kb on - strand, within MPMX26_01273at 1346.471 kb on - strand, within MPMX26_01273at 1346.474 kb on - strand, within MPMX26_01273at 1346.511 kb on - strand, within MPMX26_01273at 1346.511 kb on - strand, within MPMX26_01273at 1346.511 kb on - strand, within MPMX26_01273at 1346.516 kb on - strand, within MPMX26_01273at 1346.598 kb on - strand, within MPMX26_01273at 1346.598 kb on - strand, within MPMX26_01273at 1346.598 kb on - strand, within MPMX26_01273at 1346.603 kb on - strand, within MPMX26_01273at 1346.603 kb on - strand, within MPMX26_01273at 1346.627 kb on - strand, within MPMX26_01273at 1346.660 kb on - strand, within MPMX26_01273at 1346.666 kb on - strand, within MPMX26_01273at 1346.678 kb on - strand, within MPMX26_01273at 1346.700 kb on - strand, within MPMX26_01273at 1346.700 kb on - strand, within MPMX26_01273at 1346.700 kb on - strand, within MPMX26_01273at 1346.747 kb on - strand, within MPMX26_01273at 1346.780 kb on - strand, within MPMX26_01273at 1346.780 kb on - strand, within MPMX26_01273at 1346.780 kb on - strand, within MPMX26_01273at 1346.792 kb on - strand, within MPMX26_01273at 1346.816 kb on - strand, within MPMX26_01273at 1346.876 kb on - strand, within MPMX26_01273at 1346.876 kb on - strand, within MPMX26_01273at 1346.901 kb on - strand, within MPMX26_01273at 1346.906 kb on - strand, within MPMX26_01273at 1346.906 kb on - strand, within MPMX26_01273at 1346.906 kb on - strand, within MPMX26_01273at 1346.906 kb on - strand, within MPMX26_01273at 1346.906 kb on - strand, within MPMX26_01273at 1346.906 kb on - strand, within MPMX26_01273at 1346.906 kb on - strand, within MPMX26_01273at 1346.927 kb on - strand, within MPMX26_01273at 1346.927 kb on - strand, within MPMX26_01273at 1346.932 kb on - strand, within MPMX26_01273at 1346.957 kb on - strand, within MPMX26_01273at 1346.957 kb on - strand, within MPMX26_01273at 1346.993 kb on - strand, within MPMX26_01273at 1346.997 kb on - strand, within MPMX26_01273at 1347.071 kb on - strand, within MPMX26_01273at 1347.082 kb on - strand, within MPMX26_01273at 1347.083 kb on - strand, within MPMX26_01273at 1347.092 kb on - strand, within MPMX26_01273at 1347.131 kb on - strand, within MPMX26_01273at 1347.131 kb on - strand, within MPMX26_01273at 1347.153 kb on - strand, within MPMX26_01273at 1347.200 kb on - strandat 1347.604 kb on + strandat 1347.604 kb on + strandat 1347.670 kb on + strandat 1347.670 kb on + strandat 1347.670 kb on + strandat 1347.670 kb on + strandat 1347.670 kb on + strandat 1347.670 kb on + strandat 1347.670 kb on + strandat 1347.671 kb on + strandat 1347.688 kb on + strandat 1347.722 kb on + strandat 1347.722 kb on + strandat 1347.723 kb on + strandat 1347.736 kb on + strandat 1347.788 kb on + strandat 1347.798 kb on + strandat 1347.836 kb on + strandat 1347.841 kb on + strandat 1347.841 kb on + strandat 1347.841 kb on + strandat 1347.862 kb on + strandat 1347.941 kb on + strand, within MPMX26_01274at 1347.946 kb on + strand, within MPMX26_01274at 1347.946 kb on + strand, within MPMX26_01274at 1347.946 kb on + strand, within MPMX26_01274at 1347.946 kb on + strand, within MPMX26_01274at 1347.946 kb on + strand, within MPMX26_01274at 1347.987 kb on + strand, within MPMX26_01274at 1347.997 kb on + strand, within MPMX26_01274at 1348.026 kb on + strand, within MPMX26_01274at 1348.026 kb on + strand, within MPMX26_01274at 1348.026 kb on + strand, within MPMX26_01274at 1348.055 kb on + strand, within MPMX26_01274at 1348.068 kb on + strand, within MPMX26_01274at 1348.073 kb on + strand, within MPMX26_01274at 1348.087 kb on + strand, within MPMX26_01274at 1348.087 kb on + strand, within MPMX26_01274at 1348.089 kb on + strand, within MPMX26_01274at 1348.120 kb on + strand, within MPMX26_01274at 1348.146 kb on + strand, within MPMX26_01274

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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1,345,854 - MPMX26_01271 0.89 +1.3
1,345,854 - MPMX26_01271 0.89 +0.8
1,345,854 - MPMX26_01271 0.89 +1.1
1,345,859 - +1.0
1,346,006 - MPMX26_01272 0.22 -0.1
1,346,021 - MPMX26_01272 0.27 +0.3
1,346,021 - MPMX26_01272 0.27 +0.9
1,346,021 - MPMX26_01272 0.27 +0.2
1,346,021 - MPMX26_01272 0.27 +0.0
1,346,021 - MPMX26_01272 0.27 -0.6
1,346,026 - MPMX26_01272 0.28 -0.7
1,346,031 - MPMX26_01272 0.30 -0.3
1,346,031 - MPMX26_01272 0.30 +0.3
1,346,031 - MPMX26_01272 0.30 +0.4
1,346,042 - MPMX26_01272 0.33 -0.3
1,346,047 - MPMX26_01272 0.35 +0.3
1,346,221 - MPMX26_01272 0.89 -0.7
1,346,234 - +0.5
1,346,306 - -1.2
1,346,409 - MPMX26_01273 0.15 -0.0
1,346,409 - MPMX26_01273 0.15 -1.5
1,346,409 - MPMX26_01273 0.15 -0.1
1,346,409 - MPMX26_01273 0.15 -0.6
1,346,409 - MPMX26_01273 0.15 -0.2
1,346,409 - MPMX26_01273 0.15 -0.7
1,346,432 - MPMX26_01273 0.17 -0.4
1,346,432 - MPMX26_01273 0.17 -0.6
1,346,468 - MPMX26_01273 0.21 -0.0
1,346,471 - MPMX26_01273 0.21 -0.1
1,346,474 - MPMX26_01273 0.21 -1.1
1,346,511 - MPMX26_01273 0.25 -2.0
1,346,511 - MPMX26_01273 0.25 -1.5
1,346,511 - MPMX26_01273 0.25 -0.8
1,346,516 - MPMX26_01273 0.26 -0.3
1,346,598 - MPMX26_01273 0.34 +0.1
1,346,598 - MPMX26_01273 0.34 +0.0
1,346,598 - MPMX26_01273 0.34 +0.2
1,346,603 - MPMX26_01273 0.34 -0.6
1,346,603 - MPMX26_01273 0.34 -0.2
1,346,627 - MPMX26_01273 0.37 -0.4
1,346,660 - MPMX26_01273 0.40 +1.7
1,346,666 - MPMX26_01273 0.40 +0.3
1,346,678 - MPMX26_01273 0.42 -1.1
1,346,700 - MPMX26_01273 0.44 -1.0
1,346,700 - MPMX26_01273 0.44 -0.0
1,346,700 - MPMX26_01273 0.44 +0.9
1,346,747 - MPMX26_01273 0.49 -0.8
1,346,780 - MPMX26_01273 0.52 -0.4
1,346,780 - MPMX26_01273 0.52 -0.2
1,346,780 - MPMX26_01273 0.52 -2.4
1,346,792 - MPMX26_01273 0.53 -0.7
1,346,816 - MPMX26_01273 0.55 -0.4
1,346,876 - MPMX26_01273 0.61 +0.2
1,346,876 - MPMX26_01273 0.61 -0.3
1,346,901 - MPMX26_01273 0.64 -0.6
1,346,906 - MPMX26_01273 0.64 -1.2
1,346,906 - MPMX26_01273 0.64 +0.1
1,346,906 - MPMX26_01273 0.64 +1.7
1,346,906 - MPMX26_01273 0.64 +0.3
1,346,906 - MPMX26_01273 0.64 -0.3
1,346,906 - MPMX26_01273 0.64 -0.7
1,346,906 - MPMX26_01273 0.64 -1.4
1,346,927 - MPMX26_01273 0.66 +0.4
1,346,927 - MPMX26_01273 0.66 -0.4
1,346,932 - MPMX26_01273 0.67 -0.0
1,346,957 - MPMX26_01273 0.69 -0.1
1,346,957 - MPMX26_01273 0.69 -0.2
1,346,993 - MPMX26_01273 0.73 -1.2
1,346,997 - MPMX26_01273 0.73 -2.0
1,347,071 - MPMX26_01273 0.81 +0.0
1,347,082 - MPMX26_01273 0.82 -0.3
1,347,083 - MPMX26_01273 0.82 +0.5
1,347,092 - MPMX26_01273 0.83 -0.8
1,347,131 - MPMX26_01273 0.87 -1.8
1,347,131 - MPMX26_01273 0.87 -1.3
1,347,153 - MPMX26_01273 0.89 -0.2
1,347,200 - +0.2
1,347,604 + +0.2
1,347,604 + -0.0
1,347,670 + -0.2
1,347,670 + +0.2
1,347,670 + -0.4
1,347,670 + -1.2
1,347,670 + +0.6
1,347,670 + +0.0
1,347,670 + +0.9
1,347,671 + +1.0
1,347,688 + +0.5
1,347,722 + +0.2
1,347,722 + -0.2
1,347,723 + -0.1
1,347,736 + -0.1
1,347,788 + -0.4
1,347,798 + +0.9
1,347,836 + +1.3
1,347,841 + -0.2
1,347,841 + +0.3
1,347,841 + -0.0
1,347,862 + +0.0
1,347,941 + MPMX26_01274 0.11 +0.1
1,347,946 + MPMX26_01274 0.11 +0.3
1,347,946 + MPMX26_01274 0.11 -1.1
1,347,946 + MPMX26_01274 0.11 +1.3
1,347,946 + MPMX26_01274 0.11 +0.7
1,347,946 + MPMX26_01274 0.11 +0.7
1,347,987 + MPMX26_01274 0.13 +0.3
1,347,997 + MPMX26_01274 0.13 +0.6
1,348,026 + MPMX26_01274 0.14 +0.5
1,348,026 + MPMX26_01274 0.14 +0.1
1,348,026 + MPMX26_01274 0.14 +0.0
1,348,055 + MPMX26_01274 0.15 -0.4
1,348,068 + MPMX26_01274 0.16 +0.2
1,348,073 + MPMX26_01274 0.16 -0.4
1,348,087 + MPMX26_01274 0.16 -0.6
1,348,087 + MPMX26_01274 0.16 -0.1
1,348,089 + MPMX26_01274 0.16 -0.3
1,348,120 + MPMX26_01274 0.17 -0.4
1,348,146 + MPMX26_01274 0.18 +0.2

Or see this region's nucleotide sequence