Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02240

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,357,217	+		MPMX19_02239	0.38	-1.1
2,357,217	+		MPMX19_02239	0.38	+0.1
2,357,217	+		MPMX19_02239	0.38	-0.5
2,357,217	+		MPMX19_02239	0.38	-1.4
2,357,217	+		MPMX19_02239	0.38	-0.2
2,357,217	+		MPMX19_02239	0.38	-0.9
2,357,217	+		MPMX19_02239	0.38	+0.6
2,357,217	+		MPMX19_02239	0.38	+0.5
2,357,217	+		MPMX19_02239	0.38	-0.5
2,357,217	+		MPMX19_02239	0.38	-0.9
2,357,217	+		MPMX19_02239	0.38	-0.5
2,357,217	+		MPMX19_02239	0.38	-0.9
2,357,217	+		MPMX19_02239	0.38	-0.7
2,357,217	+		MPMX19_02239	0.38	+0.7
2,357,217	+		MPMX19_02239	0.38	-1.4
2,357,217	+		MPMX19_02239	0.38	+0.5
2,357,217	+		MPMX19_02239	0.38	-0.7
2,357,217	+		MPMX19_02239	0.38	-1.2
2,357,217	+		MPMX19_02239	0.38	-0.6
2,357,217	+		MPMX19_02239	0.38	-0.1
2,357,217	+		MPMX19_02239	0.38	-0.5
2,357,217	+		MPMX19_02239	0.38	-0.1
2,357,217	+		MPMX19_02239	0.38	-0.5
2,357,217	+		MPMX19_02239	0.38	+1.5
2,357,217	+		MPMX19_02239	0.38	-0.9
2,357,218	-		MPMX19_02239	0.38	+1.1
2,357,218	-		MPMX19_02239	0.38	+0.2
2,357,218	-		MPMX19_02239	0.38	+1.5
2,357,218	-		MPMX19_02239	0.38	-1.1
2,357,218	-		MPMX19_02239	0.38	+0.2
2,357,218	-		MPMX19_02239	0.38	-1.9
2,357,218	-		MPMX19_02239	0.38	-0.1
2,357,218	-		MPMX19_02239	0.38	-2.0
2,357,218	-		MPMX19_02239	0.38	-1.1
2,357,218	-		MPMX19_02239	0.38	-0.5
2,357,218	-		MPMX19_02239	0.38	+1.0
2,357,218	-		MPMX19_02239	0.38	-0.3
2,357,218	-		MPMX19_02239	0.38	+0.9
2,357,218	-		MPMX19_02239	0.38	-0.7
2,357,218	-		MPMX19_02239	0.38	-2.1
2,357,218	-		MPMX19_02239	0.38	-1.5
2,357,218	-		MPMX19_02239	0.38	-1.9
2,357,218	-		MPMX19_02239	0.38	-0.9
2,357,218	-		MPMX19_02239	0.38	+0.5
2,357,218	-		MPMX19_02239	0.38	-1.5
2,357,218	-		MPMX19_02239	0.38	+0.0
2,357,218	-		MPMX19_02239	0.38	-0.1
2,357,218	-		MPMX19_02239	0.38	-0.2
2,357,218	-		MPMX19_02239	0.38	-2.5
2,357,218	-		MPMX19_02239	0.38	+0.5
2,357,225	+		MPMX19_02239	0.39	+0.1
2,357,225	+		MPMX19_02239	0.39	-0.5
2,357,225	+		MPMX19_02239	0.39	-0.1
2,357,225	+		MPMX19_02239	0.39	-0.4
2,357,225	+		MPMX19_02239	0.39	+0.5
2,357,225	+		MPMX19_02239	0.39	+1.5
2,357,226	-		MPMX19_02239	0.39	-0.1
2,357,226	-		MPMX19_02239	0.39	-0.4
2,357,226	-		MPMX19_02239	0.39	-1.2
2,357,226	-		MPMX19_02239	0.39	-1.1
2,357,276	+		MPMX19_02239	0.42	-0.1
2,357,276	+		MPMX19_02239	0.42	+0.1
2,357,276	+		MPMX19_02239	0.42	-0.7
2,357,276	+		MPMX19_02239	0.42	-0.4
2,357,276	+		MPMX19_02239	0.42	-0.4
2,357,276	+		MPMX19_02239	0.42	-0.9
2,357,276	+		MPMX19_02239	0.42	-0.4
2,357,277	-		MPMX19_02239	0.42	+0.2
2,357,277	-		MPMX19_02239	0.42	-0.5
2,357,277	-		MPMX19_02239	0.42	-0.5
2,357,277	-		MPMX19_02239	0.42	-1.1
2,357,277	-		MPMX19_02239	0.42	-1.9
2,357,277	-		MPMX19_02239	0.42	-0.9
2,357,277	-		MPMX19_02239	0.42	-0.5
2,357,277	-		MPMX19_02239	0.42	-1.5
2,357,277	-		MPMX19_02239	0.42	-0.4
2,357,321	+		MPMX19_02239	0.45	-1.5
2,357,322	-		MPMX19_02239	0.45	+0.5
2,357,322	-		MPMX19_02239	0.45	-0.1
2,357,379	+		MPMX19_02239	0.49	+0.7
2,357,379	+		MPMX19_02239	0.49	-0.9
2,357,379	+		MPMX19_02239	0.49	-0.4
2,357,379	+		MPMX19_02239	0.49	+1.2
2,357,379	+		MPMX19_02239	0.49	-0.7
2,357,379	+		MPMX19_02239	0.49	-1.7
2,357,380	-		MPMX19_02239	0.50	+1.0
2,357,380	-		MPMX19_02239	0.50	-1.1
2,357,380	-		MPMX19_02239	0.50	-1.2
2,357,501	+		MPMX19_02239	0.58	-2.4
2,357,502	-		MPMX19_02239	0.58	+0.9
2,357,556	-		MPMX19_02239	0.62	+0.2
2,357,624	+		MPMX19_02239	0.67	-0.3
2,357,624	+		MPMX19_02239	0.67	-0.1
2,357,624	+		MPMX19_02239	0.67	-0.9
2,357,624	+		MPMX19_02239	0.67	-1.0
2,357,624	+		MPMX19_02239	0.67	-0.5
2,357,624	+		MPMX19_02239	0.67	-0.1
2,357,624	+		MPMX19_02239	0.67	-0.9
2,357,624	+		MPMX19_02239	0.67	-0.5
2,357,624	+		MPMX19_02239	0.67	-1.1
2,357,624	+		MPMX19_02239	0.67	-1.5
2,357,624	+		MPMX19_02239	0.67	+0.5
2,357,624	+		MPMX19_02239	0.67	+0.1
2,357,624	+		MPMX19_02239	0.67	-0.0
2,357,624	+		MPMX19_02239	0.67	+0.6
2,357,624	+		MPMX19_02239	0.67	-0.5
2,357,624	+		MPMX19_02239	0.67	-1.4
2,357,624	+		MPMX19_02239	0.67	-0.3
2,357,624	+		MPMX19_02239	0.67	-1.1
2,357,624	+		MPMX19_02239	0.67	-1.4
2,357,624	+		MPMX19_02239	0.67	-0.4
2,357,625	-		MPMX19_02239	0.67	+0.6
2,357,625	-		MPMX19_02239	0.67	-1.5
2,357,625	-		MPMX19_02239	0.67	-1.4
2,357,625	-		MPMX19_02239	0.67	-1.2
2,357,625	-		MPMX19_02239	0.67	-1.5
2,357,625	-		MPMX19_02239	0.67	+0.7
2,357,625	-		MPMX19_02239	0.67	-0.7
2,357,625	-		MPMX19_02239	0.67	-0.5
2,357,625	-		MPMX19_02239	0.67	-0.9
2,357,625	-		MPMX19_02239	0.67	-0.4
2,357,625	-		MPMX19_02239	0.67	-1.1
2,357,625	-		MPMX19_02239	0.67	-0.9
2,357,625	-		MPMX19_02239	0.67	-0.3
2,357,625	-		MPMX19_02239	0.67	-0.5
2,357,625	-		MPMX19_02239	0.67	+0.5
2,357,625	-		MPMX19_02239	0.67	+0.9
2,357,708	+		MPMX19_02239	0.73	-2.8
2,357,708	+		MPMX19_02239	0.73	-1.4
2,357,816	+		MPMX19_02239	0.80	-0.5
2,357,816	+		MPMX19_02239	0.80	+0.5
2,357,816	+		MPMX19_02239	0.80	+1.1
2,357,816	+		MPMX19_02239	0.80	+1.9
2,357,816	+		MPMX19_02239	0.80	-0.9
2,357,816	+		MPMX19_02239	0.80	+0.2
2,357,816	+		MPMX19_02239	0.80	-1.2
2,357,816	+		MPMX19_02239	0.80	-1.5
2,357,816	+		MPMX19_02239	0.80	-0.0
2,357,816	+		MPMX19_02239	0.80	-1.0
2,357,816	+		MPMX19_02239	0.80	-0.5
2,357,816	+		MPMX19_02239	0.80	-0.8
2,357,816	+		MPMX19_02239	0.80	-0.5
2,357,817	-		MPMX19_02239	0.80	+0.5
2,357,817	-		MPMX19_02239	0.80	-1.1
2,357,817	-		MPMX19_02239	0.80	+0.2
2,357,817	-		MPMX19_02239	0.80	+0.5
2,357,817	-		MPMX19_02239	0.80	-1.1
2,357,817	-		MPMX19_02239	0.80	-1.1
2,357,817	-		MPMX19_02239	0.80	-0.7
2,357,817	-		MPMX19_02239	0.80	-0.9
2,357,817	-		MPMX19_02239	0.80	-0.1
2,357,817	-		MPMX19_02239	0.80	-0.5
2,357,817	-		MPMX19_02239	0.80	-0.1
2,357,817	-		MPMX19_02239	0.80	-0.4
2,357,817	-		MPMX19_02239	0.80	+0.1
2,357,817	-		MPMX19_02239	0.80	-0.5
2,358,044	+				+1.0
2,358,044	+				+1.0
2,358,044	+				+0.5
2,358,044	+				+1.8
2,358,044	+				-1.1
2,358,044	+				-1.1
2,358,044	+				+1.5
2,358,044	+				+0.1
2,358,044	+				+0.5
2,358,044	+				-2.5
2,358,044	+				-0.1
2,358,044	+				-1.4
2,358,044	+				-0.1
2,358,044	+				-1.5
2,358,044	+				-0.4
2,358,044	+				+0.5
2,358,044	+				-1.1
2,358,044	+				-1.0
2,358,044	+				-0.5
2,358,044	+				-1.4
2,358,044	+				-2.3
2,358,044	+				+0.1
2,358,044	+				-0.5
2,358,044	+				+0.5
2,358,044	+				-2.9
2,358,044	+				-0.1
2,358,045	-				+0.7
2,358,045	-				-2.0
2,358,045	-				+0.0
2,358,045	-				+0.3
2,358,045	-				-0.7
2,358,045	-				+0.5
2,358,045	-				+1.5
2,358,045	-				-0.4
2,358,045	-				-0.1
2,358,045	-				-2.0
2,358,045	-				-0.5
2,358,045	-				+0.5
2,358,045	-				+1.3
2,358,045	-				+0.6
2,358,045	-				+0.6
2,358,045	-				-1.4
2,358,045	-				-0.1
2,358,048	+				-1.7
2,358,048	+				-2.1
2,358,048	+				+0.5
2,358,048	+				+0.1
2,358,048	+				+1.5
2,358,048	+				+0.5
2,358,048	+				-1.5
2,358,048	+				-0.1
2,358,048	+				-1.5
2,358,048	+				+0.1
2,358,048	+				-0.5
2,358,048	+				-1.4
2,358,048	+				-0.1
2,358,048	+				-1.5
2,358,048	+				-1.7
2,358,049	-				-1.4
2,358,049	-				+0.0
2,358,049	-				-0.1
2,358,049	-				-1.4
2,358,049	-				-0.4
2,358,049	-				+0.9
2,358,049	-				+1.0
2,358,049	-				-1.7
2,358,049	-				-0.1
2,358,049	-				-1.8
2,358,049	-				-0.9
2,358,049	-				+0.5
2,358,049	-				+0.9
2,358,049	-				-0.4
2,358,049	-				-1.1
2,358,049	-				-1.3
2,358,071	+				-0.1
2,358,072	-				+0.5
2,358,252	+		MPMX19_02240	0.12	+0.5
2,358,252	+		MPMX19_02240	0.12	-1.1
2,358,252	+		MPMX19_02240	0.12	-0.3
2,358,252	+		MPMX19_02240	0.12	+0.5
2,358,252	+		MPMX19_02240	0.12	-0.1
2,358,253	-		MPMX19_02240	0.12	-0.9
2,358,289	+		MPMX19_02240	0.16	-0.5
2,358,290	-		MPMX19_02240	0.16	+0.1
2,358,290	-		MPMX19_02240	0.16	+0.0
2,358,290	-		MPMX19_02240	0.16	+0.9
2,358,290	-		MPMX19_02240	0.16	+0.1
2,358,290	-		MPMX19_02240	0.16	+1.0
2,358,290	-		MPMX19_02240	0.16	+0.9
2,358,290	-		MPMX19_02240	0.16	+0.8
2,358,319	+		MPMX19_02240	0.18	+0.5
2,358,319	+		MPMX19_02240	0.18	+1.5
2,358,319	+		MPMX19_02240	0.18	+0.9
2,358,319	+		MPMX19_02240	0.18	-0.4
2,358,319	+		MPMX19_02240	0.18	-0.5
2,358,319	+		MPMX19_02240	0.18	-0.1
2,358,320	-		MPMX19_02240	0.19	-1.1
2,358,320	-		MPMX19_02240	0.19	-1.4
2,358,320	-		MPMX19_02240	0.19	+0.9
2,358,320	-		MPMX19_02240	0.19	-0.4
2,358,320	-		MPMX19_02240	0.19	-1.1
2,358,320	-		MPMX19_02240	0.19	-0.7
2,358,351	+		MPMX19_02240	0.22	+1.0
2,358,352	-		MPMX19_02240	0.22	-1.1
2,358,352	-		MPMX19_02240	0.22	-0.7
2,358,796	+		MPMX19_02240	0.65	+0.9
2,358,796	+		MPMX19_02240	0.65	-0.9
2,358,797	-		MPMX19_02240	0.65	-1.5
2,358,797	-		MPMX19_02240	0.65	+0.6
2,358,893	+		MPMX19_02240	0.75	-0.4
2,358,893	+		MPMX19_02240	0.75	-0.5
2,358,893	+		MPMX19_02240	0.75	-0.5
2,358,893	+		MPMX19_02240	0.75	-0.9
2,358,893	+		MPMX19_02240	0.75	-0.9
2,358,893	+		MPMX19_02240	0.75	-1.3
2,358,893	+		MPMX19_02240	0.75	-0.7
2,358,893	+		MPMX19_02240	0.75	-0.5
2,358,893	+		MPMX19_02240	0.75	-0.9
2,358,893	+		MPMX19_02240	0.75	-0.1
2,358,893	+		MPMX19_02240	0.75	-0.1
2,358,893	+		MPMX19_02240	0.75	-0.4
2,358,893	+		MPMX19_02240	0.75	+0.1
2,358,893	+		MPMX19_02240	0.75	-0.7
2,358,893	+		MPMX19_02240	0.75	-0.1
2,358,893	+		MPMX19_02240	0.75	+0.1
2,358,894	-		MPMX19_02240	0.75	+1.5
2,358,894	-		MPMX19_02240	0.75	+0.5
2,358,894	-		MPMX19_02240	0.75	-2.1
2,358,894	-		MPMX19_02240	0.75	-0.7
2,358,894	-		MPMX19_02240	0.75	+0.1
2,358,894	-		MPMX19_02240	0.75	-1.9
2,358,894	-		MPMX19_02240	0.75	-1.4
2,358,894	-		MPMX19_02240	0.75	+0.2
2,358,894	-		MPMX19_02240	0.75	+0.5
2,358,894	-		MPMX19_02240	0.75	-1.3
2,358,894	-		MPMX19_02240	0.75	-0.9
2,358,894	-		MPMX19_02240	0.75	-0.3
2,358,894	-		MPMX19_02240	0.75	-1.4
2,358,894	-		MPMX19_02240	0.75	-0.4
2,358,894	-		MPMX19_02240	0.75	+1.8
2,358,894	-		MPMX19_02240	0.75	-0.3
2,358,894	-		MPMX19_02240	0.75	+0.5
2,358,894	-		MPMX19_02240	0.75	+1.1
2,358,894	-		MPMX19_02240	0.75	-0.5
2,358,894	-		MPMX19_02240	0.75	-1.0
2,358,894	-		MPMX19_02240	0.75	-0.5
2,358,894	-		MPMX19_02240	0.75	-1.7
2,358,894	-		MPMX19_02240	0.75	-3.1
2,358,894	-		MPMX19_02240	0.75	-0.2
2,358,976	+		MPMX19_02240	0.83	-0.9
2,358,976	+		MPMX19_02240	0.83	-0.5
2,358,976	+		MPMX19_02240	0.83	-1.1
2,358,976	+		MPMX19_02240	0.83	+1.5
2,358,976	+		MPMX19_02240	0.83	+0.5
2,358,976	+		MPMX19_02240	0.83	-0.5
2,358,976	+		MPMX19_02240	0.83	-1.1
2,358,976	+		MPMX19_02240	0.83	+0.6
2,358,976	+		MPMX19_02240	0.83	-0.3
2,358,976	+		MPMX19_02240	0.83	+0.5
2,358,976	+		MPMX19_02240	0.83	+0.1
2,358,976	+		MPMX19_02240	0.83	+0.2
2,358,976	+		MPMX19_02240	0.83	+1.1
2,358,976	+		MPMX19_02240	0.83	-0.1
2,358,976	+		MPMX19_02240	0.83	+0.5
2,358,976	+		MPMX19_02240	0.83	-0.4
2,358,976	+		MPMX19_02240	0.83	-0.1
2,358,976	+		MPMX19_02240	0.83	-1.1
2,358,976	+		MPMX19_02240	0.83	+0.7
2,358,977	-		MPMX19_02240	0.83	+0.3
2,358,977	-		MPMX19_02240	0.83	+0.0
2,358,977	-		MPMX19_02240	0.83	-0.1
2,358,977	-		MPMX19_02240	0.83	+0.3
2,358,977	-		MPMX19_02240	0.83	+0.9
2,358,977	-		MPMX19_02240	0.83	-1.1
2,358,977	-		MPMX19_02240	0.83	-0.3
2,358,977	-		MPMX19_02240	0.83	+0.1
2,358,977	-		MPMX19_02240	0.83	-1.4
2,358,977	-		MPMX19_02240	0.83	-0.4
2,358,977	-		MPMX19_02240	0.83	-0.2
2,358,977	-		MPMX19_02240	0.83	+1.5
2,358,977	-		MPMX19_02240	0.83	-0.9
2,358,977	-		MPMX19_02240	0.83	+0.9
2,359,090	+				-0.6
2,359,090	+				-0.4
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2,360,152	-		MPMX19_02242	0.14	+0.3
2,360,152	-		MPMX19_02242	0.14	-1.1
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2,360,152	-		MPMX19_02242	0.14	-0.4
2,360,152	-		MPMX19_02242	0.14	-1.7