Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02102

Experiment: NF_with10percent_fullN

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02101 and MPMX19_02102 are separated by 86 nucleotidesMPMX19_02102 and MPMX19_02103 are separated by 85 nucleotides MPMX19_02101: MPMX19_02101 - ATP synthase subunit beta, at 2,198,170 to 2,199,591 _02101 MPMX19_02102: MPMX19_02102 - ATP synthase gamma chain, at 2,199,678 to 2,200,562 _02102 MPMX19_02103: MPMX19_02103 - ATP synthase subunit alpha, at 2,200,648 to 2,202,177 _02103 Position (kb) 2199 2200 2201Strain fitness (log2 ratio) -1 0 1at 2200.607 kb on - strandat 2200.607 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NF_with10percent_fullN
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2,200,607 - +0.9
2,200,607 - -0.8

Or see this region's nucleotide sequence