Experiment: NF_with10percent_fullN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00667 and MPMX19_00668 are separated by 108 nucleotides MPMX19_00668 and MPMX19_00669 are separated by 417 nucleotides MPMX19_00669 and MPMX19_00670 are separated by 54 nucleotides
MPMX19_00667: MPMX19_00667 - Single-stranded-DNA-specific exonuclease RecJ, at 689,169 to 690,965
_00667
MPMX19_00668: MPMX19_00668 - tRNA-Glu, at 691,074 to 691,149
_00668
MPMX19_00669: MPMX19_00669 - hypothetical protein, at 691,567 to 691,851
_00669
MPMX19_00670: MPMX19_00670 - tRNA-dihydrouridine(20/20a) synthase, at 691,906 to 692,931
_00670
Position (kb) 691
692 Strain fitness (log2 ratio) -2
-1
0
1 at 690.983 kb on + strand at 691.004 kb on - strand at 691.168 kb on + strand at 691.168 kb on + strand at 691.168 kb on + strand at 691.168 kb on + strand at 691.168 kb on + strand at 691.287 kb on + strand at 691.333 kb on + strand at 691.334 kb on - strand at 691.334 kb on - strand at 691.366 kb on + strand at 691.366 kb on + strand at 691.423 kb on + strand at 691.432 kb on + strand at 691.432 kb on + strand at 691.432 kb on + strand at 691.432 kb on + strand at 691.432 kb on + strand at 691.433 kb on - strand at 691.433 kb on - strand at 691.433 kb on - strand at 691.433 kb on - strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.537 kb on + strand at 691.538 kb on - strand at 691.538 kb on - strand at 691.538 kb on - strand at 691.538 kb on - strand at 691.636 kb on + strand, within MPMX19_00669 at 691.636 kb on + strand, within MPMX19_00669 at 691.636 kb on + strand, within MPMX19_00669 at 691.636 kb on + strand, within MPMX19_00669 at 691.636 kb on + strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.637 kb on - strand, within MPMX19_00669 at 691.731 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.759 kb on + strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.760 kb on - strand, within MPMX19_00669 at 691.869 kb on - strand at 691.869 kb on - strand at 691.869 kb on - strand at 691.889 kb on + strand at 691.889 kb on + strand at 691.889 kb on + strand at 691.972 kb on + strand at 691.972 kb on + strand at 691.972 kb on + strand at 691.973 kb on - strand at 691.973 kb on - strand at 691.973 kb on - strand at 691.973 kb on - strand at 691.973 kb on - strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.008 kb on + strand at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670 at 692.009 kb on - strand, within MPMX19_00670
Per-strain Table
Position Strand Gene LocusTag Fraction NF_with10percent_fullN remove 690,983 + +1.1 691,004 - +0.1 691,168 + +1.2 691,168 + -1.2 691,168 + -0.9 691,168 + -0.4 691,168 + +0.6 691,287 + +0.3 691,333 + -1.8 691,334 - +0.8 691,334 - -1.7 691,366 + +1.6 691,366 + -0.1 691,423 + -1.4 691,432 + -1.4 691,432 + -0.7 691,432 + +0.1 691,432 + +0.3 691,432 + +0.3 691,433 - -0.7 691,433 - -0.9 691,433 - +0.8 691,433 - -0.4 691,537 + -0.9 691,537 + -0.4 691,537 + -0.7 691,537 + +0.6 691,537 + -1.4 691,537 + -1.5 691,538 - -1.9 691,538 - +0.3 691,538 - -1.3 691,538 - +0.1 691,636 + MPMX19_00669 0.24 -1.4 691,636 + MPMX19_00669 0.24 +0.1 691,636 + MPMX19_00669 0.24 -0.9 691,636 + MPMX19_00669 0.24 -2.4 691,636 + MPMX19_00669 0.24 +1.6 691,637 - MPMX19_00669 0.25 -2.4 691,637 - MPMX19_00669 0.25 +0.1 691,637 - MPMX19_00669 0.25 -0.8 691,637 - MPMX19_00669 0.25 +0.7 691,637 - MPMX19_00669 0.25 -1.5 691,731 + MPMX19_00669 0.58 -2.4 691,759 + MPMX19_00669 0.67 -1.9 691,759 + MPMX19_00669 0.67 -1.9 691,759 + MPMX19_00669 0.67 +0.1 691,759 + MPMX19_00669 0.67 -1.2 691,759 + MPMX19_00669 0.67 -0.2 691,759 + MPMX19_00669 0.67 +0.2 691,759 + MPMX19_00669 0.67 -1.5 691,759 + MPMX19_00669 0.67 +0.1 691,759 + MPMX19_00669 0.67 -0.4 691,759 + MPMX19_00669 0.67 -0.9 691,759 + MPMX19_00669 0.67 +0.4 691,759 + MPMX19_00669 0.67 +0.1 691,759 + MPMX19_00669 0.67 -1.3 691,760 - MPMX19_00669 0.68 -1.4 691,760 - MPMX19_00669 0.68 -1.5 691,760 - MPMX19_00669 0.68 +0.5 691,760 - MPMX19_00669 0.68 -1.0 691,760 - MPMX19_00669 0.68 -0.4 691,760 - MPMX19_00669 0.68 -1.4 691,760 - MPMX19_00669 0.68 -1.4 691,760 - MPMX19_00669 0.68 +0.5 691,760 - MPMX19_00669 0.68 -0.7 691,760 - MPMX19_00669 0.68 -0.4 691,760 - MPMX19_00669 0.68 +0.3 691,760 - MPMX19_00669 0.68 -1.3 691,760 - MPMX19_00669 0.68 -0.4 691,760 - MPMX19_00669 0.68 -0.7 691,760 - MPMX19_00669 0.68 +1.1 691,869 - +0.5 691,869 - -1.1 691,869 - -1.4 691,889 + -1.8 691,889 + +0.1 691,889 + +0.8 691,972 + -0.9 691,972 + -0.4 691,972 + -1.2 691,973 - -0.9 691,973 - -0.1 691,973 - +0.1 691,973 - +0.8 691,973 - -0.8 692,008 + +1.2 692,008 + -0.9 692,008 + -0.1 692,008 + -1.9 692,008 + -0.4 692,008 + -0.5 692,008 + -0.2 692,008 + +0.2 692,008 + +0.1 692,009 - MPMX19_00670 0.10 +1.3 692,009 - MPMX19_00670 0.10 -0.8 692,009 - MPMX19_00670 0.10 -1.0 692,009 - MPMX19_00670 0.10 -0.2 692,009 - MPMX19_00670 0.10 -1.5 692,009 - MPMX19_00670 0.10 -0.9 692,009 - MPMX19_00670 0.10 -1.1 692,009 - MPMX19_00670 0.10 +0.5 692,009 - MPMX19_00670 0.10 -0.3 692,009 - MPMX19_00670 0.10 -2.3 692,009 - MPMX19_00670 0.10 -0.2
Or see this region's nucleotide sequence