Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03690

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,129,340	+		MPMX19_03688	0.48	-0.6
1,129,340	+		MPMX19_03688	0.48	+0.4
1,129,340	+		MPMX19_03688	0.48	-0.6
1,129,340	+		MPMX19_03688	0.48	+0.7
1,129,341	-		MPMX19_03688	0.48	-1.3
1,129,341	-		MPMX19_03688	0.48	-1.8
1,129,341	-		MPMX19_03688	0.48	-0.8
1,129,884	+		MPMX19_03689	0.43	-1.1
1,129,884	+		MPMX19_03689	0.43	-1.3
1,129,884	+		MPMX19_03689	0.43	+1.1
1,130,016	+		MPMX19_03689	0.70	-0.2
1,130,016	+		MPMX19_03689	0.70	-1.5
1,130,016	+		MPMX19_03689	0.70	-0.8
1,130,016	+		MPMX19_03689	0.70	-0.3
1,130,016	+		MPMX19_03689	0.70	+0.4
1,130,016	+		MPMX19_03689	0.70	-0.3
1,130,016	+		MPMX19_03689	0.70	-0.9
1,130,016	+		MPMX19_03689	0.70	-0.2
1,130,016	+		MPMX19_03689	0.70	-0.7
1,130,016	+		MPMX19_03689	0.70	-0.9
1,130,017	-		MPMX19_03689	0.71	+1.0
1,130,017	-		MPMX19_03689	0.71	-0.6
1,130,017	-		MPMX19_03689	0.71	-1.3
1,130,017	-		MPMX19_03689	0.71	-1.3
1,130,017	-		MPMX19_03689	0.71	-0.3
1,130,017	-		MPMX19_03689	0.71	+0.7
1,130,017	-		MPMX19_03689	0.71	-0.6
1,130,017	-		MPMX19_03689	0.71	+0.1
1,130,017	-		MPMX19_03689	0.71	+0.1
1,130,017	-		MPMX19_03689	0.71	+0.1
1,130,017	-		MPMX19_03689	0.71	-0.9
1,130,017	-		MPMX19_03689	0.71	+0.2
1,130,151	+				-0.3
1,130,151	+				-1.1
1,130,152	-				+1.7
1,130,152	-				-1.8
1,130,153	+				-0.6
1,130,153	+				+0.3
1,130,153	+				-1.6
1,130,153	+				-0.9
1,130,154	-				-0.1
1,130,154	-				-1.8
1,130,154	-				-0.3
1,130,154	-				-1.2
1,130,154	-				-0.6
1,130,165	+				+0.2
1,130,166	-				+0.2
1,130,166	-				-0.9
1,130,180	+				-0.9
1,130,184	+				-0.3
1,130,184	+				-1.3
1,130,184	+				-0.5
1,130,184	+				+0.1
1,130,184	+				+0.1
1,130,184	+				-0.5
1,130,184	+				+0.7
1,130,184	+				-1.9
1,130,184	+				-0.3
1,130,184	+				-1.0
1,130,184	+				-0.4
1,130,184	+				-0.1
1,130,184	+				+0.5
1,130,184	+				-1.1
1,130,184	+				+1.4
1,130,185	-				+1.3
1,130,185	-				-1.7
1,130,185	-				+0.1
1,130,185	-				+0.0
1,130,185	-				+0.4
1,130,185	-				-0.3
1,130,185	-				+0.5
1,130,185	-				+0.2
1,130,185	-				-1.8
1,130,185	-				-0.5
1,130,185	-				-1.9
1,130,185	-				-0.6
1,130,273	+				-1.5
1,130,273	+				-0.3
1,130,273	+				-1.1
1,130,273	+				+0.1
1,130,273	+				+1.7
1,130,273	+				-0.2
1,130,273	+				-1.4
1,130,273	+				-1.8
1,130,273	+				-1.3
1,130,273	+				+0.1
1,130,274	-				-0.1
1,130,274	-				+1.0
1,130,274	-				+0.4
1,130,274	-				-0.6
1,130,274	-				+0.4
1,130,274	-				-0.5
1,130,274	-				-2.1
1,130,274	-				-1.0
1,130,274	-				-1.4
1,130,387	+		MPMX19_03690	0.12	+0.3
1,130,387	+		MPMX19_03690	0.12	-0.6
1,130,387	+		MPMX19_03690	0.12	+0.1
1,130,387	+		MPMX19_03690	0.12	-0.2
1,130,388	-		MPMX19_03690	0.12	-2.7
1,130,388	-		MPMX19_03690	0.12	+1.5
1,130,388	-		MPMX19_03690	0.12	-0.9
1,130,388	-		MPMX19_03690	0.12	-0.2
1,130,388	-		MPMX19_03690	0.12	-1.5
1,130,405	+		MPMX19_03690	0.13	-0.9
1,130,405	+		MPMX19_03690	0.13	+1.4
1,130,405	+		MPMX19_03690	0.13	+0.7
1,130,405	+		MPMX19_03690	0.13	-0.3
1,130,405	+		MPMX19_03690	0.13	-0.3
1,130,406	-		MPMX19_03690	0.13	-0.3
1,130,406	-		MPMX19_03690	0.13	+0.7
1,130,406	-		MPMX19_03690	0.13	+0.4
1,130,406	-		MPMX19_03690	0.13	+0.6
1,130,407	+		MPMX19_03690	0.13	+1.0
1,130,407	+		MPMX19_03690	0.13	-1.5
1,130,407	+		MPMX19_03690	0.13	-0.5
1,130,407	+		MPMX19_03690	0.13	-0.6
1,130,407	+		MPMX19_03690	0.13	-1.6
1,130,407	+		MPMX19_03690	0.13	-0.5
1,130,407	+		MPMX19_03690	0.13	-0.3
1,130,407	+		MPMX19_03690	0.13	-0.9
1,130,407	+		MPMX19_03690	0.13	+0.9
1,130,407	+		MPMX19_03690	0.13	+0.7
1,130,408	-		MPMX19_03690	0.13	+0.4
1,130,408	-		MPMX19_03690	0.13	-0.3
1,130,408	-		MPMX19_03690	0.13	+1.0
1,130,408	-		MPMX19_03690	0.13	+1.0
1,130,408	-		MPMX19_03690	0.13	-1.1
1,130,408	-		MPMX19_03690	0.13	+0.7
1,130,408	-		MPMX19_03690	0.13	-0.6
1,130,408	-		MPMX19_03690	0.13	+0.7
1,130,408	-		MPMX19_03690	0.13	-1.8
1,130,408	-		MPMX19_03690	0.13	+0.3
1,130,408	-		MPMX19_03690	0.13	-1.1
1,130,408	-		MPMX19_03690	0.13	+2.7
1,130,459	+		MPMX19_03690	0.17	-1.3
1,130,461	+		MPMX19_03690	0.17	-1.1
1,130,461	+		MPMX19_03690	0.17	-0.1
1,130,461	+		MPMX19_03690	0.17	-0.3
1,130,461	+		MPMX19_03690	0.17	-0.6
1,130,461	+		MPMX19_03690	0.17	+0.9
1,130,461	+		MPMX19_03690	0.17	-1.5
1,130,461	+		MPMX19_03690	0.17	-0.3
1,130,462	-		MPMX19_03690	0.17	-0.6
1,130,462	-		MPMX19_03690	0.17	-0.9
1,130,462	-		MPMX19_03690	0.17	+0.7
1,130,462	-		MPMX19_03690	0.17	-1.7
1,130,462	-		MPMX19_03690	0.17	-1.9
1,130,909	+		MPMX19_03690	0.50	-0.6
1,130,909	+		MPMX19_03690	0.50	-1.0
1,130,909	+		MPMX19_03690	0.50	-0.6
1,130,909	+		MPMX19_03690	0.50	-1.9
1,130,909	+		MPMX19_03690	0.50	-1.8
1,130,909	+		MPMX19_03690	0.50	-0.8
1,130,910	-		MPMX19_03690	0.50	+0.1
1,130,910	-		MPMX19_03690	0.50	-0.5
1,130,910	-		MPMX19_03690	0.50	-0.6
1,130,910	-		MPMX19_03690	0.50	-1.0
1,130,910	-		MPMX19_03690	0.50	+0.4
1,130,910	-		MPMX19_03690	0.50	+1.1
1,130,910	-		MPMX19_03690	0.50	-0.6
1,130,910	-		MPMX19_03690	0.50	-2.2
1,130,910	-		MPMX19_03690	0.50	-0.3
1,130,910	-		MPMX19_03690	0.50	-0.7
1,130,910	-		MPMX19_03690	0.50	+0.9
1,130,910	-		MPMX19_03690	0.50	-0.3
1,130,957	+		MPMX19_03690	0.54	-1.3
1,130,957	+		MPMX19_03690	0.54	-1.5
1,130,958	-		MPMX19_03690	0.54	-1.9
1,130,958	-		MPMX19_03690	0.54	-0.3
1,130,958	-		MPMX19_03690	0.54	-0.3
1,130,958	-		MPMX19_03690	0.54	-1.5
1,130,991	-		MPMX19_03690	0.56	-0.6
1,131,369	-		MPMX19_03690	0.84	-1.5
1,131,566	+				-1.1
1,131,566	+				-0.6
1,131,566	+				-2.0
1,131,566	+				+0.1
1,131,566	+				-1.3
1,131,567	-				+0.5
1,131,567	-				-1.1
1,131,567	-				-2.5
1,131,567	-				-1.3
1,131,567	-				-0.8
1,131,615	+				+0.1
1,131,615	+				-1.6
1,131,616	-				+0.7
1,131,616	-				+0.2
1,131,696	+				-1.0
1,131,697	-				-0.1
1,131,697	-				+0.7
1,131,697	-				+0.0
1,131,798	+		MPMX19_03691	0.30	+1.3
1,131,866	+		MPMX19_03691	0.46	+0.7
1,131,866	+		MPMX19_03691	0.46	+0.7
1,131,867	-		MPMX19_03691	0.46	-0.1
1,131,867	-		MPMX19_03691	0.46	+1.1
1,131,867	-		MPMX19_03691	0.46	+0.1
1,131,867	-		MPMX19_03691	0.46	+1.7
1,131,867	-		MPMX19_03691	0.46	-0.3
1,131,875	+		MPMX19_03691	0.48	-1.8
1,131,875	+		MPMX19_03691	0.48	-0.6
1,131,875	+		MPMX19_03691	0.48	-2.1
1,131,876	-		MPMX19_03691	0.48	-0.3
1,131,876	-		MPMX19_03691	0.48	+0.0
1,131,876	-		MPMX19_03691	0.48	+0.3
1,131,876	-		MPMX19_03691	0.48	-1.1
1,131,989	+		MPMX19_03691	0.74	+0.1
1,131,989	+		MPMX19_03691	0.74	-0.5
1,131,989	+		MPMX19_03691	0.74	-1.3
1,131,989	+		MPMX19_03691	0.74	+1.7
1,131,990	-		MPMX19_03691	0.74	-1.3
1,131,990	-		MPMX19_03691	0.74	-0.5
1,131,990	-		MPMX19_03691	0.74	+0.1
1,132,043	+		MPMX19_03691	0.86	-0.5
1,132,043	+		MPMX19_03691	0.86	+0.1
1,132,044	-		MPMX19_03691	0.87	-0.9
1,132,074	-				-0.6
1,132,074	-				-0.3
1,132,100	+				-0.6
1,132,100	+				-0.2
1,132,120	+				-0.8
1,132,121	-				-0.5
1,132,174	+				-1.2
1,132,174	+				-0.9
1,132,174	+				+0.1
1,132,175	-				+0.1
1,132,175	-				-0.0
1,132,175	-				+0.7
1,132,393	+		MPMX19_03692	0.25	+0.1
1,132,393	+		MPMX19_03692	0.25	-3.3
1,132,393	+		MPMX19_03692	0.25	-2.0
1,132,393	+		MPMX19_03692	0.25	+0.4
1,132,393	+		MPMX19_03692	0.25	-1.5
1,132,393	+		MPMX19_03692	0.25	-1.8
1,132,393	+		MPMX19_03692	0.25	-1.6
1,132,393	+		MPMX19_03692	0.25	+0.0
1,132,393	+		MPMX19_03692	0.25	-0.3
1,132,393	+		MPMX19_03692	0.25	-1.3
1,132,393	+		MPMX19_03692	0.25	-1.5
1,132,394	-		MPMX19_03692	0.25	+0.4
1,132,394	-		MPMX19_03692	0.25	-2.1
1,132,394	-		MPMX19_03692	0.25	-0.6
1,132,394	-		MPMX19_03692	0.25	+2.3
1,132,394	-		MPMX19_03692	0.25	-1.1
1,132,459	+		MPMX19_03692	0.33	-1.5
1,132,459	+		MPMX19_03692	0.33	-0.9
1,132,460	-		MPMX19_03692	0.34	+0.1
1,132,460	-		MPMX19_03692	0.34	-0.5
1,132,460	-		MPMX19_03692	0.34	-0.9
1,132,460	-		MPMX19_03692	0.34	+0.2
1,132,491	+		MPMX19_03692	0.37	+1.0
1,132,491	+		MPMX19_03692	0.37	-0.3
1,132,492	-		MPMX19_03692	0.38	-0.1
1,132,492	-		MPMX19_03692	0.38	+0.1
1,132,492	-		MPMX19_03692	0.38	+0.4
1,132,492	-		MPMX19_03692	0.38	-0.1
1,132,492	-		MPMX19_03692	0.38	-0.3
1,132,537	+		MPMX19_03692	0.43	+0.3
1,132,537	+		MPMX19_03692	0.43	+0.5
1,132,537	+		MPMX19_03692	0.43	+1.1
1,132,537	+		MPMX19_03692	0.43	-0.3
1,132,538	-		MPMX19_03692	0.43	-0.3
1,132,538	-		MPMX19_03692	0.43	-2.8
1,132,538	-		MPMX19_03692	0.43	-0.6