Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00329 and MPMX26_00330 are separated by 2 nucleotides MPMX26_00330 and MPMX26_00331 are separated by 65 nucleotides MPMX26_00331 and MPMX26_00332 are separated by 12 nucleotides
MPMX26_00329: MPMX26_00329 - 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit, at 358,368 to 358,694
_00329
MPMX26_00330: MPMX26_00330 - 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase, at 358,697 to 359,512
_00330
MPMX26_00331: MPMX26_00331 - 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase, at 359,578 to 360,537
_00331
MPMX26_00332: MPMX26_00332 - 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component, at 360,550 to 361,773
_00332
Position (kb) 359
360
361 Strain fitness (log2 ratio) -1
0
1
2 at 358.897 kb on + strand, within MPMX26_00330 at 359.065 kb on + strand, within MPMX26_00330 at 359.065 kb on + strand, within MPMX26_00330 at 359.103 kb on + strand, within MPMX26_00330 at 359.443 kb on + strand at 359.527 kb on + strand at 359.600 kb on - strand at 359.632 kb on + strand at 360.266 kb on - strand, within MPMX26_00331 at 360.418 kb on + strand, within MPMX26_00331 at 360.439 kb on + strand, within MPMX26_00331 at 360.557 kb on - strand at 360.764 kb on + strand, within MPMX26_00332 at 360.814 kb on + strand, within MPMX26_00332 at 360.858 kb on + strand, within MPMX26_00332 at 361.081 kb on + strand, within MPMX26_00332 at 361.105 kb on + strand, within MPMX26_00332 at 361.105 kb on + strand, within MPMX26_00332 at 361.105 kb on + strand, within MPMX26_00332 at 361.138 kb on + strand, within MPMX26_00332 at 361.249 kb on + strand, within MPMX26_00332 at 361.295 kb on + strand, within MPMX26_00332 at 361.346 kb on - strand, within MPMX26_00332 at 361.384 kb on + strand, within MPMX26_00332 at 361.384 kb on + strand, within MPMX26_00332 at 361.407 kb on + strand, within MPMX26_00332 at 361.506 kb on + strand, within MPMX26_00332 at 361.506 kb on + strand, within MPMX26_00332 at 361.511 kb on + strand, within MPMX26_00332 at 361.511 kb on + strand, within MPMX26_00332
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 358,897 + MPMX26_00330 0.25 +0.9 359,065 + MPMX26_00330 0.45 +0.1 359,065 + MPMX26_00330 0.45 -0.3 359,103 + MPMX26_00330 0.50 +0.9 359,443 + +0.7 359,527 + +2.5 359,600 - -1.1 359,632 + +0.7 360,266 - MPMX26_00331 0.72 +0.4 360,418 + MPMX26_00331 0.88 -0.1 360,439 + MPMX26_00331 0.90 -1.5 360,557 - -0.2 360,764 + MPMX26_00332 0.17 +0.2 360,814 + MPMX26_00332 0.22 +1.0 360,858 + MPMX26_00332 0.25 +0.9 361,081 + MPMX26_00332 0.43 +0.2 361,105 + MPMX26_00332 0.45 -1.1 361,105 + MPMX26_00332 0.45 -0.7 361,105 + MPMX26_00332 0.45 -0.7 361,138 + MPMX26_00332 0.48 -0.6 361,249 + MPMX26_00332 0.57 -0.3 361,295 + MPMX26_00332 0.61 +0.2 361,346 - MPMX26_00332 0.65 -0.9 361,384 + MPMX26_00332 0.68 +1.4 361,384 + MPMX26_00332 0.68 -0.2 361,407 + MPMX26_00332 0.70 +1.4 361,506 + MPMX26_00332 0.78 -0.0 361,506 + MPMX26_00332 0.78 -0.6 361,511 + MPMX26_00332 0.79 +1.1 361,511 + MPMX26_00332 0.79 +0.7
Or see this region's nucleotide sequence