Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01434

Experiment: NF_with10percent_fullN

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NF_with10percent_fullN
1,501,138	-				-1.1
1,501,206	+				-1.2
1,501,206	+				-0.4
1,501,206	+				+1.2
1,501,206	+				-0.5
1,501,206	+				-1.4
1,501,206	+				+0.0
1,501,206	+				+1.0
1,501,206	+				+0.2
1,501,207	-				-1.4
1,501,207	-				-1.2
1,501,207	-				+0.6
1,501,235	+				-0.2
1,501,235	+				-1.1
1,501,235	+				-0.1
1,501,235	+				-0.8
1,501,235	+				-1.5
1,501,235	+				-1.3
1,501,235	+				+1.2
1,501,236	-				+0.1
1,501,236	-				+1.6
1,501,249	+				-1.0
1,501,249	+				+0.6
1,501,250	-				-0.7
1,501,250	-				+0.0
1,501,250	-				+1.0
1,501,250	-				-0.7
1,501,311	+				-0.3
1,501,311	+				-0.4
1,501,311	+				-0.5
1,501,311	+				+0.2
1,501,311	+				-0.7
1,501,311	+				+0.0
1,501,312	-				-1.0
1,501,312	-				+3.2
1,501,312	-				-0.7
1,501,312	-				+0.0
1,501,312	-				-0.4
1,501,312	-				+0.0
1,501,312	-				-1.0
1,501,312	-				-0.4
1,501,312	-				+0.6
1,501,312	-				+1.6
1,501,312	-				-1.0
1,501,327	+				+0.4
1,501,327	+				+0.0
1,501,341	-				-1.0
1,501,344	+				-0.7
1,501,381	+				+1.2
1,501,382	-				+0.3
1,501,482	+				+1.6
1,501,496	+				+0.1
1,501,497	-				+0.2
1,501,556	+				-0.9
1,501,563	+				+0.3
1,501,563	+				-0.7
1,501,563	+				+1.0
1,501,563	+				-1.5
1,501,563	+				-1.4
1,501,563	+				+0.3
1,501,563	+				-0.2
1,501,563	+				-0.4
1,501,563	+				-1.3
1,501,563	+				-0.8
1,501,563	+				-0.4
1,501,564	-				-1.8
1,501,564	-				+0.0
1,501,564	-				-1.8
1,501,564	-				-1.4
1,501,564	-				-1.2
1,501,564	-				-2.3
1,501,564	-				-1.5
1,501,564	-				-0.1
1,501,564	-				-0.5
1,501,564	-				+0.8
1,501,564	-				-1.7
1,501,564	-				-0.7
1,501,564	-				-0.3
1,501,564	-				-0.5
1,501,564	-				-0.4
1,501,564	-				+0.2
1,501,564	-				+0.0
1,501,590	+				-0.7
1,501,590	+				-0.4
1,501,590	+				-1.1
1,501,591	-				-0.8
1,501,677	+		MPMX19_01434	0.15	-1.0
1,501,677	+		MPMX19_01434	0.15	+0.1
1,501,678	-		MPMX19_01434	0.15	-1.0
1,501,678	-		MPMX19_01434	0.15	-0.4
1,501,678	-		MPMX19_01434	0.15	+0.0
1,501,743	+		MPMX19_01434	0.19	-0.7
1,501,743	+		MPMX19_01434	0.19	-1.2
1,501,743	+		MPMX19_01434	0.19	-0.1
1,501,743	+		MPMX19_01434	0.19	+0.4
1,501,743	+		MPMX19_01434	0.19	+0.2
1,501,743	+		MPMX19_01434	0.19	-0.7
1,501,743	+		MPMX19_01434	0.19	+0.4
1,501,743	+		MPMX19_01434	0.19	-1.0
1,501,743	+		MPMX19_01434	0.19	-1.5
1,501,743	+		MPMX19_01434	0.19	-1.4
1,501,743	+		MPMX19_01434	0.19	-2.1
1,501,743	+		MPMX19_01434	0.19	+1.3
1,501,743	+		MPMX19_01434	0.19	+0.0
1,501,744	-		MPMX19_01434	0.19	+0.0
1,501,744	-		MPMX19_01434	0.19	-0.3
1,501,744	-		MPMX19_01434	0.19	+0.5
1,501,744	-		MPMX19_01434	0.19	+1.4
1,501,744	-		MPMX19_01434	0.19	-0.6
1,501,744	-		MPMX19_01434	0.19	-2.4
1,501,744	-		MPMX19_01434	0.19	-1.2
1,501,744	-		MPMX19_01434	0.19	-0.0
1,501,744	-		MPMX19_01434	0.19	+0.5
1,501,744	-		MPMX19_01434	0.19	+1.6
1,501,744	-		MPMX19_01434	0.19	+0.3
1,501,744	-		MPMX19_01434	0.19	+0.2
1,501,744	-		MPMX19_01434	0.19	-0.6
1,501,754	-		MPMX19_01434	0.19	-0.7
1,501,919	+		MPMX19_01434	0.30	-0.4
1,502,106	+		MPMX19_01434	0.42	+0.0
1,502,106	+		MPMX19_01434	0.42	-1.1
1,502,106	+		MPMX19_01434	0.42	-0.7
1,502,106	+		MPMX19_01434	0.42	+0.8
1,502,106	+		MPMX19_01434	0.42	+1.0
1,502,106	+		MPMX19_01434	0.42	+0.6
1,502,106	+		MPMX19_01434	0.42	-1.1
1,502,106	+		MPMX19_01434	0.42	+0.6
1,502,106	+		MPMX19_01434	0.42	-0.4
1,502,106	+		MPMX19_01434	0.42	-1.3
1,502,106	+		MPMX19_01434	0.42	+0.2
1,502,106	+		MPMX19_01434	0.42	-0.1
1,502,106	+		MPMX19_01434	0.42	+0.5
1,502,106	+		MPMX19_01434	0.42	+0.6
1,502,106	+		MPMX19_01434	0.42	-1.0
1,502,106	+		MPMX19_01434	0.42	+0.2
1,502,107	-		MPMX19_01434	0.42	+1.3
1,502,107	-		MPMX19_01434	0.42	-0.4
1,502,107	-		MPMX19_01434	0.42	+1.4
1,502,107	-		MPMX19_01434	0.42	+0.9
1,502,107	-		MPMX19_01434	0.42	-1.8
1,502,107	-		MPMX19_01434	0.42	-1.0
1,502,107	-		MPMX19_01434	0.42	+0.0
1,502,107	-		MPMX19_01434	0.42	-1.3
1,502,107	-		MPMX19_01434	0.42	-0.4
1,502,107	-		MPMX19_01434	0.42	+0.0
1,502,107	-		MPMX19_01434	0.42	+0.6
1,502,107	-		MPMX19_01434	0.42	+0.3
1,502,107	-		MPMX19_01434	0.42	+0.0
1,502,107	-		MPMX19_01434	0.42	-1.4
1,502,107	-		MPMX19_01434	0.42	-0.1
1,502,107	-		MPMX19_01434	0.42	-0.5
1,502,107	-		MPMX19_01434	0.42	-0.4
1,502,107	-		MPMX19_01434	0.42	+0.4
1,502,118	+		MPMX19_01434	0.43	+0.3
1,502,118	+		MPMX19_01434	0.43	+2.2
1,502,119	-		MPMX19_01434	0.43	-1.4
1,502,145	+		MPMX19_01434	0.44	-0.5
1,502,145	+		MPMX19_01434	0.44	-1.5
1,502,145	+		MPMX19_01434	0.44	+1.0
1,502,145	+		MPMX19_01434	0.44	-0.4
1,502,145	+		MPMX19_01434	0.44	+0.6
1,502,145	+		MPMX19_01434	0.44	-0.3
1,502,145	+		MPMX19_01434	0.44	-0.5
1,502,145	+		MPMX19_01434	0.44	-0.3
1,502,145	+		MPMX19_01434	0.44	-0.4
1,502,145	+		MPMX19_01434	0.44	-0.7
1,502,145	+		MPMX19_01434	0.44	+0.0
1,502,146	-		MPMX19_01434	0.44	-0.4
1,502,146	-		MPMX19_01434	0.44	-0.4
1,502,146	-		MPMX19_01434	0.44	-1.4
1,502,146	-		MPMX19_01434	0.44	+1.0
1,502,146	-		MPMX19_01434	0.44	-2.0
1,502,146	-		MPMX19_01434	0.44	+0.0
1,502,146	-		MPMX19_01434	0.44	-1.5
1,502,146	-		MPMX19_01434	0.44	-1.0
1,502,148	+		MPMX19_01434	0.44	+1.0
1,502,148	+		MPMX19_01434	0.44	-1.5
1,502,148	+		MPMX19_01434	0.44	-0.7
1,502,148	+		MPMX19_01434	0.44	-0.4
1,502,148	+		MPMX19_01434	0.44	-0.7
1,502,149	-		MPMX19_01434	0.45	-0.0
1,502,149	-		MPMX19_01434	0.45	+0.0
1,502,414	+		MPMX19_01434	0.61	+2.2
1,502,414	+		MPMX19_01434	0.61	-1.1
1,502,414	+		MPMX19_01434	0.61	+1.2
1,502,414	+		MPMX19_01434	0.61	+1.2
1,502,415	-		MPMX19_01434	0.61	+0.4
1,502,415	-		MPMX19_01434	0.61	+0.6
1,502,415	-		MPMX19_01434	0.61	+0.9
1,502,415	-		MPMX19_01434	0.61	+0.9
1,502,415	-		MPMX19_01434	0.61	+0.5
1,502,415	-		MPMX19_01434	0.61	+1.3
1,502,415	-		MPMX19_01434	0.61	-1.4
1,502,415	-		MPMX19_01434	0.61	-0.8
1,502,415	-		MPMX19_01434	0.61	-0.8
1,502,415	-		MPMX19_01434	0.61	+0.0
1,502,851	+		MPMX19_01434	0.89	+0.2
1,502,853	+		MPMX19_01434	0.89	-0.2
1,502,853	+		MPMX19_01434	0.89	-0.2
1,502,853	+		MPMX19_01434	0.89	-1.3
1,502,853	+		MPMX19_01434	0.89	+0.3
1,502,853	+		MPMX19_01434	0.89	-0.7
1,502,853	+		MPMX19_01434	0.89	+1.0
1,502,853	+		MPMX19_01434	0.89	-0.4
1,502,853	+		MPMX19_01434	0.89	-0.2
1,502,853	+		MPMX19_01434	0.89	-2.2
1,502,853	+		MPMX19_01434	0.89	-0.9
1,502,853	+		MPMX19_01434	0.89	-0.4
1,502,853	+		MPMX19_01434	0.89	-0.6
1,502,853	+		MPMX19_01434	0.89	-0.1
1,502,853	+		MPMX19_01434	0.89	-0.4
1,502,853	+		MPMX19_01434	0.89	+2.2
1,502,853	+		MPMX19_01434	0.89	-0.4
1,502,854	-		MPMX19_01434	0.89	-0.7
1,502,854	-		MPMX19_01434	0.89	+0.3
1,502,854	-		MPMX19_01434	0.89	-2.2
1,502,854	-		MPMX19_01434	0.89	+0.6
1,502,854	-		MPMX19_01434	0.89	-1.2
1,502,854	-		MPMX19_01434	0.89	-0.6
1,502,854	-		MPMX19_01434	0.89	+0.2
1,502,854	-		MPMX19_01434	0.89	-0.3
1,502,854	-		MPMX19_01434	0.89	+0.6
1,502,854	-		MPMX19_01434	0.89	-2.1
1,502,854	-		MPMX19_01434	0.89	-0.2
1,502,854	-		MPMX19_01434	0.89	-1.0
1,502,854	-		MPMX19_01434	0.89	-0.5
1,502,854	-		MPMX19_01434	0.89	-2.2
1,502,854	-		MPMX19_01434	0.89	+0.0
1,502,854	-		MPMX19_01434	0.89	+0.0
1,502,979	+				+0.3
1,502,979	+				+0.5
1,502,979	+				-1.3
1,502,979	+				+0.4
1,502,979	+				-0.5
1,502,979	+				+1.0
1,502,979	+				-0.6
1,502,979	+				-2.0
1,502,979	+				+0.0
1,502,979	+				-0.3
1,502,979	+				-1.0
1,502,979	+				-0.7
1,502,979	+				-2.1
1,502,979	+				+0.2
1,502,979	+				-0.4
1,502,979	+				+0.1
1,502,979	+				-0.4
1,502,979	+				-0.7
1,502,979	+				+0.3
1,502,980	-				-0.7
1,502,980	-				-0.3
1,502,980	-				+0.0
1,502,980	-				-1.5
1,502,980	-				+1.0
1,502,980	-				-1.8
1,502,980	-				-0.2
1,502,980	-				-0.4
1,503,019	-				-1.7
1,503,019	-				-1.0
1,503,019	-				-1.0
1,503,019	-				-0.1
1,503,019	-				-1.0
1,503,028	-				+0.4
1,503,863	+				+0.6
1,503,863	+				+0.1
1,503,863	+				+0.6
1,503,863	+				-0.3
1,503,873	+				+0.3
1,503,873	+				-0.9
1,503,873	+				+0.2
1,503,909	+				-0.7
1,503,909	+				-1.4
1,503,909	+				-0.4
1,503,909	+				+1.2
1,503,909	+				-1.2
1,503,909	+				-0.4
1,503,909	+				+1.1
1,503,909	+				+0.6
1,503,909	+				-0.5
1,503,909	+				-2.2
1,503,909	+				+0.6
1,503,909	+				-0.7
1,503,909	+				+0.2
1,503,909	+				+0.1
1,503,909	+				+0.4
1,503,910	-				+0.2
1,503,910	-				-0.7
1,503,910	-				-1.8
1,503,910	-				+0.1
1,503,910	-				-0.2
1,503,910	-				-0.7