Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00557 and MPMX26_00558 are separated by 40 nucleotides MPMX26_00558 and MPMX26_00559 are separated by 125 nucleotides MPMX26_00559 and MPMX26_00560 are separated by 237 nucleotides MPMX26_00560 and MPMX26_00561 are separated by 11 nucleotides
MPMX26_00557: MPMX26_00557 - Inner membrane protein YqaA, at 588,573 to 588,995
_00557
MPMX26_00558: MPMX26_00558 - hypothetical protein, at 589,036 to 589,776
_00558
MPMX26_00559: MPMX26_00559 - Enterobactin exporter EntS, at 589,902 to 591,164
_00559
MPMX26_00560: MPMX26_00560 - 50S ribosomal protein L35, at 591,402 to 591,596
_00560
MPMX26_00561: MPMX26_00561 - 50S ribosomal protein L20, at 591,608 to 591,967
_00561
Position (kb) 589
590
591
592 Strain fitness (log2 ratio) -1
0
1
2 at 589.118 kb on - strand, within MPMX26_00558 at 589.146 kb on - strand, within MPMX26_00558 at 589.150 kb on - strand, within MPMX26_00558 at 589.160 kb on - strand, within MPMX26_00558 at 589.175 kb on - strand, within MPMX26_00558 at 589.258 kb on - strand, within MPMX26_00558 at 589.258 kb on - strand, within MPMX26_00558 at 589.258 kb on - strand, within MPMX26_00558 at 589.258 kb on - strand, within MPMX26_00558 at 589.295 kb on - strand, within MPMX26_00558 at 589.336 kb on - strand, within MPMX26_00558 at 589.363 kb on + strand, within MPMX26_00558 at 589.366 kb on - strand, within MPMX26_00558 at 589.371 kb on - strand, within MPMX26_00558 at 589.371 kb on - strand, within MPMX26_00558 at 589.453 kb on - strand, within MPMX26_00558 at 589.458 kb on - strand, within MPMX26_00558 at 589.477 kb on - strand, within MPMX26_00558 at 589.477 kb on - strand, within MPMX26_00558 at 589.477 kb on - strand, within MPMX26_00558 at 589.477 kb on - strand, within MPMX26_00558 at 589.477 kb on - strand, within MPMX26_00558 at 589.534 kb on - strand, within MPMX26_00558 at 589.636 kb on - strand, within MPMX26_00558 at 589.677 kb on - strand, within MPMX26_00558 at 589.698 kb on - strand, within MPMX26_00558 at 590.190 kb on - strand, within MPMX26_00559 at 590.196 kb on - strand, within MPMX26_00559 at 590.297 kb on - strand, within MPMX26_00559 at 590.297 kb on - strand, within MPMX26_00559 at 590.708 kb on - strand, within MPMX26_00559 at 590.765 kb on - strand, within MPMX26_00559 at 590.839 kb on - strand, within MPMX26_00559 at 590.997 kb on - strand, within MPMX26_00559 at 591.127 kb on - strand at 591.943 kb on + strand at 591.943 kb on + strand at 591.962 kb on + strand at 592.003 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 589,118 - MPMX26_00558 0.11 +0.5 589,146 - MPMX26_00558 0.15 -0.9 589,150 - MPMX26_00558 0.15 -0.1 589,160 - MPMX26_00558 0.17 +0.7 589,175 - MPMX26_00558 0.19 -0.2 589,258 - MPMX26_00558 0.30 +0.6 589,258 - MPMX26_00558 0.30 -0.1 589,258 - MPMX26_00558 0.30 -1.0 589,258 - MPMX26_00558 0.30 +0.6 589,295 - MPMX26_00558 0.35 +1.0 589,336 - MPMX26_00558 0.40 -0.3 589,363 + MPMX26_00558 0.44 +1.5 589,366 - MPMX26_00558 0.45 -0.5 589,371 - MPMX26_00558 0.45 -0.2 589,371 - MPMX26_00558 0.45 -0.5 589,453 - MPMX26_00558 0.56 -0.5 589,458 - MPMX26_00558 0.57 -0.2 589,477 - MPMX26_00558 0.60 +0.1 589,477 - MPMX26_00558 0.60 -0.4 589,477 - MPMX26_00558 0.60 +0.3 589,477 - MPMX26_00558 0.60 -0.2 589,477 - MPMX26_00558 0.60 +0.0 589,534 - MPMX26_00558 0.67 +0.1 589,636 - MPMX26_00558 0.81 +0.2 589,677 - MPMX26_00558 0.87 +0.0 589,698 - MPMX26_00558 0.89 +0.1 590,190 - MPMX26_00559 0.23 -0.7 590,196 - MPMX26_00559 0.23 +2.7 590,297 - MPMX26_00559 0.31 +1.3 590,297 - MPMX26_00559 0.31 +2.7 590,708 - MPMX26_00559 0.64 -0.6 590,765 - MPMX26_00559 0.68 -0.3 590,839 - MPMX26_00559 0.74 +0.7 590,997 - MPMX26_00559 0.87 +0.7 591,127 - +1.0 591,943 + -0.6 591,943 + -0.6 591,962 + -1.1 592,003 + -0.2
Or see this region's nucleotide sequence