Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02154

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
2,250,169	+				-0.8
2,250,170	-				-1.1
2,250,197	-				-2.0
2,250,202	+				-0.5
2,250,202	+				+1.1
2,250,202	+				-0.8
2,250,202	+				-0.5
2,250,203	-				-0.2
2,250,203	-				+0.1
2,250,203	-				+0.5
2,250,203	-				-1.5
2,250,235	+				+1.5
2,250,235	+				-1.1
2,250,235	+				-0.5
2,250,235	+				-2.3
2,250,235	+				+0.9
2,250,235	+				-0.8
2,250,235	+				-1.1
2,250,235	+				-1.3
2,250,235	+				-0.1
2,250,236	-				-2.0
2,250,236	-				+0.5
2,250,236	-				-0.1
2,250,236	-				+0.0
2,250,236	-				+1.0
2,250,236	-				+2.1
2,250,236	-				+0.5
2,250,236	-				-0.8
2,250,236	-				-1.7
2,250,236	-				-2.2
2,250,236	-				-0.7
2,250,236	-				+0.3
2,250,236	-				-1.1
2,250,236	-				+0.5
2,250,236	-				-1.4
2,250,236	-				-1.2
2,250,236	-				-0.8
2,250,300	+				-1.1
2,250,300	+				+0.5
2,250,301	-				+1.0
2,250,301	-				-1.0
2,250,301	-				-1.5
2,250,478	+		MPMX19_02153	0.24	-0.4
2,250,478	+		MPMX19_02153	0.24	-0.4
2,250,478	+		MPMX19_02153	0.24	-0.5
2,250,479	-		MPMX19_02153	0.24	-0.9
2,250,479	-		MPMX19_02153	0.24	+1.0
2,250,479	-		MPMX19_02153	0.24	+0.5
2,250,479	-		MPMX19_02153	0.24	-0.3
2,250,479	-		MPMX19_02153	0.24	-0.1
2,250,494	-		MPMX19_02153	0.26	-0.2
2,250,787	+		MPMX19_02153	0.60	-0.3
2,250,787	+		MPMX19_02153	0.60	+0.9
2,250,788	-		MPMX19_02153	0.60	-0.9
2,250,788	-		MPMX19_02153	0.60	-1.1
2,251,335	-		MPMX19_02154	0.19	-0.5
2,251,335	-		MPMX19_02154	0.19	-1.7
2,251,394	+		MPMX19_02154	0.25	+0.4
2,251,394	+		MPMX19_02154	0.25	+0.1
2,251,394	+		MPMX19_02154	0.25	-0.5
2,251,394	+		MPMX19_02154	0.25	+0.9
2,251,394	+		MPMX19_02154	0.25	-0.5
2,251,394	+		MPMX19_02154	0.25	+0.3
2,251,394	+		MPMX19_02154	0.25	-1.1
2,251,394	+		MPMX19_02154	0.25	-1.3
2,251,394	+		MPMX19_02154	0.25	-0.8
2,251,395	-		MPMX19_02154	0.26	+0.2
2,251,395	-		MPMX19_02154	0.26	-1.7
2,251,395	-		MPMX19_02154	0.26	+0.5
2,251,395	-		MPMX19_02154	0.26	-1.1
2,251,395	-		MPMX19_02154	0.26	+0.2
2,251,395	-		MPMX19_02154	0.26	-0.5
2,251,395	-		MPMX19_02154	0.26	-0.2
2,251,395	-		MPMX19_02154	0.26	-1.2
2,251,395	-		MPMX19_02154	0.26	+0.5
2,251,400	+		MPMX19_02154	0.26	-0.5
2,251,400	+		MPMX19_02154	0.26	-1.7
2,251,400	+		MPMX19_02154	0.26	-1.6
2,251,400	+		MPMX19_02154	0.26	+1.5
2,251,400	+		MPMX19_02154	0.26	-0.5
2,251,400	+		MPMX19_02154	0.26	-0.5
2,251,400	+		MPMX19_02154	0.26	+1.2
2,251,400	+		MPMX19_02154	0.26	-1.5
2,251,400	+		MPMX19_02154	0.26	-0.1
2,251,400	+		MPMX19_02154	0.26	+1.3
2,251,400	+		MPMX19_02154	0.26	+2.3
2,251,401	-		MPMX19_02154	0.26	-0.8
2,251,401	-		MPMX19_02154	0.26	-0.1
2,251,401	-		MPMX19_02154	0.26	+0.8
2,251,401	-		MPMX19_02154	0.26	-0.5
2,251,401	-		MPMX19_02154	0.26	-0.9
2,251,401	-		MPMX19_02154	0.26	+0.2
2,251,401	-		MPMX19_02154	0.26	+0.8
2,251,401	-		MPMX19_02154	0.26	-0.5
2,251,401	-		MPMX19_02154	0.26	-0.8
2,251,409	+		MPMX19_02154	0.27	+0.5
2,251,409	+		MPMX19_02154	0.27	-0.5
2,251,409	+		MPMX19_02154	0.27	-0.1
2,251,409	+		MPMX19_02154	0.27	-0.5
2,251,409	+		MPMX19_02154	0.27	-0.7
2,251,409	+		MPMX19_02154	0.27	-0.1
2,251,409	+		MPMX19_02154	0.27	+0.9
2,251,409	+		MPMX19_02154	0.27	-2.1
2,251,410	-		MPMX19_02154	0.27	-1.3
2,251,410	-		MPMX19_02154	0.27	+0.1
2,251,410	-		MPMX19_02154	0.27	-0.9
2,251,410	-		MPMX19_02154	0.27	-0.8
2,251,410	-		MPMX19_02154	0.27	-1.8
2,251,410	-		MPMX19_02154	0.27	-1.7
2,251,410	-		MPMX19_02154	0.27	-0.6
2,251,410	-		MPMX19_02154	0.27	-0.7
2,251,410	-		MPMX19_02154	0.27	-0.8
2,251,410	-		MPMX19_02154	0.27	+0.3
2,251,410	-		MPMX19_02154	0.27	+0.2
2,251,410	-		MPMX19_02154	0.27	-1.1
2,251,410	-		MPMX19_02154	0.27	-1.5
2,251,472	+		MPMX19_02154	0.34	-1.7
2,251,472	+		MPMX19_02154	0.34	-0.3
2,251,472	+		MPMX19_02154	0.34	-1.1
2,251,472	+		MPMX19_02154	0.34	-0.1
2,251,472	+		MPMX19_02154	0.34	-1.5
2,251,472	+		MPMX19_02154	0.34	-0.2
2,251,472	+		MPMX19_02154	0.34	+0.2
2,251,472	+		MPMX19_02154	0.34	-0.5
2,251,472	+		MPMX19_02154	0.34	-1.5
2,251,472	+		MPMX19_02154	0.34	-0.1
2,251,472	+		MPMX19_02154	0.34	+1.1
2,251,472	+		MPMX19_02154	0.34	-0.5
2,251,472	+		MPMX19_02154	0.34	-0.8
2,251,472	+		MPMX19_02154	0.34	-0.5
2,251,473	-		MPMX19_02154	0.34	+0.3
2,251,473	-		MPMX19_02154	0.34	-0.8
2,251,473	-		MPMX19_02154	0.34	-0.8
2,251,473	-		MPMX19_02154	0.34	+0.2
2,251,473	-		MPMX19_02154	0.34	-0.8
2,251,473	-		MPMX19_02154	0.34	-1.3
2,251,473	-		MPMX19_02154	0.34	-0.3
2,251,473	-		MPMX19_02154	0.34	-1.7
2,251,473	-		MPMX19_02154	0.34	-1.0
2,251,473	-		MPMX19_02154	0.34	-0.6
2,251,473	-		MPMX19_02154	0.34	-0.1
2,251,473	-		MPMX19_02154	0.34	-0.5
2,251,473	-		MPMX19_02154	0.34	-2.1
2,251,473	-		MPMX19_02154	0.34	+0.5
2,251,473	-		MPMX19_02154	0.34	-0.5
2,251,473	-		MPMX19_02154	0.34	-0.5
2,251,473	-		MPMX19_02154	0.34	-0.8
2,251,473	-		MPMX19_02154	0.34	+0.1
2,251,473	-		MPMX19_02154	0.34	-1.7
2,251,473	-		MPMX19_02154	0.34	-0.5
2,251,473	-		MPMX19_02154	0.34	-0.8
2,251,473	-		MPMX19_02154	0.34	-1.4
2,251,473	-		MPMX19_02154	0.34	+1.9
2,251,473	-		MPMX19_02154	0.34	-1.3
2,251,473	-		MPMX19_02154	0.34	+0.2
2,251,473	-		MPMX19_02154	0.34	+0.1
2,251,934	+		MPMX19_02154	0.86	-0.7
2,251,934	+		MPMX19_02154	0.86	-1.8
2,251,935	-		MPMX19_02154	0.86	+0.8
2,251,943	+		MPMX19_02154	0.87	+1.1
2,251,943	+		MPMX19_02154	0.87	+0.5
2,251,943	+		MPMX19_02154	0.87	-0.8
2,251,943	+		MPMX19_02154	0.87	+1.1
2,251,943	+		MPMX19_02154	0.87	+0.2
2,251,943	+		MPMX19_02154	0.87	-0.5
2,251,943	+		MPMX19_02154	0.87	+0.9
2,251,943	+		MPMX19_02154	0.87	-2.3
2,251,943	+		MPMX19_02154	0.87	-1.1
2,251,943	+		MPMX19_02154	0.87	+0.3
2,251,943	+		MPMX19_02154	0.87	+0.1
2,251,943	+		MPMX19_02154	0.87	-0.5
2,251,943	+		MPMX19_02154	0.87	-0.3
2,251,943	+		MPMX19_02154	0.87	-0.2
2,251,943	+		MPMX19_02154	0.87	-0.1
2,251,943	+		MPMX19_02154	0.87	-1.3
2,251,943	+		MPMX19_02154	0.87	-0.6
2,251,943	+		MPMX19_02154	0.87	-1.1
2,251,943	+		MPMX19_02154	0.87	-0.0
2,251,943	+		MPMX19_02154	0.87	+0.5
2,251,943	+		MPMX19_02154	0.87	-1.1
2,251,943	+		MPMX19_02154	0.87	-0.8
2,251,943	+		MPMX19_02154	0.87	+1.1
2,251,944	-		MPMX19_02154	0.87	-0.7
2,251,944	-		MPMX19_02154	0.87	+0.9
2,251,944	-		MPMX19_02154	0.87	-0.5
2,251,944	-		MPMX19_02154	0.87	+0.9
2,251,944	-		MPMX19_02154	0.87	+0.5
2,251,944	-		MPMX19_02154	0.87	+0.5
2,251,944	-		MPMX19_02154	0.87	+0.9
2,251,944	-		MPMX19_02154	0.87	+0.2
2,251,944	-		MPMX19_02154	0.87	+0.9
2,251,944	-		MPMX19_02154	0.87	-1.5
2,251,944	-		MPMX19_02154	0.87	-1.5
2,251,944	-		MPMX19_02154	0.87	-0.1
2,251,944	-		MPMX19_02154	0.87	+0.8
2,251,944	-		MPMX19_02154	0.87	-0.9
2,251,944	-		MPMX19_02154	0.87	-0.6
2,251,944	-		MPMX19_02154	0.87	+0.0
2,251,944	-		MPMX19_02154	0.87	-0.5
2,251,944	-		MPMX19_02154	0.87	+0.5
2,251,946	+		MPMX19_02154	0.88	+0.2
2,251,946	+		MPMX19_02154	0.88	-1.1
2,251,946	+		MPMX19_02154	0.88	-0.2
2,251,947	-		MPMX19_02154	0.88	+0.2
2,251,947	-		MPMX19_02154	0.88	+0.2
2,251,947	-		MPMX19_02154	0.88	-0.5
2,251,947	-		MPMX19_02154	0.88	-2.1
2,251,947	-		MPMX19_02154	0.88	-0.1
2,251,947	-		MPMX19_02154	0.88	+0.5
2,251,985	+				+0.5
2,251,985	+				+0.9
2,251,985	+				+0.5
2,251,985	+				+0.5
2,251,985	+				-0.1
2,251,986	-				-0.4
2,251,986	-				-2.0
2,251,986	-				-0.3
2,251,986	-				-1.8
2,251,986	-				-0.0
2,252,090	-				+0.5
2,252,090	-				-1.3
2,252,275	+				-1.1
2,252,275	+				-0.2
2,252,275	+				+1.1
2,252,275	+				-1.1
2,252,276	-				+1.5
2,252,419	+		MPMX19_02155	0.15	-1.5
2,252,419	+		MPMX19_02155	0.15	+0.8
2,252,419	+		MPMX19_02155	0.15	-1.1
2,252,420	-		MPMX19_02155	0.15	-0.5
2,252,420	-		MPMX19_02155	0.15	-0.6
2,252,420	-		MPMX19_02155	0.15	+2.5
2,252,420	-		MPMX19_02155	0.15	-0.5
2,252,431	+		MPMX19_02155	0.16	+0.3
2,252,431	+		MPMX19_02155	0.16	-1.7
2,252,431	+		MPMX19_02155	0.16	+0.3
2,252,431	+		MPMX19_02155	0.16	-1.1
2,252,431	+		MPMX19_02155	0.16	-1.7
2,252,431	+		MPMX19_02155	0.16	-0.3
2,252,431	+		MPMX19_02155	0.16	-0.8
2,252,432	-		MPMX19_02155	0.16	-1.5
2,252,432	-		MPMX19_02155	0.16	+1.5
2,252,500	+		MPMX19_02155	0.20	+0.2
2,252,500	+		MPMX19_02155	0.20	+0.5
2,252,500	+		MPMX19_02155	0.20	+1.5
2,252,500	+		MPMX19_02155	0.20	+0.9
2,252,500	+		MPMX19_02155	0.20	-0.2
2,252,500	+		MPMX19_02155	0.20	+1.5
2,252,500	+		MPMX19_02155	0.20	-1.1
2,252,500	+		MPMX19_02155	0.20	-1.8
2,252,501	-		MPMX19_02155	0.20	-0.1
2,252,501	-		MPMX19_02155	0.20	-1.0
2,252,501	-		MPMX19_02155	0.20	-0.7
2,252,501	-		MPMX19_02155	0.20	-0.1
2,252,501	-		MPMX19_02155	0.20	-1.7
2,252,501	-		MPMX19_02155	0.20	+1.1
2,252,501	-		MPMX19_02155	0.20	-0.1
2,252,501	-		MPMX19_02155	0.20	+0.4
2,252,501	-		MPMX19_02155	0.20	-1.1
2,252,501	-		MPMX19_02155	0.20	+0.2
2,252,501	-		MPMX19_02155	0.20	-1.7
2,252,501	-		MPMX19_02155	0.20	-2.1
2,252,501	-		MPMX19_02155	0.20	-0.5
2,252,566	+		MPMX19_02155	0.25	+1.5
2,252,566	+		MPMX19_02155	0.25	-0.8
2,252,566	+		MPMX19_02155	0.25	+0.5
2,252,566	+		MPMX19_02155	0.25	-0.5
2,252,566	+		MPMX19_02155	0.25	+0.2
2,252,566	+		MPMX19_02155	0.25	-0.5
2,252,566	+		MPMX19_02155	0.25	-0.3
2,252,566	+		MPMX19_02155	0.25	-1.3
2,252,566	+		MPMX19_02155	0.25	-0.1
2,252,566	+		MPMX19_02155	0.25	+0.8
2,252,566	+		MPMX19_02155	0.25	-1.1
2,252,566	+		MPMX19_02155	0.25	+0.3
2,252,566	+		MPMX19_02155	0.25	+0.5
2,252,566	+		MPMX19_02155	0.25	-2.0
2,252,566	+		MPMX19_02155	0.25	-0.4
2,252,567	-		MPMX19_02155	0.25	-1.2
2,252,567	-		MPMX19_02155	0.25	-1.4
2,252,567	-		MPMX19_02155	0.25	-0.1
2,252,567	-		MPMX19_02155	0.25	+0.7
2,252,567	-		MPMX19_02155	0.25	-1.4
2,252,567	-		MPMX19_02155	0.25	-0.5
2,252,567	-		MPMX19_02155	0.25	+0.5
2,252,567	-		MPMX19_02155	0.25	-0.1
2,252,567	-		MPMX19_02155	0.25	-1.5
2,252,728	+		MPMX19_02155	0.35	+0.2
2,252,860	+		MPMX19_02155	0.44	+0.8
2,252,861	-		MPMX19_02155	0.44	-1.1
2,252,861	-		MPMX19_02155	0.44	+0.5
2,252,869	+		MPMX19_02155	0.44	-0.3
2,252,869	+		MPMX19_02155	0.44	-0.5
2,252,869	+		MPMX19_02155	0.44	-1.4
2,252,869	+		MPMX19_02155	0.44	+0.0
2,252,869	+		MPMX19_02155	0.44	-0.1
2,252,869	+		MPMX19_02155	0.44	-0.8
2,252,869	+		MPMX19_02155	0.44	-0.7
2,252,869	+		MPMX19_02155	0.44	+0.2
2,252,869	+		MPMX19_02155	0.44	+1.8
2,252,869	+		MPMX19_02155	0.44	-2.5
2,252,869	+		MPMX19_02155	0.44	-1.3
2,252,869	+		MPMX19_02155	0.44	-0.1
2,252,869	+		MPMX19_02155	0.44	-1.5
2,252,869	+		MPMX19_02155	0.44	+0.2
2,252,869	+		MPMX19_02155	0.44	-0.8
2,252,869	+		MPMX19_02155	0.44	-0.1
2,252,870	-		MPMX19_02155	0.44	-0.9
2,252,870	-		MPMX19_02155	0.44	-1.1
2,252,870	-		MPMX19_02155	0.44	+0.5
2,252,870	-		MPMX19_02155	0.44	-1.7
2,252,870	-		MPMX19_02155	0.44	-2.5
2,252,870	-		MPMX19_02155	0.44	-0.1
2,252,870	-		MPMX19_02155	0.44	-0.7
2,252,870	-		MPMX19_02155	0.44	-2.1
2,252,870	-		MPMX19_02155	0.44	-0.8
2,252,870	-		MPMX19_02155	0.44	+0.5
2,252,914	+		MPMX19_02155	0.47	+0.5
2,252,915	-		MPMX19_02155	0.47	+0.7
2,252,915	-		MPMX19_02155	0.47	-0.5
2,252,920	+		MPMX19_02155	0.47	+0.5
2,252,920	+		MPMX19_02155	0.47	-0.7
2,252,921	-		MPMX19_02155	0.47	-1.0
2,252,921	-		MPMX19_02155	0.47	+0.1
2,252,921	-		MPMX19_02155	0.47	-0.3
2,252,921	-		MPMX19_02155	0.47	-0.2
2,252,921	-		MPMX19_02155	0.47	-2.0
2,252,921	-		MPMX19_02155	0.47	+1.5
2,252,998	+		MPMX19_02155	0.52	-0.8
2,252,998	+		MPMX19_02155	0.52	-0.2
2,252,999	-		MPMX19_02155	0.52	-0.3