Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00634 and MPMX26_00635 are separated by 226 nucleotides MPMX26_00635 and MPMX26_00636 are separated by 298 nucleotides MPMX26_00636 and MPMX26_00637 are separated by 42 nucleotides
MPMX26_00634: MPMX26_00634 - 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase, at 675,896 to 677,581
_00634
MPMX26_00635: MPMX26_00635 - Peptide antibiotic transporter SbmA, at 677,808 to 679,007
_00635
MPMX26_00636: MPMX26_00636 - hypothetical protein, at 679,306 to 679,800
_00636
MPMX26_00637: MPMX26_00637 - Aromatic amino acid exporter YddG, at 679,843 to 680,778
_00637
Position (kb) 677
678
679
680 Strain fitness (log2 ratio) -1
0
1 at 676.965 kb on - strand, within MPMX26_00634 at 677.752 kb on + strand at 677.947 kb on + strand, within MPMX26_00635 at 677.952 kb on + strand, within MPMX26_00635 at 677.965 kb on + strand, within MPMX26_00635 at 678.024 kb on + strand, within MPMX26_00635 at 678.395 kb on + strand, within MPMX26_00635 at 678.548 kb on + strand, within MPMX26_00635 at 678.585 kb on + strand, within MPMX26_00635 at 678.812 kb on + strand, within MPMX26_00635 at 678.903 kb on + strand at 679.596 kb on + strand, within MPMX26_00636
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 676,965 - MPMX26_00634 0.63 -0.1 677,752 + +1.1 677,947 + MPMX26_00635 0.12 -1.4 677,952 + MPMX26_00635 0.12 +0.7 677,965 + MPMX26_00635 0.13 -0.9 678,024 + MPMX26_00635 0.18 -1.6 678,395 + MPMX26_00635 0.49 +0.6 678,548 + MPMX26_00635 0.62 -1.7 678,585 + MPMX26_00635 0.65 +0.7 678,812 + MPMX26_00635 0.84 +1.1 678,903 + +0.6 679,596 + MPMX26_00636 0.59 -1.3
Or see this region's nucleotide sequence