Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05876

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
5,425	+		MPMX19_05875	0.28	-2.4
5,425	+		MPMX19_05875	0.28	-0.7
5,425	+		MPMX19_05875	0.28	-0.5
5,425	+		MPMX19_05875	0.28	-0.8
5,425	+		MPMX19_05875	0.28	-0.6
5,425	+		MPMX19_05875	0.28	-1.5
5,425	+		MPMX19_05875	0.28	+0.2
5,425	+		MPMX19_05875	0.28	+0.5
5,426	-		MPMX19_05875	0.28	-0.8
5,426	-		MPMX19_05875	0.28	+1.9
5,426	-		MPMX19_05875	0.28	+2.1
5,426	-		MPMX19_05875	0.28	-0.3
5,456	+		MPMX19_05875	0.31	-0.3
5,456	+		MPMX19_05875	0.31	+2.2
5,456	+		MPMX19_05875	0.31	+0.8
5,456	+		MPMX19_05875	0.31	-1.5
5,456	+		MPMX19_05875	0.31	-0.8
5,456	+		MPMX19_05875	0.31	-1.0
5,457	-		MPMX19_05875	0.31	+0.5
5,457	-		MPMX19_05875	0.31	-0.8
5,457	-		MPMX19_05875	0.31	+0.2
5,578	+		MPMX19_05875	0.42	-0.8
5,578	+		MPMX19_05875	0.42	-1.3
5,579	-		MPMX19_05875	0.42	-0.1
5,686	+		MPMX19_05875	0.52	-0.5
5,687	-		MPMX19_05875	0.52	+1.5
5,687	-		MPMX19_05875	0.52	-0.8
5,947	+		MPMX19_05875	0.76	-1.1
5,947	+		MPMX19_05875	0.76	-0.1
5,947	+		MPMX19_05875	0.76	-1.0
5,947	+		MPMX19_05875	0.76	-0.1
5,947	+		MPMX19_05875	0.76	-2.0
5,947	+		MPMX19_05875	0.76	-0.8
5,947	+		MPMX19_05875	0.76	-1.5
5,947	+		MPMX19_05875	0.76	-1.3
5,947	+		MPMX19_05875	0.76	-0.7
5,947	+		MPMX19_05875	0.76	-0.8
5,947	+		MPMX19_05875	0.76	+0.9
5,947	+		MPMX19_05875	0.76	-0.0
5,948	-		MPMX19_05875	0.76	-1.3
5,948	-		MPMX19_05875	0.76	-0.8
5,948	-		MPMX19_05875	0.76	-0.1
5,948	-		MPMX19_05875	0.76	-1.7
5,948	-		MPMX19_05875	0.76	+0.9
5,948	-		MPMX19_05875	0.76	+0.5
6,028	+		MPMX19_05875	0.83	-1.5
6,028	+		MPMX19_05875	0.83	-0.6
6,028	+		MPMX19_05875	0.83	-0.5
6,028	+		MPMX19_05875	0.83	-0.3
6,028	+		MPMX19_05875	0.83	-0.5
6,028	+		MPMX19_05875	0.83	-0.1
6,028	+		MPMX19_05875	0.83	-1.5
6,028	+		MPMX19_05875	0.83	+0.5
6,028	+		MPMX19_05875	0.83	-0.1
6,028	+		MPMX19_05875	0.83	-0.2
6,028	+		MPMX19_05875	0.83	+1.5
6,028	+		MPMX19_05875	0.83	-1.1
6,028	+		MPMX19_05875	0.83	-0.1
6,028	+		MPMX19_05875	0.83	-2.5
6,028	+		MPMX19_05875	0.83	-1.3
6,029	-		MPMX19_05875	0.83	-0.8
6,029	-		MPMX19_05875	0.83	-0.1
6,029	-		MPMX19_05875	0.83	+1.9
6,029	-		MPMX19_05875	0.83	-0.8
6,029	-		MPMX19_05875	0.83	-0.1
6,029	-		MPMX19_05875	0.83	+0.2
6,029	-		MPMX19_05875	0.83	-1.7
6,029	-		MPMX19_05875	0.83	-0.2
6,029	-		MPMX19_05875	0.83	+0.5
6,029	-		MPMX19_05875	0.83	+0.1
6,029	-		MPMX19_05875	0.83	+0.8
6,034	+		MPMX19_05875	0.83	-0.4
6,034	+		MPMX19_05875	0.83	-2.0
6,034	+		MPMX19_05875	0.83	-0.7
6,034	+		MPMX19_05875	0.83	-0.5
6,034	+		MPMX19_05875	0.83	-1.4
6,034	+		MPMX19_05875	0.83	-0.5
6,035	-		MPMX19_05875	0.84	-1.3
6,035	-		MPMX19_05875	0.84	-1.3
6,035	-		MPMX19_05875	0.84	-0.5
6,035	-		MPMX19_05875	0.84	-0.8
6,197	+				-0.1
6,198	-				+1.5
6,364	+		MPMX19_05876	0.14	-0.3
6,364	+		MPMX19_05876	0.14	-2.2
6,364	+		MPMX19_05876	0.14	-0.1
6,364	+		MPMX19_05876	0.14	-0.6
6,364	+		MPMX19_05876	0.14	-0.8
6,364	+		MPMX19_05876	0.14	-1.0
6,364	+		MPMX19_05876	0.14	+0.3
6,364	+		MPMX19_05876	0.14	+0.5
6,364	+		MPMX19_05876	0.14	-1.1
6,365	-		MPMX19_05876	0.15	-0.5
6,365	-		MPMX19_05876	0.15	+0.5
6,365	-		MPMX19_05876	0.15	+0.9
6,365	-		MPMX19_05876	0.15	-0.4
6,365	-		MPMX19_05876	0.15	-0.5
6,365	-		MPMX19_05876	0.15	-1.1
6,365	-		MPMX19_05876	0.15	-1.3
6,365	-		MPMX19_05876	0.15	-1.1
6,365	-		MPMX19_05876	0.15	-0.7
6,622	+		MPMX19_05876	0.42	+0.5
6,623	-		MPMX19_05876	0.42	+0.1
6,655	+		MPMX19_05876	0.45	+1.5
6,655	+		MPMX19_05876	0.45	-0.5
6,655	+		MPMX19_05876	0.45	+0.8
6,655	+		MPMX19_05876	0.45	-0.3
6,656	-		MPMX19_05876	0.46	+0.2
7,099	+				-0.5
7,099	+				+0.7
7,099	+				-0.1
7,099	+				-2.5
7,099	+				-1.1
7,099	+				+0.5
7,099	+				+1.5
7,099	+				-0.5
7,099	+				+0.5
7,099	+				-2.4
7,099	+				+0.8
7,099	+				-0.8
7,099	+				-0.5
7,099	+				-1.9
7,100	-				-0.5
7,100	-				-1.1
7,100	-				-0.8
7,100	-				-0.8
7,100	-				-1.1
7,100	-				-0.1
7,100	-				-2.1
7,100	-				-0.3
7,166	+				+0.9
7,166	+				-0.3
7,166	+				-0.8
7,166	+				-0.2
7,166	+				+0.9
7,166	+				-3.0
7,167	-				-0.4
7,167	-				+0.8
7,167	-				+0.2
7,167	-				-0.8
7,167	-				-0.1
7,167	-				-1.3
7,167	-				-0.5
7,167	-				-0.5
7,167	-				-0.8
7,167	-				-1.3
7,167	-				-0.8
7,167	-				-0.8
7,529	+		MPMX19_05877	0.42	-0.2
7,529	+		MPMX19_05877	0.42	+0.5
7,530	-		MPMX19_05877	0.42	-0.4
7,530	-		MPMX19_05877	0.42	+1.5
7,568	+		MPMX19_05877	0.47	-1.3
7,568	+		MPMX19_05877	0.47	-0.8
7,569	-		MPMX19_05877	0.47	-1.3
7,569	-		MPMX19_05877	0.47	-0.7
7,569	-		MPMX19_05877	0.47	-1.5
7,788	+		MPMX19_05877	0.75	-0.1
7,788	+		MPMX19_05877	0.75	+0.2
7,788	+		MPMX19_05877	0.75	+0.0
7,788	+		MPMX19_05877	0.75	-1.5
7,788	+		MPMX19_05877	0.75	+0.2
7,788	+		MPMX19_05877	0.75	+0.3
7,788	+		MPMX19_05877	0.75	+0.5
7,788	+		MPMX19_05877	0.75	-0.7
7,788	+		MPMX19_05877	0.75	+2.5
7,788	+		MPMX19_05877	0.75	-0.8
7,788	+		MPMX19_05877	0.75	-0.5
7,789	-		MPMX19_05877	0.75	+1.1
7,789	-		MPMX19_05877	0.75	-1.2
7,789	-		MPMX19_05877	0.75	+0.5
7,789	-		MPMX19_05877	0.75	-0.1
7,789	-		MPMX19_05877	0.75	+1.5
7,789	-		MPMX19_05877	0.75	+0.3
7,789	-		MPMX19_05877	0.75	-0.8
7,789	-		MPMX19_05877	0.75	-0.8
7,789	-		MPMX19_05877	0.75	-0.2
7,789	-		MPMX19_05877	0.75	-1.1
7,895	+		MPMX19_05877	0.88	-0.6
7,895	+		MPMX19_05877	0.88	-2.1
7,895	+		MPMX19_05877	0.88	+0.3
7,895	+		MPMX19_05877	0.88	+0.2
7,895	+		MPMX19_05877	0.88	-2.8
7,895	+		MPMX19_05877	0.88	-0.8
7,895	+		MPMX19_05877	0.88	-0.7
7,896	-		MPMX19_05877	0.88	+0.2
7,896	-		MPMX19_05877	0.88	-0.1
8,025	+				-0.5
8,025	+				+0.1
8,025	+				+1.0
8,025	+				-0.1
8,025	+				-0.1
8,025	+				+0.3
8,025	+				-2.1
8,025	+				+0.5
8,025	+				+1.5
8,026	-				+0.1
8,026	-				-0.3
8,026	-				-0.1