Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03858

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
104,016	+		MPMX19_03857	0.52	-0.8
104,016	+		MPMX19_03857	0.52	-1.3
104,016	+		MPMX19_03857	0.52	-0.3
104,016	+		MPMX19_03857	0.52	-1.9
104,016	+		MPMX19_03857	0.52	-1.1
104,017	-		MPMX19_03857	0.52	-0.5
104,017	-		MPMX19_03857	0.52	-0.1
104,017	-		MPMX19_03857	0.52	-1.0
104,017	-		MPMX19_03857	0.52	-0.9
104,017	-		MPMX19_03857	0.52	-0.5
104,028	+		MPMX19_03857	0.53	-0.4
104,028	+		MPMX19_03857	0.53	-0.1
104,028	+		MPMX19_03857	0.53	-0.9
104,029	-		MPMX19_03857	0.53	+0.1
104,029	-		MPMX19_03857	0.53	-0.1
104,029	-		MPMX19_03857	0.53	-0.7
104,029	-		MPMX19_03857	0.53	-1.1
104,029	-		MPMX19_03857	0.53	-0.1
104,058	+		MPMX19_03857	0.57	+1.0
104,059	-		MPMX19_03857	0.57	-0.1
104,059	-		MPMX19_03857	0.57	-0.1
104,059	-		MPMX19_03857	0.57	-0.6
104,059	-		MPMX19_03857	0.57	-0.1
104,124	+		MPMX19_03857	0.65	-0.9
104,125	-		MPMX19_03857	0.65	-0.7
104,125	-		MPMX19_03857	0.65	+0.5
104,126	+		MPMX19_03857	0.65	-0.1
104,126	+		MPMX19_03857	0.65	+0.1
104,126	+		MPMX19_03857	0.65	+1.5
104,127	-		MPMX19_03857	0.65	+0.6
104,127	-		MPMX19_03857	0.65	+1.5
104,181	+		MPMX19_03857	0.72	-0.1
104,181	+		MPMX19_03857	0.72	-0.1
104,181	+		MPMX19_03857	0.72	-0.5
104,182	-		MPMX19_03857	0.72	-0.3
104,182	-		MPMX19_03857	0.72	+0.5
104,182	-		MPMX19_03857	0.72	-1.1
104,522	+				-0.5
104,522	+				-1.3
104,523	-				-0.7
104,523	-				+0.2
104,523	-				-0.5
104,524	+				+0.2
104,524	+				-0.3
104,524	+				-2.3
104,524	+				-0.5
104,525	-				-0.7
104,525	-				-1.3
104,525	-				-1.3
104,525	-				+0.0
104,525	-				-0.1
104,636	+		MPMX19_03858	0.11	-0.2
104,636	+		MPMX19_03858	0.11	-0.1
104,636	+		MPMX19_03858	0.11	-2.2
104,636	+		MPMX19_03858	0.11	-0.9
104,636	+		MPMX19_03858	0.11	-0.5
104,637	-		MPMX19_03858	0.11	-1.3
104,637	-		MPMX19_03858	0.11	-0.5
104,927	+		MPMX19_03858	0.32	+0.5
104,927	+		MPMX19_03858	0.32	-1.1
104,927	+		MPMX19_03858	0.32	+0.5
104,928	-		MPMX19_03858	0.32	-1.3
104,928	-		MPMX19_03858	0.32	+0.1
104,928	-		MPMX19_03858	0.32	-0.5
104,928	-		MPMX19_03858	0.32	-0.3
104,928	-		MPMX19_03858	0.32	-0.9
105,137	+		MPMX19_03858	0.47	-1.3
105,137	+		MPMX19_03858	0.47	+0.1
105,137	+		MPMX19_03858	0.47	-0.1
105,137	+		MPMX19_03858	0.47	-0.2
105,137	+		MPMX19_03858	0.47	+0.5
105,138	-		MPMX19_03858	0.47	-1.5
105,138	-		MPMX19_03858	0.47	-0.7
105,138	-		MPMX19_03858	0.47	-2.2
105,138	-		MPMX19_03858	0.47	-1.3
105,138	-		MPMX19_03858	0.47	-0.5
105,138	-		MPMX19_03858	0.47	-1.1
105,140	+		MPMX19_03858	0.47	-0.9
105,140	+		MPMX19_03858	0.47	+1.5
105,140	+		MPMX19_03858	0.47	-0.9
105,140	+		MPMX19_03858	0.47	-1.3
105,140	+		MPMX19_03858	0.47	-1.5
105,140	+		MPMX19_03858	0.47	-0.1
105,140	+		MPMX19_03858	0.47	-0.5
105,140	+		MPMX19_03858	0.47	+0.5
105,141	-		MPMX19_03858	0.47	-1.5
105,141	-		MPMX19_03858	0.47	-2.2
105,141	-		MPMX19_03858	0.47	-0.9
105,141	-		MPMX19_03858	0.47	-1.7
105,141	-		MPMX19_03858	0.47	+0.9
105,141	-		MPMX19_03858	0.47	+0.5
105,141	-		MPMX19_03858	0.47	+0.9
105,171	-		MPMX19_03858	0.49	-1.0
105,171	-		MPMX19_03858	0.49	-0.5
105,171	-		MPMX19_03858	0.49	-0.3
105,171	-		MPMX19_03858	0.49	+0.6
105,258	+		MPMX19_03858	0.55	-0.9
105,371	+		MPMX19_03858	0.63	-0.3
105,371	+		MPMX19_03858	0.63	-1.1
105,371	+		MPMX19_03858	0.63	-1.5
105,371	+		MPMX19_03858	0.63	-0.5
105,371	+		MPMX19_03858	0.63	+0.5
105,372	-		MPMX19_03858	0.63	-0.5
105,372	-		MPMX19_03858	0.63	-1.3
105,372	-		MPMX19_03858	0.63	+1.0
105,372	-		MPMX19_03858	0.63	+0.5
105,372	-		MPMX19_03858	0.63	+1.5
105,372	-		MPMX19_03858	0.63	-0.1
105,596	+		MPMX19_03858	0.79	-0.1
105,596	+		MPMX19_03858	0.79	-2.3
105,597	-		MPMX19_03858	0.79	-2.1
105,597	-		MPMX19_03858	0.79	+0.1
105,597	-		MPMX19_03858	0.79	+1.5
105,597	-		MPMX19_03858	0.79	-0.1
105,597	-		MPMX19_03858	0.79	-0.9
105,620	+		MPMX19_03858	0.80	-0.5
105,621	-		MPMX19_03858	0.80	-0.3
105,621	-		MPMX19_03858	0.80	-0.1
105,621	-		MPMX19_03858	0.80	-0.7
105,621	-		MPMX19_03858	0.80	-0.7
105,650	+		MPMX19_03858	0.83	-1.1
105,650	+		MPMX19_03858	0.83	-0.5
105,651	-		MPMX19_03858	0.83	+0.7
105,651	-		MPMX19_03858	0.83	-0.0
105,651	-		MPMX19_03858	0.83	-0.1
105,651	-		MPMX19_03858	0.83	-1.5
105,651	-		MPMX19_03858	0.83	-0.9
105,651	-		MPMX19_03858	0.83	-0.5
105,784	+				+0.5
105,784	+				-1.2
105,785	-				-0.5
105,807	-				-2.3
105,874	-				-2.1
105,896	+				-1.3
105,896	+				-0.5
105,896	+				-0.5
105,897	-				-0.1
105,897	-				-0.5
105,929	+				-1.1
105,929	+				+0.5
105,929	+				+0.1
105,929	+				-1.2
105,929	+				-1.1
105,929	+				-2.0
105,930	-				-0.9
105,930	-				-1.9
105,930	-				-1.3
105,937	-				-0.1
105,968	+				+0.5
105,968	+				-1.5
105,968	+				-0.1
105,968	+				-0.1
105,968	+				-1.5
105,968	+				+2.0
105,968	+				+0.0
105,968	+				-0.7
105,968	+				+0.1
106,113	+		MPMX19_03859	0.24	-0.5
106,114	-		MPMX19_03859	0.25	-2.0
106,114	-		MPMX19_03859	0.25	-1.3
106,114	-		MPMX19_03859	0.25	+1.5
106,114	-		MPMX19_03859	0.25	-0.1
106,115	+		MPMX19_03859	0.25	+2.5
106,115	+		MPMX19_03859	0.25	+0.9
106,179	+		MPMX19_03859	0.36	-0.5
106,179	+		MPMX19_03859	0.36	-0.9
106,180	-		MPMX19_03859	0.36	+0.9
106,245	+		MPMX19_03859	0.47	-0.5
106,246	-		MPMX19_03859	0.47	+0.8
106,246	-		MPMX19_03859	0.47	-0.5
106,535	+				-0.5
106,670	+		MPMX19_03860	0.11	-1.1
106,670	+		MPMX19_03860	0.11	-0.5
106,671	-		MPMX19_03860	0.12	-0.5
106,671	-		MPMX19_03860	0.12	-0.0
106,671	-		MPMX19_03860	0.12	-0.7
106,671	-		MPMX19_03860	0.12	-1.1
106,693	+		MPMX19_03860	0.15	+0.5
106,693	+		MPMX19_03860	0.15	-1.0
106,693	+		MPMX19_03860	0.15	-0.7
106,693	+		MPMX19_03860	0.15	+0.5
106,730	+		MPMX19_03860	0.21	-0.4
106,736	+		MPMX19_03860	0.22	-1.2
106,736	+		MPMX19_03860	0.22	-2.5
106,736	+		MPMX19_03860	0.22	-0.9
106,737	-		MPMX19_03860	0.22	+3.0
106,737	-		MPMX19_03860	0.22	-0.5
106,737	-		MPMX19_03860	0.22	-0.1
106,769	+		MPMX19_03860	0.27	+0.5
106,769	+		MPMX19_03860	0.27	-0.5
106,769	+		MPMX19_03860	0.27	-1.1
106,769	+		MPMX19_03860	0.27	-0.5
106,769	+		MPMX19_03860	0.27	-0.9
106,769	+		MPMX19_03860	0.27	+1.5
106,769	+		MPMX19_03860	0.27	-0.3
106,769	+		MPMX19_03860	0.27	-0.9
106,769	+		MPMX19_03860	0.27	+0.8
106,769	+		MPMX19_03860	0.27	+1.5
106,769	+		MPMX19_03860	0.27	-1.5
106,770	-		MPMX19_03860	0.27	-1.5
106,770	-		MPMX19_03860	0.27	-0.1
106,770	-		MPMX19_03860	0.27	-2.5
106,770	-		MPMX19_03860	0.27	-0.0
106,770	-		MPMX19_03860	0.27	-0.9
106,770	-		MPMX19_03860	0.27	-2.0
106,770	-		MPMX19_03860	0.27	-1.4
106,770	-		MPMX19_03860	0.27	+0.7
106,770	-		MPMX19_03860	0.27	-1.5
106,770	-		MPMX19_03860	0.27	-0.1
106,770	-		MPMX19_03860	0.27	-2.1
106,770	-		MPMX19_03860	0.27	-1.3
106,770	-		MPMX19_03860	0.27	-0.5
106,770	-		MPMX19_03860	0.27	-0.5
106,770	-		MPMX19_03860	0.27	-0.7
106,770	-		MPMX19_03860	0.27	-1.7
106,770	-		MPMX19_03860	0.27	-0.5
106,770	-		MPMX19_03860	0.27	-1.7
106,770	-		MPMX19_03860	0.27	+0.1
106,770	-		MPMX19_03860	0.27	+0.5
106,770	-		MPMX19_03860	0.27	+0.7
106,770	-		MPMX19_03860	0.27	-0.0
106,845	+		MPMX19_03860	0.39	-0.9
106,845	+		MPMX19_03860	0.39	+0.0
106,845	+		MPMX19_03860	0.39	-1.1
106,845	+		MPMX19_03860	0.39	-0.1
106,868	+		MPMX19_03860	0.43	-1.0
106,869	-		MPMX19_03860	0.43	-1.0
106,881	+		MPMX19_03860	0.45	-0.7
106,881	+		MPMX19_03860	0.45	-1.1
106,881	+		MPMX19_03860	0.45	+0.1
106,881	+		MPMX19_03860	0.45	-1.1
106,881	+		MPMX19_03860	0.45	-0.1
106,881	+		MPMX19_03860	0.45	-1.9
106,881	+		MPMX19_03860	0.45	-0.1
106,882	-		MPMX19_03860	0.45	+0.9
106,882	-		MPMX19_03860	0.45	-2.7
106,882	-		MPMX19_03860	0.45	-1.0
106,882	-		MPMX19_03860	0.45	+0.2
106,882	-		MPMX19_03860	0.45	+1.5
106,882	-		MPMX19_03860	0.45	-0.9
106,882	-		MPMX19_03860	0.45	+1.5
106,882	-		MPMX19_03860	0.45	-0.1
106,883	-		MPMX19_03860	0.45	-0.5