Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06265 and MPMX19_06266 are separated by 130 nucleotides MPMX19_06266 and MPMX19_06267 are separated by 433 nucleotides
MPMX19_06265: MPMX19_06265 - hypothetical protein, at 16,571 to 17,194
_06265
MPMX19_06266: MPMX19_06266 - hypothetical protein, at 17,325 to 17,687
_06266
MPMX19_06267: MPMX19_06267 - hypothetical protein, at 18,121 to 18,384
_06267
Position (kb) 16
17
18 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 15.692 kb on + strand at 15.692 kb on + strand at 15.692 kb on + strand at 15.693 kb on - strand at 15.793 kb on + strand at 15.793 kb on + strand at 15.793 kb on + strand at 15.793 kb on + strand at 15.892 kb on + strand at 15.892 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.037 kb on + strand at 16.038 kb on - strand at 16.038 kb on - strand at 16.038 kb on - strand at 16.038 kb on - strand at 16.244 kb on + strand at 16.244 kb on + strand at 16.244 kb on + strand at 16.244 kb on + strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 16.245 kb on - strand at 17.412 kb on + strand, within MPMX19_06266 at 17.413 kb on - strand, within MPMX19_06266 at 17.413 kb on - strand, within MPMX19_06266 at 17.567 kb on + strand, within MPMX19_06266 at 17.921 kb on + strand at 17.922 kb on - strand at 17.922 kb on - strand at 17.995 kb on + strand at 18.003 kb on + strand at 18.003 kb on + strand at 18.003 kb on + strand at 18.003 kb on + strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.004 kb on - strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.041 kb on + strand at 18.042 kb on - strand at 18.042 kb on - strand at 18.042 kb on - strand at 18.042 kb on - strand at 18.042 kb on - strand at 18.058 kb on - strand at 18.123 kb on - strand at 18.132 kb on + strand at 18.132 kb on + strand at 18.132 kb on + strand at 18.133 kb on - strand at 18.133 kb on - strand at 18.133 kb on - strand at 18.133 kb on - strand at 18.133 kb on - strand at 18.139 kb on - strand at 18.139 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 15,692 + +0.7 15,692 + +0.0 15,692 + +0.6 15,693 - -0.2 15,793 + +0.6 15,793 + +0.3 15,793 + -1.8 15,793 + +0.1 15,892 + +0.6 15,892 + -1.2 16,037 + -1.2 16,037 + +1.6 16,037 + +0.2 16,037 + +0.5 16,037 + +0.0 16,037 + -0.4 16,038 - -0.5 16,038 - +0.6 16,038 - +0.6 16,038 - -1.7 16,244 + -0.4 16,244 + +0.6 16,244 + +0.6 16,244 + -1.2 16,245 - -1.7 16,245 - -0.1 16,245 - -1.0 16,245 - +0.6 16,245 - -1.8 16,245 - +0.2 16,245 - -2.9 16,245 - +0.6 17,412 + MPMX19_06266 0.24 +1.0 17,413 - MPMX19_06266 0.24 -0.6 17,413 - MPMX19_06266 0.24 +0.0 17,567 + MPMX19_06266 0.67 +0.6 17,921 + +1.0 17,922 - +0.5 17,922 - +0.9 17,995 + +1.3 18,003 + +0.6 18,003 + -0.7 18,003 + +0.6 18,003 + -0.7 18,004 - -0.4 18,004 - +0.0 18,004 - -1.4 18,004 - +0.3 18,004 - +1.0 18,004 - +0.6 18,041 + -0.7 18,041 + -1.2 18,041 + -2.8 18,041 + +0.6 18,041 + -0.6 18,041 + -0.7 18,042 - +0.0 18,042 - +1.0 18,042 - -1.0 18,042 - +0.0 18,042 - +0.0 18,058 - -0.7 18,123 - +1.2 18,132 + -0.4 18,132 + +0.6 18,132 + +1.6 18,133 - +0.2 18,133 - +0.4 18,133 - -1.5 18,133 - +0.9 18,133 - -1.7 18,139 - +0.4 18,139 - -1.7
Or see this region's nucleotide sequence