Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02265

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,382,122	-		MPMX19_02264	0.71	-2.0
2,382,122	-		MPMX19_02264	0.71	+1.1
2,382,174	+		MPMX19_02264	0.84	-1.4
2,382,176	+		MPMX19_02264	0.84	-0.7
2,382,176	+		MPMX19_02264	0.84	-0.3
2,382,176	+		MPMX19_02264	0.84	+0.2
2,382,176	+		MPMX19_02264	0.84	-0.4
2,382,176	+		MPMX19_02264	0.84	-0.6
2,382,176	+		MPMX19_02264	0.84	-0.1
2,382,176	+		MPMX19_02264	0.84	-1.2
2,382,176	+		MPMX19_02264	0.84	-0.2
2,382,176	+		MPMX19_02264	0.84	-0.7
2,382,176	+		MPMX19_02264	0.84	-2.4
2,382,177	-		MPMX19_02264	0.84	-0.9
2,382,177	-		MPMX19_02264	0.84	+0.4
2,382,177	-		MPMX19_02264	0.84	-1.7
2,382,177	-		MPMX19_02264	0.84	-1.7
2,382,177	-		MPMX19_02264	0.84	-1.7
2,382,177	-		MPMX19_02264	0.84	-1.4
2,382,177	-		MPMX19_02264	0.84	-0.9
2,382,177	-		MPMX19_02264	0.84	+0.4
2,382,177	-		MPMX19_02264	0.84	-2.2
2,382,177	-		MPMX19_02264	0.84	-0.9
2,382,177	-		MPMX19_02264	0.84	-0.2
2,382,177	-		MPMX19_02264	0.84	-1.7
2,382,177	-		MPMX19_02264	0.84	+0.6
2,382,221	+				-0.2
2,382,221	+				+0.4
2,382,221	+				-0.9
2,382,221	+				-1.4
2,382,221	+				-0.3
2,382,221	+				-1.4
2,382,221	+				-0.4
2,382,221	+				+0.5
2,382,221	+				+0.4
2,382,221	+				+0.3
2,382,221	+				-0.2
2,382,222	-				-1.8
2,382,222	-				-1.2
2,382,222	-				-1.4
2,382,222	-				-1.2
2,382,222	-				-0.8
2,382,222	-				+0.4
2,382,222	-				-1.2
2,382,222	-				+0.4
2,382,222	-				-2.0
2,382,222	-				-1.2
2,382,222	-				-0.2
2,382,228	+				-0.9
2,382,228	+				-0.7
2,382,228	+				-0.6
2,382,228	+				-0.2
2,382,228	+				-0.2
2,382,228	+				-0.7
2,382,228	+				-0.6
2,382,228	+				-1.6
2,382,228	+				-0.2
2,382,228	+				+0.3
2,382,228	+				-0.6
2,382,228	+				+1.4
2,382,228	+				-0.1
2,382,228	+				-2.4
2,382,228	+				-1.2
2,382,228	+				-1.1
2,382,228	+				-1.2
2,382,228	+				-1.4
2,382,229	-				-1.0
2,382,229	-				-1.4
2,382,229	-				-2.3
2,382,229	-				-2.5
2,382,229	-				-1.3
2,382,229	-				-1.3
2,382,229	-				-1.5
2,382,229	-				-1.2
2,382,229	-				-0.7
2,382,229	-				-0.9
2,382,229	-				+0.4
2,382,229	-				-0.9
2,382,229	-				+0.1
2,382,229	-				-1.2
2,382,229	-				-0.2
2,382,229	-				-0.3
2,382,229	-				-0.2
2,382,229	-				-0.7
2,382,229	-				-0.3
2,382,229	-				+0.5
2,382,229	-				-0.2
2,382,234	+				-0.7
2,382,234	+				+0.8
2,382,234	+				-0.3
2,382,234	+				+0.4
2,382,234	+				-0.9
2,382,234	+				-0.2
2,382,234	+				-2.2
2,382,234	+				+0.0
2,382,234	+				-0.8
2,382,234	+				-0.8
2,382,235	-				-0.7
2,382,235	-				-0.6
2,382,235	-				-0.3
2,382,235	-				+0.0
2,382,235	-				-0.9
2,382,235	-				+0.4
2,382,235	-				+1.4
2,382,235	-				-1.6
2,382,235	-				-1.4
2,382,235	-				+0.3
2,382,235	-				+0.4
2,382,235	-				+0.4
2,382,235	-				+0.7
2,382,235	-				-1.7
2,382,252	+				-0.2
2,382,252	+				-0.2
2,382,252	+				-0.2
2,382,252	+				-0.4
2,382,252	+				-0.7
2,382,252	+				-1.4
2,382,252	+				+1.0
2,382,252	+				-0.7
2,382,252	+				-1.0
2,382,252	+				-1.4
2,382,252	+				-0.2
2,382,252	+				-1.5
2,382,252	+				+0.4
2,382,252	+				+0.1
2,382,252	+				+0.4
2,382,252	+				-2.6
2,382,252	+				-0.9
2,382,252	+				-0.7
2,382,252	+				-0.4
2,382,252	+				-0.7
2,382,252	+				+0.9
2,382,252	+				-1.2
2,382,252	+				-0.1
2,382,252	+				-1.4
2,382,252	+				-0.9
2,382,252	+				-1.4
2,382,253	-				+0.1
2,382,253	-				+1.4
2,382,253	-				+0.2
2,382,253	-				-1.2
2,382,253	-				+1.4
2,382,253	-				-1.2
2,382,253	-				-2.8
2,382,253	-				-0.6
2,382,253	-				-1.2
2,382,253	-				-0.2
2,382,253	-				-0.4
2,382,253	-				-0.9
2,382,253	-				+0.7
2,382,253	-				-1.6
2,382,253	-				+0.4
2,382,253	-				-1.2
2,382,253	-				-0.2
2,382,253	-				-1.1
2,382,253	-				-0.2
2,382,253	-				-0.7
2,382,253	-				-2.0
2,382,334	+				-0.6
2,382,334	+				-0.9
2,382,334	+				-1.5
2,382,334	+				+2.4
2,382,334	+				-2.0
2,382,334	+				-0.2
2,382,334	+				+1.4
2,382,334	+				+0.1
2,382,335	-				-0.1
2,382,335	-				-0.6
2,382,335	-				-0.2
2,382,335	-				-0.0
2,382,335	-				-2.3
2,382,335	-				-2.2
2,382,335	-				-0.7
2,382,362	+				+0.1
2,382,362	+				-0.3
2,382,362	+				-0.9
2,382,362	+				-1.7
2,382,362	+				+0.6
2,382,362	+				-0.2
2,382,362	+				-0.2
2,382,362	+				-0.2
2,382,362	+				-1.7
2,382,362	+				+0.4
2,382,363	-				-0.6
2,382,363	-				+0.1
2,382,363	-				-2.1
2,382,363	-				-1.9
2,382,363	-				+0.4
2,382,363	-				-0.2
2,382,363	-				-2.8
2,382,363	-				-0.2
2,382,363	-				-0.3
2,382,363	-				-0.7
2,382,363	-				+1.4
2,382,363	-				-0.9
2,382,363	-				-0.6
2,382,395	+				+1.0
2,382,396	-				+0.1
2,382,396	-				-1.6
2,382,396	-				+0.2
2,382,396	-				+0.2
2,382,396	-				-0.6
2,382,400	+				-1.0
2,382,400	+				-0.9
2,382,400	+				+0.0
2,382,400	+				+1.0
2,382,400	+				-0.5
2,382,400	+				-1.7
2,382,401	-				-1.7
2,382,401	-				-1.7
2,382,401	-				+1.1
2,382,401	-				-1.2
2,382,401	-				-0.9
2,382,401	-				-0.2
2,382,401	-				-0.2
2,382,401	-				-0.9
2,382,401	-				+0.1
2,382,408	+				-0.4
2,382,408	+				+0.9
2,382,409	-				-0.6
2,382,523	+				+0.7
2,382,523	+				+0.8
2,382,524	-				-0.0
2,382,564	-				-0.6
2,382,565	+				-1.7
2,382,566	-				+0.2
2,382,578	+				-0.6
2,382,578	+				+0.1
2,382,580	+				+0.4
2,382,632	-				+0.8
2,382,632	-				+0.4
2,383,119	-				+0.4
2,383,125	-				+1.1
2,383,125	-				-0.3
2,383,125	-				+0.7
2,383,170	+				+1.4
2,383,170	+				+1.0
2,383,170	+				-0.2
2,383,171	-				-0.4
2,383,171	-				+0.1
2,383,171	-				-1.0
2,383,241	+		MPMX19_02265	0.14	-1.2
2,383,257	+		MPMX19_02265	0.16	+0.1
2,383,290	+		MPMX19_02265	0.20	+0.5
2,383,290	+		MPMX19_02265	0.20	+0.1
2,383,290	+		MPMX19_02265	0.20	+1.2
2,383,290	+		MPMX19_02265	0.20	+0.6
2,383,291	-		MPMX19_02265	0.20	-1.6
2,383,291	-		MPMX19_02265	0.20	-1.0
2,383,310	+		MPMX19_02265	0.22	-0.4
2,383,313	+		MPMX19_02265	0.22	-0.4
2,383,331	+		MPMX19_02265	0.24	-0.2
2,383,332	-		MPMX19_02265	0.24	-0.2
2,383,359	+		MPMX19_02265	0.27	-1.5
2,383,360	-		MPMX19_02265	0.27	+0.0
2,383,360	-		MPMX19_02265	0.27	+0.9
2,383,413	+		MPMX19_02265	0.32	+1.3
2,383,413	+		MPMX19_02265	0.32	-0.4
2,383,500	+		MPMX19_02265	0.42	+1.4
2,383,500	+		MPMX19_02265	0.42	+0.4
2,383,501	-		MPMX19_02265	0.42	+1.4
2,383,501	-		MPMX19_02265	0.42	+1.8
2,383,503	-		MPMX19_02265	0.42	-1.8
2,383,512	+		MPMX19_02265	0.43	-0.9
2,383,512	+		MPMX19_02265	0.43	+1.4
2,383,512	+		MPMX19_02265	0.43	+0.5
2,383,591	-		MPMX19_02265	0.51	-2.2
2,383,592	+		MPMX19_02265	0.51	+0.1
2,383,592	+		MPMX19_02265	0.51	+0.4
2,383,592	+		MPMX19_02265	0.51	+1.1
2,383,593	-		MPMX19_02265	0.51	+0.0
2,383,593	-		MPMX19_02265	0.51	+0.1
2,383,593	-		MPMX19_02265	0.51	-2.2
2,383,593	-		MPMX19_02265	0.51	+1.2
2,383,597	+		MPMX19_02265	0.52	+1.0
2,383,597	+		MPMX19_02265	0.52	-0.5
2,383,597	+		MPMX19_02265	0.52	+1.6
2,383,597	+		MPMX19_02265	0.52	+0.1
2,383,597	+		MPMX19_02265	0.52	+1.1
2,383,598	-		MPMX19_02265	0.52	-0.2
2,383,598	-		MPMX19_02265	0.52	-0.4
2,383,603	+		MPMX19_02265	0.52	+0.2
2,383,644	-		MPMX19_02265	0.57	+0.8
2,383,868	+		MPMX19_02265	0.80	+0.7
2,383,868	+		MPMX19_02265	0.80	-1.2
2,383,907	+		MPMX19_02265	0.84	-0.9
2,383,920	-		MPMX19_02265	0.86	+1.1
2,383,923	+		MPMX19_02265	0.86	-0.7
2,383,979	-				-0.7
2,384,031	+				-0.9
2,384,087	-				+0.7
2,384,087	-				-1.3
2,384,087	-				+0.6
2,384,110	+				+0.4
2,384,110	+				+0.4
2,384,110	+				-1.5
2,384,110	+				+0.9
2,384,110	+				-1.2
2,384,110	+				-1.7
2,384,110	+				+0.1
2,384,111	-				-0.4
2,384,111	-				+0.2
2,384,111	-				-0.6
2,384,111	-				+1.8
2,384,147	+				-0.7
2,384,147	+				-0.7
2,384,147	+				-0.6
2,384,147	+				-2.7
2,384,148	-				-1.4
2,384,148	-				+0.7
2,384,148	-				+0.4
2,384,148	-				-0.6
2,384,148	-				-1.2
2,384,172	+				-2.7
2,384,172	+				-0.2
2,384,172	+				-2.7
2,384,172	+				+0.1
2,384,172	+				-1.4
2,384,172	+				-0.5
2,384,172	+				-1.3
2,384,173	-				+0.4
2,384,173	-				-0.2
2,384,173	-				-0.2
2,384,173	-				-0.4
2,384,173	-				+1.7
2,384,204	+				+0.6
2,384,204	+				-1.3
2,384,204	+				-0.5
2,384,204	+				-2.5
2,384,204	+				-1.7
2,384,204	+				-1.5
2,384,204	+				-1.6
2,384,204	+				+1.2
2,384,204	+				-1.1
2,384,204	+				+0.9
2,384,204	+				-0.3
2,384,205	-				+1.4
2,384,205	-				-0.9
2,384,205	-				+0.8
2,384,205	-				-3.0
2,384,205	-				-1.4
2,384,205	-				-0.6
2,384,205	-				-0.1
2,384,205	-				-0.6
2,384,205	-				-1.7
2,384,205	-				-1.2
2,384,205	-				-0.6
2,384,205	-				-0.7
2,384,205	-				+0.4
2,384,205	-				+1.4
2,384,239	+				-1.5
2,384,239	+				+0.4
2,384,239	+				-0.6
2,384,239	+				-0.2
2,384,239	+				-0.7
2,384,240	-				-0.6
2,384,240	-				+0.8
2,384,240	-				-0.5
2,384,240	-				+1.4
2,384,240	-				-0.4
2,384,240	-				-0.6
2,384,240	-				+0.1
2,384,253	-				+0.7
2,384,284	+				-1.6
2,384,284	+				-2.0
2,384,284	+				-1.5
2,384,284	+				+0.0
2,384,284	+				+0.4
2,384,284	+				-1.7
2,384,284	+				+1.0
2,384,284	+				-0.7
2,384,284	+				-0.9
2,384,284	+				-0.4
2,384,284	+				-0.7
2,384,284	+				+1.8
2,384,284	+				-1.0
2,384,285	-				-0.6
2,384,285	-				-0.2
2,384,285	-				+1.4
2,384,285	-				-1.4
2,384,285	-				+0.1
2,384,285	-				-1.4
2,384,285	-				-0.4
2,384,285	-				-1.7
2,384,285	-				+1.0
2,384,285	-				-0.9
2,384,442	+		MPMX19_02266	0.59	-1.3
2,384,442	+		MPMX19_02266	0.59	-0.8
2,384,443	-		MPMX19_02266	0.59	-1.7
2,384,492	+		MPMX19_02266	0.78	+1.0
2,384,492	+		MPMX19_02266	0.78	-1.4
2,384,492	+		MPMX19_02266	0.78	-0.2
2,384,492	+		MPMX19_02266	0.78	+0.7
2,384,492	+		MPMX19_02266	0.78	-1.2
2,384,493	-		MPMX19_02266	0.79	+0.3
2,384,493	-		MPMX19_02266	0.79	-0.6
2,384,493	-		MPMX19_02266	0.79	-0.9
2,384,493	-		MPMX19_02266	0.79	-1.6
2,384,493	-		MPMX19_02266	0.79	-0.4
2,384,493	-		MPMX19_02266	0.79	-1.6
2,384,493	-		MPMX19_02266	0.79	+2.0
2,384,493	-		MPMX19_02266	0.79	-2.0
2,384,544	+				+0.1
2,384,544	+				-0.6
2,384,544	+				-1.5
2,384,544	+				+0.4
2,384,544	+				+0.4
2,384,544	+				-0.6
2,384,544	+				-1.2
2,384,544	+				-1.4
2,384,544	+				-0.0
2,384,544	+				-0.6
2,384,544	+				+1.8
2,384,545	-				-0.6
2,384,545	-				-0.6
2,384,545	-				-0.4
2,384,545	-				-0.2
2,384,545	-				-1.4
2,384,545	-				-1.4
2,384,545	-				-0.3
2,384,545	-				-0.6
2,384,545	-				-0.2
2,384,545	-				+0.4
2,384,589	+				-0.3
2,384,589	+				-0.2
2,384,589	+				+0.8
2,384,589	+				+1.4
2,384,589	+				+1.4
2,384,590	-				-1.6
2,384,590	-				-1.2
2,384,590	-				+0.4
2,384,590	-				+1.8
2,384,590	-				-0.9
2,384,603	+				+0.6
2,384,603	+				-1.4
2,384,603	+				-1.4
2,384,603	+				+0.4
2,384,603	+				+0.4
2,384,603	+				+0.8
2,384,603	+				+2.4
2,384,603	+				+0.4
2,384,603	+				-1.0
2,384,603	+				-0.9
2,384,603	+				-1.6
2,384,603	+				-0.2
2,384,604	-				-1.2
2,384,604	-				+0.7
2,384,604	-				-2.2
2,384,604	-				-2.0
2,384,604	-				+0.4
2,384,604	-				-1.6
2,384,604	-				+0.8
2,384,691	+				-1.4
2,384,691	+				+0.4
2,384,691	+				-1.6
2,384,691	+				-1.2
2,384,691	+				-0.9
2,384,691	+				-1.7
2,384,691	+				+0.4
2,384,691	+				+0.2
2,384,691	+				-0.6
2,384,691	+				-0.9
2,384,691	+				-1.2
2,384,691	+				-1.2
2,384,691	+				+1.0
2,384,692	-				+0.7
2,384,692	-				-0.2
2,384,692	-				-2.2
2,384,692	-				+0.4
2,384,692	-				+0.6
2,384,692	-				-0.9
2,384,692	-				+0.8
2,384,710	+				+0.4
2,384,710	+				+0.0
2,384,710	+				-0.6
2,384,710	+				+0.4
2,384,710	+				-0.7
2,384,710	+				+1.4
2,384,710	+				-0.2
2,384,710	+				-0.2
2,384,710	+				+0.2
2,384,710	+				-0.9
2,384,710	+				-0.2
2,384,710	+				-1.0
2,384,710	+				+1.4
2,384,710	+				-1.5
2,384,710	+				-2.8
2,384,710	+				-1.4
2,384,710	+				-0.6
2,384,710	+				-1.2
2,384,710	+				-0.2
2,384,710	+				-0.9
2,384,710	+				-0.9
2,384,710	+				+0.4
2,384,710	+				+0.3
2,384,710	+				-0.4
2,384,710	+				+2.0
2,384,711	-				+0.1
2,384,711	-				-1.2
2,384,711	-				+0.8
2,384,711	-				+0.0
2,384,711	-				-0.9
2,384,711	-				-0.6
2,384,711	-				-0.4
2,384,711	-				+0.4
2,384,711	-				+0.4
2,384,711	-				-0.6
2,384,711	-				-1.9
2,384,711	-				-1.5
2,384,711	-				-2.0
2,384,711	-				-0.2
2,384,711	-				-0.2
2,384,711	-				-1.4
2,384,711	-				+0.4
2,384,711	-				-1.5
2,384,711	-				-0.2
2,384,711	-				+0.1
2,384,711	-				+1.4
2,384,719	+				-1.0
2,384,719	+				-1.6
2,384,719	+				-0.5
2,384,720	-				-1.6
2,384,720	-				-0.4
2,384,804	-				+0.2
2,384,804	-				-0.2
2,384,804	-				-0.4
2,384,881	+				+0.4
2,384,881	+				-0.2
2,384,881	+				-0.9
2,384,882	-				-1.4
2,385,001	+				-0.6
2,385,001	+				-0.0
2,385,001	+				-0.9
2,385,001	+				-0.1
2,385,001	+				-1.4
2,385,002	-				-1.7
2,385,002	-				-0.6
2,385,002	-				+0.6
2,385,002	-				-0.2
2,385,002	-				+0.4
2,385,002	-				-2.0
2,385,002	-				-0.6
2,385,011	+				-1.4
2,385,011	+				+0.4
2,385,011	+				-2.8
2,385,011	+				-0.9
2,385,011	+				-0.6
2,385,012	-				-0.8
2,385,012	-				-0.2
2,385,012	-				-2.2
2,385,012	-				-0.2
2,385,012	-				+1.4
2,385,012	-				-3.0
2,385,037	-				-2.2
2,385,037	-				-1.2
2,385,037	-				-1.1