Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01113 and MPMX26_01114 are separated by 58 nucleotides MPMX26_01114 and MPMX26_01115 are separated by 208 nucleotides MPMX26_01115 and MPMX26_01116 are separated by 38 nucleotides
MPMX26_01113: MPMX26_01113 - ATP-dependent RNA helicase RhlB, at 1,182,974 to 1,184,125
_01113
MPMX26_01114: MPMX26_01114 - hypothetical protein, at 1,184,184 to 1,184,567
_01114
MPMX26_01115: MPMX26_01115 - Putative NAD(P)H nitroreductase YdjA, at 1,184,776 to 1,185,351
_01115
MPMX26_01116: MPMX26_01116 - Glycerol-3-phosphate dehydrogenase [NAD(P)+], at 1,185,390 to 1,186,463
_01116
Position (kb) 1184
1185
1186 Strain fitness (log2 ratio) -2
-1
0
1 at 1183.834 kb on + strand, within MPMX26_01113 at 1183.876 kb on + strand, within MPMX26_01113 at 1183.876 kb on + strand, within MPMX26_01113 at 1183.876 kb on + strand, within MPMX26_01113 at 1183.914 kb on + strand, within MPMX26_01113 at 1184.000 kb on + strand, within MPMX26_01113 at 1184.000 kb on + strand, within MPMX26_01113 at 1184.000 kb on + strand, within MPMX26_01113 at 1184.000 kb on + strand, within MPMX26_01113 at 1184.010 kb on + strand at 1184.017 kb on + strand at 1184.085 kb on + strand at 1184.899 kb on + strand, within MPMX26_01115 at 1184.905 kb on + strand, within MPMX26_01115 at 1184.905 kb on + strand, within MPMX26_01115 at 1184.905 kb on + strand, within MPMX26_01115 at 1185.139 kb on + strand, within MPMX26_01115
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 1,183,834 + MPMX26_01113 0.75 +0.0 1,183,876 + MPMX26_01113 0.78 +0.0 1,183,876 + MPMX26_01113 0.78 -0.3 1,183,876 + MPMX26_01113 0.78 -0.0 1,183,914 + MPMX26_01113 0.82 -0.9 1,184,000 + MPMX26_01113 0.89 +0.1 1,184,000 + MPMX26_01113 0.89 -0.1 1,184,000 + MPMX26_01113 0.89 -0.1 1,184,000 + MPMX26_01113 0.89 -0.1 1,184,010 + -0.7 1,184,017 + +0.1 1,184,085 + +0.3 1,184,899 + MPMX26_01115 0.21 -0.7 1,184,905 + MPMX26_01115 0.22 -0.3 1,184,905 + MPMX26_01115 0.22 -0.7 1,184,905 + MPMX26_01115 0.22 -1.9 1,185,139 + MPMX26_01115 0.63 -0.6
Or see this region's nucleotide sequence