Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02864

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
108,406	+		MPMX19_02863	0.64	-0.9
108,407	-		MPMX19_02863	0.64	+0.7
108,407	-		MPMX19_02863	0.64	-0.3
108,496	+		MPMX19_02863	0.68	-1.3
108,496	+		MPMX19_02863	0.68	+0.1
108,496	+		MPMX19_02863	0.68	+0.1
108,496	+		MPMX19_02863	0.68	+0.1
108,496	+		MPMX19_02863	0.68	-1.6
108,496	+		MPMX19_02863	0.68	-1.3
108,496	+		MPMX19_02863	0.68	+1.4
108,496	+		MPMX19_02863	0.68	+0.1
108,496	+		MPMX19_02863	0.68	-0.6
108,496	+		MPMX19_02863	0.68	-0.4
108,496	+		MPMX19_02863	0.68	-1.6
108,496	+		MPMX19_02863	0.68	-0.6
108,497	-		MPMX19_02863	0.68	-0.1
108,497	-		MPMX19_02863	0.68	-1.8
108,497	-		MPMX19_02863	0.68	-0.5
108,497	-		MPMX19_02863	0.68	-1.1
108,497	-		MPMX19_02863	0.68	-0.4
108,497	-		MPMX19_02863	0.68	-0.6
108,497	-		MPMX19_02863	0.68	-1.6
108,497	-		MPMX19_02863	0.68	+0.7
108,497	-		MPMX19_02863	0.68	+1.3
108,523	+		MPMX19_02863	0.69	-1.3
108,523	+		MPMX19_02863	0.69	-1.1
108,523	+		MPMX19_02863	0.69	-0.3
108,524	-		MPMX19_02863	0.69	+1.1
108,524	-		MPMX19_02863	0.69	+0.1
108,532	+		MPMX19_02863	0.69	-1.4
108,532	+		MPMX19_02863	0.69	-1.8
108,533	-		MPMX19_02863	0.69	-1.9
108,544	+		MPMX19_02863	0.70	+0.1
108,544	+		MPMX19_02863	0.70	-0.3
108,545	-		MPMX19_02863	0.70	+0.7
108,545	-		MPMX19_02863	0.70	-0.6
108,545	-		MPMX19_02863	0.70	+0.7
108,545	-		MPMX19_02863	0.70	-0.6
108,545	-		MPMX19_02863	0.70	+1.0
108,545	-		MPMX19_02863	0.70	-1.8
108,545	-		MPMX19_02863	0.70	-0.3
108,727	+		MPMX19_02863	0.78	+0.2
108,727	+		MPMX19_02863	0.78	-0.6
108,727	+		MPMX19_02863	0.78	-0.6
108,727	+		MPMX19_02863	0.78	-1.2
108,727	+		MPMX19_02863	0.78	+1.3
108,728	-		MPMX19_02863	0.78	+0.7
108,728	-		MPMX19_02863	0.78	+1.1
108,728	-		MPMX19_02863	0.78	-2.0
108,728	-		MPMX19_02863	0.78	+0.3
108,728	-		MPMX19_02863	0.78	-0.9
108,728	-		MPMX19_02863	0.78	+2.7
108,728	-		MPMX19_02863	0.78	-1.1
108,847	+		MPMX19_02863	0.83	+0.5
108,847	+		MPMX19_02863	0.83	-1.3
108,847	+		MPMX19_02863	0.83	+0.7
108,848	-		MPMX19_02863	0.83	-0.1
108,856	+		MPMX19_02863	0.84	-0.6
108,856	+		MPMX19_02863	0.84	-1.1
108,856	+		MPMX19_02863	0.84	+1.1
108,856	+		MPMX19_02863	0.84	-0.2
108,856	+		MPMX19_02863	0.84	-1.0
108,856	+		MPMX19_02863	0.84	+0.7
108,856	+		MPMX19_02863	0.84	-1.1
108,856	+		MPMX19_02863	0.84	-1.1
108,856	+		MPMX19_02863	0.84	+0.7
108,856	+		MPMX19_02863	0.84	-0.3
108,856	+		MPMX19_02863	0.84	-0.4
108,856	+		MPMX19_02863	0.84	-1.1
108,856	+		MPMX19_02863	0.84	-0.1
108,857	-		MPMX19_02863	0.84	-0.1
108,857	-		MPMX19_02863	0.84	-0.3
108,857	-		MPMX19_02863	0.84	+0.7
108,857	-		MPMX19_02863	0.84	-0.9
108,857	-		MPMX19_02863	0.84	-1.1
108,857	-		MPMX19_02863	0.84	+0.4
108,857	-		MPMX19_02863	0.84	+0.5
108,857	-		MPMX19_02863	0.84	-1.5
108,857	-		MPMX19_02863	0.84	-0.9
108,857	-		MPMX19_02863	0.84	+0.1
108,857	-		MPMX19_02863	0.84	-0.1
108,857	-		MPMX19_02863	0.84	+0.1
108,857	-		MPMX19_02863	0.84	-0.6
108,857	-		MPMX19_02863	0.84	-1.8
108,857	-		MPMX19_02863	0.84	+0.1
108,857	-		MPMX19_02863	0.84	-1.3
108,862	+		MPMX19_02863	0.84	-2.6
108,862	+		MPMX19_02863	0.84	+0.1
108,862	+		MPMX19_02863	0.84	-0.2
108,863	-		MPMX19_02863	0.84	-0.1
108,863	-		MPMX19_02863	0.84	-0.6
108,863	-		MPMX19_02863	0.84	-0.3
108,863	-		MPMX19_02863	0.84	+0.4
108,863	-		MPMX19_02863	0.84	-1.1
108,961	+		MPMX19_02863	0.88	-0.1
108,961	+		MPMX19_02863	0.88	+0.7
108,961	+		MPMX19_02863	0.88	-1.8
108,961	+		MPMX19_02863	0.88	-0.9
108,961	+		MPMX19_02863	0.88	+0.1
108,961	+		MPMX19_02863	0.88	+1.3
108,961	+		MPMX19_02863	0.88	-0.1
108,961	+		MPMX19_02863	0.88	+0.4
108,962	-		MPMX19_02863	0.88	-0.2
108,962	-		MPMX19_02863	0.88	-0.1
108,962	-		MPMX19_02863	0.88	-1.6
108,962	-		MPMX19_02863	0.88	+3.7
108,962	-		MPMX19_02863	0.88	-2.3
109,063	+				-0.3
109,063	+				-0.2
109,063	+				+0.1
109,064	-				-1.3
109,064	-				+0.1
109,093	+				-0.3
109,094	-				-0.1
109,129	+				+0.1
109,153	+				-0.2
109,153	+				-1.6
109,153	+				-0.9
109,153	+				+2.7
109,153	+				-2.3
109,153	+				+1.7
109,154	-				+0.1
109,154	-				-2.5
109,154	-				-0.6
109,154	-				-0.9
109,154	-				+0.1
109,154	-				+1.5
109,154	-				+0.7
109,154	-				+1.4
109,154	-				-0.3
109,154	-				-0.9
109,154	-				-0.5
109,154	-				+0.1
109,300	+				-1.1
109,300	+				-1.0
109,300	+				+0.1
109,301	-				+1.7
109,301	-				+0.9
109,301	-				-0.3
109,301	-				-2.2
109,301	-				-0.3
109,301	-				-1.9
109,592	+		MPMX19_02864	0.40	-0.3
109,592	+		MPMX19_02864	0.40	-0.9
109,592	+		MPMX19_02864	0.40	-0.6
109,592	+		MPMX19_02864	0.40	-1.3
109,592	+		MPMX19_02864	0.40	-1.9
109,592	+		MPMX19_02864	0.40	-0.3
109,592	+		MPMX19_02864	0.40	-0.9
109,593	-		MPMX19_02864	0.40	-1.3
109,593	-		MPMX19_02864	0.40	-1.6
109,593	-		MPMX19_02864	0.40	-1.4
109,593	-		MPMX19_02864	0.40	-0.6
109,593	-		MPMX19_02864	0.40	+1.7
109,593	-		MPMX19_02864	0.40	-0.1
109,593	-		MPMX19_02864	0.40	-1.1
109,593	-		MPMX19_02864	0.40	-0.3
109,593	-		MPMX19_02864	0.40	+2.1
109,593	-		MPMX19_02864	0.40	-0.1
109,593	-		MPMX19_02864	0.40	-0.6
109,593	-		MPMX19_02864	0.40	+0.1
109,598	+		MPMX19_02864	0.41	-1.5
109,599	-		MPMX19_02864	0.41	-0.8
109,697	+		MPMX19_02864	0.55	-1.1
109,697	+		MPMX19_02864	0.55	-0.9
109,697	+		MPMX19_02864	0.55	-0.3
109,697	+		MPMX19_02864	0.55	+1.7
109,697	+		MPMX19_02864	0.55	-1.5
109,697	+		MPMX19_02864	0.55	-0.6
109,697	+		MPMX19_02864	0.55	+0.6
109,698	-		MPMX19_02864	0.56	+1.0
109,698	-		MPMX19_02864	0.56	-0.9
109,730	+		MPMX19_02864	0.60	-1.9
109,730	+		MPMX19_02864	0.60	-0.9
109,730	+		MPMX19_02864	0.60	-0.9
109,730	+		MPMX19_02864	0.60	-1.5
109,730	+		MPMX19_02864	0.60	-2.5
109,730	+		MPMX19_02864	0.60	-0.6
109,730	+		MPMX19_02864	0.60	-1.1
109,731	-		MPMX19_02864	0.60	-1.2
109,731	-		MPMX19_02864	0.60	+1.7
109,731	-		MPMX19_02864	0.60	-1.6
109,731	-		MPMX19_02864	0.60	-0.6
109,731	-		MPMX19_02864	0.60	-0.3
109,731	-		MPMX19_02864	0.60	-2.1
109,731	-		MPMX19_02864	0.60	+0.1
109,775	+		MPMX19_02864	0.67	-0.1
109,776	-		MPMX19_02864	0.67	-1.0
109,776	-		MPMX19_02864	0.67	-0.9
109,886	+		MPMX19_02864	0.83	-1.7
109,887	-		MPMX19_02864	0.83	+0.1
109,887	-		MPMX19_02864	0.83	-1.1
109,887	-		MPMX19_02864	0.83	-1.6
109,887	-		MPMX19_02864	0.83	-0.1
109,887	-		MPMX19_02864	0.83	-1.8
109,967	+				+0.7
109,967	+				+0.1
109,968	-				+0.2
110,221	+		MPMX19_02865	0.31	+0.7
110,329	+		MPMX19_02865	0.48	+0.4
110,329	+		MPMX19_02865	0.48	+0.8
110,329	+		MPMX19_02865	0.48	+0.8
110,329	+		MPMX19_02865	0.48	-0.3
110,329	+		MPMX19_02865	0.48	+0.5
110,329	+		MPMX19_02865	0.48	-0.5
110,330	-		MPMX19_02865	0.48	+0.7
110,330	-		MPMX19_02865	0.48	-1.5
110,569	+		MPMX19_02865	0.84	+0.4
110,569	+		MPMX19_02865	0.84	-1.1
110,569	+		MPMX19_02865	0.84	-0.6
110,569	+		MPMX19_02865	0.84	-0.3
110,570	-		MPMX19_02865	0.84	+0.1
110,709	+				-1.5
110,709	+				+0.0
110,709	+				+0.5
110,709	+				-0.1
110,710	-				-1.2
110,754	+				-0.2
110,754	+				-0.2
110,754	+				+1.4
110,754	+				-1.1
110,755	-				-0.9
110,755	-				-1.3
110,755	-				+0.9
110,755	-				-0.4
110,896	-		MPMX19_02866	0.21	-0.8
110,896	-		MPMX19_02866	0.21	+1.3
110,896	-		MPMX19_02866	0.21	-0.8
110,896	-		MPMX19_02866	0.21	+0.1