Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01580

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,651,222	+		MPMX19_01578	0.38	+2.1
1,651,222	+		MPMX19_01578	0.38	+0.1
1,651,222	+		MPMX19_01578	0.38	-0.0
1,651,223	-		MPMX19_01578	0.38	+0.4
1,651,232	-		MPMX19_01578	0.40	+0.2
1,651,246	+		MPMX19_01578	0.43	-0.9
1,651,247	-		MPMX19_01578	0.43	+0.1
1,651,247	-		MPMX19_01578	0.43	+0.9
1,651,540	-				+1.7
1,651,540	-				-0.4
1,651,583	+				-0.3
1,651,583	+				+0.7
1,651,583	+				-0.6
1,651,583	+				-0.3
1,651,583	+				-0.7
1,651,584	-				+0.8
1,651,584	-				-2.0
1,651,584	-				+0.5
1,651,584	-				+1.7
1,651,584	-				-2.3
1,651,584	-				-1.7
1,651,584	-				+0.7
1,651,584	-				+0.1
1,651,584	-				-1.3
1,651,584	-				-0.3
1,651,584	-				-0.7
1,651,584	-				-0.1
1,651,584	-				-1.5
1,651,585	+				-0.3
1,651,585	+				+0.1
1,651,585	+				-1.3
1,651,585	+				-0.3
1,651,585	+				+0.5
1,651,585	+				-0.3
1,651,586	-				-0.1
1,651,586	-				+0.0
1,651,586	-				-1.3
1,651,586	-				-0.9
1,651,586	-				+0.7
1,651,586	-				-0.0
1,651,586	-				-2.4
1,651,586	-				+0.1
1,651,586	-				+0.7
1,651,586	-				-0.3
1,651,586	-				-1.2
1,651,586	-				+2.0
1,651,641	+				+0.7
1,651,641	+				-0.1
1,651,641	+				+0.7
1,651,641	+				-0.9
1,651,653	+				+0.1
1,651,653	+				-0.1
1,651,653	+				+0.1
1,651,653	+				-0.6
1,651,653	+				+0.1
1,651,653	+				-0.3
1,651,653	+				+0.3
1,652,105	+				+0.1
1,652,106	-				+0.5
1,652,106	-				-0.7
1,652,149	+				-2.2
1,652,149	+				+2.7
1,652,149	+				-0.4
1,652,150	-				+0.1
1,652,305	+		MPMX19_01580	0.10	-0.7
1,652,305	+		MPMX19_01580	0.10	-1.0
1,652,305	+		MPMX19_01580	0.10	+1.4
1,652,305	+		MPMX19_01580	0.10	-0.6
1,652,306	-		MPMX19_01580	0.11	-2.4
1,652,306	-		MPMX19_01580	0.11	-0.1
1,652,306	-		MPMX19_01580	0.11	-1.6
1,652,306	-		MPMX19_01580	0.11	-1.3
1,652,383	+		MPMX19_01580	0.20	-0.4
1,652,383	+		MPMX19_01580	0.20	-0.6
1,652,383	+		MPMX19_01580	0.20	+0.1
1,652,383	+		MPMX19_01580	0.20	-0.3
1,652,383	+		MPMX19_01580	0.20	-0.3
1,652,383	+		MPMX19_01580	0.20	-0.3
1,652,383	+		MPMX19_01580	0.20	-0.6
1,652,383	+		MPMX19_01580	0.20	+0.4
1,652,383	+		MPMX19_01580	0.20	-0.7
1,652,383	+		MPMX19_01580	0.20	+0.1
1,652,383	+		MPMX19_01580	0.20	-0.5
1,652,384	-		MPMX19_01580	0.20	-0.9
1,652,384	-		MPMX19_01580	0.20	+0.1
1,652,384	-		MPMX19_01580	0.20	-0.7
1,652,384	-		MPMX19_01580	0.20	-0.3
1,652,384	-		MPMX19_01580	0.20	-1.8
1,652,384	-		MPMX19_01580	0.20	+0.1
1,652,384	-		MPMX19_01580	0.20	-1.2
1,652,384	-		MPMX19_01580	0.20	-2.3
1,652,384	-		MPMX19_01580	0.20	-0.5
1,652,384	-		MPMX19_01580	0.20	+0.7
1,652,384	-		MPMX19_01580	0.20	-0.3
1,652,497	+		MPMX19_01580	0.33	-0.6
1,652,497	+		MPMX19_01580	0.33	+0.1
1,652,497	+		MPMX19_01580	0.33	+0.1
1,652,497	+		MPMX19_01580	0.33	-0.6
1,652,497	+		MPMX19_01580	0.33	+0.7
1,652,497	+		MPMX19_01580	0.33	-0.1
1,652,497	+		MPMX19_01580	0.33	-0.9
1,652,498	-		MPMX19_01580	0.34	-1.3
1,652,498	-		MPMX19_01580	0.34	-1.6
1,652,498	-		MPMX19_01580	0.34	+0.1
1,652,498	-		MPMX19_01580	0.34	-1.3
1,652,498	-		MPMX19_01580	0.34	-0.3
1,652,498	-		MPMX19_01580	0.34	-1.5
1,652,683	+		MPMX19_01580	0.56	-0.6
1,652,683	+		MPMX19_01580	0.56	-1.3
1,652,683	+		MPMX19_01580	0.56	-2.8
1,652,683	+		MPMX19_01580	0.56	-0.3
1,652,683	+		MPMX19_01580	0.56	+0.2
1,652,683	+		MPMX19_01580	0.56	-1.1
1,652,683	+		MPMX19_01580	0.56	-0.1
1,652,683	+		MPMX19_01580	0.56	+0.4
1,652,684	-		MPMX19_01580	0.56	-0.6
1,652,684	-		MPMX19_01580	0.56	+0.7
1,652,684	-		MPMX19_01580	0.56	+1.1
1,652,684	-		MPMX19_01580	0.56	+0.6
1,652,684	-		MPMX19_01580	0.56	+1.3
1,652,932	+		MPMX19_01580	0.86	-1.2
1,652,932	+		MPMX19_01580	0.86	-0.6
1,652,932	+		MPMX19_01580	0.86	-0.6
1,652,933	-		MPMX19_01580	0.86	-0.6
1,652,933	-		MPMX19_01580	0.86	-1.0
1,652,933	-		MPMX19_01580	0.86	+0.1
1,652,974	+				-0.3
1,652,974	+				-0.3
1,652,974	+				-0.3
1,652,974	+				-0.8
1,652,974	+				-0.6
1,652,974	+				-0.9
1,652,974	+				-0.6
1,652,974	+				-1.3
1,652,974	+				-1.2
1,652,974	+				+0.7
1,652,974	+				+0.4
1,652,974	+				-0.6
1,652,974	+				-0.9
1,652,974	+				+0.7
1,652,974	+				-0.3
1,652,974	+				-1.3
1,652,975	-				-0.3
1,652,975	-				+0.5
1,652,975	-				-1.1
1,652,975	-				+0.2
1,652,975	-				-1.6
1,652,975	-				-1.9
1,652,975	-				-0.9
1,652,975	-				-0.6
1,652,975	-				-1.3
1,652,975	-				+1.1
1,652,975	-				-0.1
1,652,975	-				-1.6
1,652,975	-				+0.4
1,652,975	-				-0.9
1,652,975	-				+0.5
1,652,975	-				-0.4
1,652,975	-				-1.9
1,652,975	-				-0.3
1,652,975	-				+2.0
1,652,975	-				-2.6
1,652,975	-				+1.3
1,653,049	+				-0.6
1,653,049	+				-2.5
1,653,050	-				-0.1
1,653,059	+				-0.2
1,653,059	+				-1.3
1,653,059	+				+1.1
1,653,059	+				-0.3
1,653,059	+				+0.5
1,653,060	-				-0.5
1,653,060	-				-0.5
1,653,060	-				-0.1
1,653,073	+				-1.8
1,653,073	+				+0.1
1,653,073	+				-0.2
1,653,073	+				+0.3
1,653,074	-				-1.6
1,653,074	-				-0.3
1,653,074	-				-1.6
1,653,074	-				-1.5
1,653,074	-				+0.7
1,653,074	-				-1.6
1,653,074	-				-1.9
1,653,074	-				-0.6
1,653,092	+				-0.6
1,653,092	+				+0.7
1,653,092	+				+0.3
1,653,092	+				+0.7
1,653,092	+				+0.9
1,653,092	+				+1.3
1,653,092	+				+0.1
1,653,093	-				-0.6
1,653,093	-				-0.2
1,653,093	-				-2.0
1,653,093	-				-0.2
1,653,093	-				-0.3
1,653,093	-				-0.3
1,653,093	-				-0.1
1,653,093	-				+0.1
1,653,093	-				+0.7
1,653,093	-				-1.5
1,653,093	-				+0.9
1,653,093	-				+0.1
1,653,276	+				-0.1
1,653,276	+				+1.7
1,653,276	+				-1.1
1,653,276	+				-1.1
1,653,277	-				-0.8
1,653,329	+				-2.3
1,653,329	+				-1.7
1,653,329	+				-1.1
1,653,329	+				-0.6
1,653,329	+				-0.4
1,653,329	+				+0.9
1,653,329	+				-0.3
1,653,329	+				+0.5
1,653,329	+				+0.4
1,653,329	+				+1.3
1,653,329	+				-1.5
1,653,329	+				+0.7
1,653,329	+				-2.6
1,653,329	+				+1.7
1,653,329	+				-0.6
1,653,329	+				-1.5
1,653,329	+				+0.6
1,653,329	+				-0.3
1,653,329	+				+0.7
1,653,329	+				+0.1
1,653,329	+				-0.5
1,653,329	+				+0.5
1,653,329	+				-0.3
1,653,329	+				-2.1
1,653,329	+				-0.0
1,653,329	+				+1.4
1,653,329	+				+0.1
1,653,329	+				-2.6
1,653,329	+				+0.1
1,653,329	+				-0.6
1,653,329	+				-1.2
1,653,329	+				-0.6
1,653,329	+				-1.9
1,653,329	+				-0.3
1,653,329	+				-0.1
1,653,329	+				+0.3
1,653,329	+				+1.1
1,653,329	+				-1.9
1,653,329	+				+0.7
1,653,329	+				-0.5
1,653,329	+				-0.1
1,653,329	+				-0.6
1,653,330	-				-1.2
1,653,330	-				-0.6
1,653,330	-				-1.0
1,653,330	-				+0.7
1,653,330	-				-0.6
1,653,330	-				-2.9
1,653,330	-				-0.1
1,653,330	-				+1.1
1,653,330	-				-0.3
1,653,330	-				-0.0
1,653,330	-				-0.3
1,653,330	-				+0.9
1,653,330	-				+0.9
1,653,330	-				-0.5
1,653,330	-				+0.6
1,653,330	-				-0.4
1,653,330	-				+0.1
1,653,330	-				-0.6
1,653,330	-				-2.2
1,653,330	-				-0.9
1,653,330	-				-0.3
1,653,330	-				+1.4
1,653,330	-				-0.1
1,653,330	-				-0.9
1,653,330	-				-2.2
1,653,330	-				-1.6
1,653,330	-				-0.2
1,653,330	-				-0.6
1,653,330	-				-0.7
1,653,330	-				-0.3
1,653,330	-				+0.5
1,653,330	-				-1.0
1,653,330	-				-0.1
1,653,330	-				-2.1
1,653,330	-				+0.4
1,653,330	-				-1.1
1,653,330	-				-1.2
1,653,330	-				-0.9
1,653,330	-				-0.1
1,653,330	-				-0.9
1,653,330	-				-0.6
1,653,330	-				-2.4
1,653,330	-				-0.2
1,653,330	-				+1.7
1,653,330	-				-0.2
1,653,330	-				-1.1
1,653,330	-				-0.9
1,653,331	+				-0.3
1,653,331	+				-0.3
1,653,331	+				+0.1
1,653,331	+				-0.3
1,653,331	+				-0.7
1,653,331	+				+0.2
1,653,331	+				-1.3
1,653,331	+				-0.3
1,653,331	+				-0.3
1,653,331	+				+0.3
1,653,331	+				-0.3
1,653,331	+				-0.1
1,653,331	+				-0.9
1,653,331	+				-1.1
1,653,331	+				-1.3
1,653,331	+				-0.1
1,653,331	+				+0.3
1,653,331	+				+0.5
1,653,331	+				-0.3
1,653,331	+				-0.2
1,653,331	+				-0.5
1,653,331	+				-1.9
1,653,331	+				+0.1
1,653,331	+				-0.6
1,653,331	+				+0.1
1,653,332	-				-0.8
1,653,332	-				-1.8
1,653,332	-				-0.6
1,653,332	-				-0.2
1,653,332	-				+1.0
1,653,332	-				-1.9
1,653,332	-				+1.7
1,653,332	-				-0.1
1,653,332	-				-0.6
1,653,332	-				-0.9
1,653,332	-				-1.1
1,653,332	-				+0.1
1,653,332	-				+0.1
1,653,332	-				-0.1
1,653,332	-				-2.4
1,653,332	-				-0.9
1,653,332	-				-0.3
1,653,332	-				-0.6
1,653,332	-				-0.1
1,653,332	-				-1.8
1,653,332	-				+1.7
1,653,332	-				-0.3
1,653,332	-				-0.9
1,653,332	-				-0.9
1,653,332	-				-1.1
1,653,332	-				-1.3
1,653,332	-				+0.4
1,653,332	-				+0.7
1,653,332	-				+0.1
1,653,332	-				-0.6
1,653,521	+		MPMX19_01581	0.13	-1.5
1,653,521	+		MPMX19_01581	0.13	-0.3
1,653,521	+		MPMX19_01581	0.13	-0.9
1,653,521	+		MPMX19_01581	0.13	-1.6
1,653,521	+		MPMX19_01581	0.13	-1.0
1,653,521	+		MPMX19_01581	0.13	+0.3
1,653,521	+		MPMX19_01581	0.13	+1.1
1,653,521	+		MPMX19_01581	0.13	-0.2
1,653,521	+		MPMX19_01581	0.13	-0.6
1,653,521	+		MPMX19_01581	0.13	-0.3
1,653,522	-		MPMX19_01581	0.13	-1.1
1,653,522	-		MPMX19_01581	0.13	-1.0
1,653,522	-		MPMX19_01581	0.13	-0.0
1,653,522	-		MPMX19_01581	0.13	-2.5
1,653,522	-		MPMX19_01581	0.13	-1.6
1,653,522	-		MPMX19_01581	0.13	-2.0
1,653,522	-		MPMX19_01581	0.13	-0.1
1,653,522	-		MPMX19_01581	0.13	-1.2
1,653,522	-		MPMX19_01581	0.13	+1.7
1,653,522	-		MPMX19_01581	0.13	+0.7
1,653,522	-		MPMX19_01581	0.13	+0.2
1,653,522	-		MPMX19_01581	0.13	-2.5
1,653,522	-		MPMX19_01581	0.13	-0.3
1,653,522	-		MPMX19_01581	0.13	-1.5
1,653,565	+		MPMX19_01581	0.15	-0.3
1,653,565	+		MPMX19_01581	0.15	+0.7
1,653,863	+		MPMX19_01581	0.27	-0.8
1,653,863	+		MPMX19_01581	0.27	-0.6
1,653,863	+		MPMX19_01581	0.27	+0.1
1,653,863	+		MPMX19_01581	0.27	+0.1
1,653,863	+		MPMX19_01581	0.27	+0.4
1,653,863	+		MPMX19_01581	0.27	+0.5
1,653,863	+		MPMX19_01581	0.27	-2.2
1,653,863	+		MPMX19_01581	0.27	-0.5
1,653,863	+		MPMX19_01581	0.27	+0.7
1,653,863	+		MPMX19_01581	0.27	+0.1
1,653,863	+		MPMX19_01581	0.27	+1.3
1,653,863	+		MPMX19_01581	0.27	+0.1
1,653,863	+		MPMX19_01581	0.27	-1.1
1,653,863	+		MPMX19_01581	0.27	+0.6
1,653,863	+		MPMX19_01581	0.27	-1.5
1,653,864	-		MPMX19_01581	0.27	-0.9
1,653,864	-		MPMX19_01581	0.27	-1.1
1,653,864	-		MPMX19_01581	0.27	-0.3
1,653,864	-		MPMX19_01581	0.27	-0.3
1,653,864	-		MPMX19_01581	0.27	-0.3
1,653,864	-		MPMX19_01581	0.27	-0.3
1,653,864	-		MPMX19_01581	0.27	-0.1
1,653,864	-		MPMX19_01581	0.27	+0.7
1,653,864	-		MPMX19_01581	0.27	-0.3
1,653,864	-		MPMX19_01581	0.27	-0.2
1,653,864	-		MPMX19_01581	0.27	-0.3
1,654,027	+		MPMX19_01581	0.34	+1.3
1,654,027	+		MPMX19_01581	0.34	-0.1
1,654,027	+		MPMX19_01581	0.34	-1.9
1,654,027	+		MPMX19_01581	0.34	-1.8