Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03141

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03141 and MPMX26_03142 are separated by 102 nucleotidesMPMX26_03142 and MPMX26_03143 are separated by 528 nucleotides MPMX26_03141: MPMX26_03141 - hypothetical protein, at 1 to 948 _03141 MPMX26_03142: MPMX26_03142 - hypothetical protein, at 1,051 to 1,371 _03142 MPMX26_03143: MPMX26_03143 - DNA primase TraC, at 1,900 to 2,763 _03143 Position (kb) 0 1Strain fitness (log2 ratio) -2 -1 0 1at 0.018 kb on + strandat 0.046 kb on + strandat 0.107 kb on + strand, within MPMX26_03141at 0.118 kb on + strand, within MPMX26_03141at 0.127 kb on + strand, within MPMX26_03141at 0.156 kb on + strand, within MPMX26_03141at 0.170 kb on + strand, within MPMX26_03141at 0.190 kb on + strand, within MPMX26_03141at 0.190 kb on + strand, within MPMX26_03141at 0.293 kb on + strand, within MPMX26_03141at 0.358 kb on - strand, within MPMX26_03141at 0.405 kb on + strand, within MPMX26_03141at 0.421 kb on + strand, within MPMX26_03141at 0.459 kb on + strand, within MPMX26_03141at 0.529 kb on + strand, within MPMX26_03141at 0.536 kb on + strand, within MPMX26_03141at 0.587 kb on + strand, within MPMX26_03141at 0.597 kb on + strand, within MPMX26_03141at 0.597 kb on + strand, within MPMX26_03141at 0.636 kb on + strand, within MPMX26_03141at 0.650 kb on + strand, within MPMX26_03141at 0.650 kb on + strand, within MPMX26_03141at 0.650 kb on + strand, within MPMX26_03141at 0.650 kb on + strand, within MPMX26_03141at 0.708 kb on + strand, within MPMX26_03141at 0.755 kb on + strand, within MPMX26_03141at 0.838 kb on + strand, within MPMX26_03141at 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.871 kb on + strandat 0.876 kb on + strandat 0.881 kb on + strandat 0.916 kb on + strandat 0.926 kb on + strandat 0.957 kb on - strandat 1.039 kb on + strandat 1.049 kb on - strandat 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.258 kb on + strand, within MPMX26_03142at 1.266 kb on - strand, within MPMX26_03142at 1.268 kb on + strand, within MPMX26_03142at 1.297 kb on - strand, within MPMX26_03142at 1.319 kb on - strand, within MPMX26_03142at 1.403 kb on + strandat 1.408 kb on + strandat 1.408 kb on + strandat 1.408 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.526 kb on + strandat 1.527 kb on + strandat 1.527 kb on - strandat 1.527 kb on - strandat 1.527 kb on - strandat 1.527 kb on - strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.529 kb on + strandat 1.534 kb on - strandat 1.534 kb on - strandat 1.534 kb on - strandat 1.534 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.537 kb on - strandat 1.609 kb on - strandat 1.627 kb on + strandat 1.660 kb on + strandat 1.762 kb on + strandat 1.773 kb on + strandat 1.778 kb on + strandat 1.778 kb on + strandat 1.778 kb on + strandat 1.781 kb on - strandat 1.786 kb on - strandat 1.786 kb on - strandat 1.790 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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18 + +0.5
46 + -0.2
107 + MPMX26_03141 0.11 -0.3
118 + MPMX26_03141 0.12 -1.6
127 + MPMX26_03141 0.13 -0.7
156 + MPMX26_03141 0.16 -1.3
170 + MPMX26_03141 0.18 -0.3
190 + MPMX26_03141 0.20 -1.3
190 + MPMX26_03141 0.20 -1.0
293 + MPMX26_03141 0.31 +0.0
358 - MPMX26_03141 0.38 +0.1
405 + MPMX26_03141 0.43 -1.0
421 + MPMX26_03141 0.44 -1.2
459 + MPMX26_03141 0.48 +0.4
529 + MPMX26_03141 0.56 -1.1
536 + MPMX26_03141 0.56 -0.5
587 + MPMX26_03141 0.62 +0.3
597 + MPMX26_03141 0.63 -0.4
597 + MPMX26_03141 0.63 +0.1
636 + MPMX26_03141 0.67 -1.7
650 + MPMX26_03141 0.68 +0.1
650 + MPMX26_03141 0.68 -0.3
650 + MPMX26_03141 0.68 -0.5
650 + MPMX26_03141 0.68 -1.3
708 + MPMX26_03141 0.75 -0.4
755 + MPMX26_03141 0.80 +0.4
838 + MPMX26_03141 0.88 -0.5
871 + -0.2
871 + -0.1
871 + -0.2
871 + +0.1
871 + +0.1
871 + +0.3
871 + +0.3
871 + -0.6
871 + +0.0
871 + -0.2
871 + -0.7
871 + +0.3
871 + -0.2
871 + +0.4
871 + -0.8
871 + +0.7
871 + +0.2
871 + -2.2
876 + -0.2
881 + +1.4
916 + +0.1
926 + -0.4
957 - +0.2
1,039 + -2.3
1,049 - +0.3
1,258 + MPMX26_03142 0.64 -0.6
1,258 + MPMX26_03142 0.64 +0.9
1,258 + MPMX26_03142 0.64 +1.4
1,258 + MPMX26_03142 0.64 +0.2
1,258 + MPMX26_03142 0.64 +1.4
1,258 + MPMX26_03142 0.64 -0.3
1,266 - MPMX26_03142 0.67 +0.1
1,268 + MPMX26_03142 0.68 -0.9
1,297 - MPMX26_03142 0.77 +0.3
1,319 - MPMX26_03142 0.83 +0.8
1,403 + -0.8
1,408 + +0.3
1,408 + +0.6
1,408 + +0.2
1,526 + +0.0
1,526 + -0.6
1,526 + -0.3
1,526 + +1.4
1,526 + +0.5
1,526 + -0.2
1,526 + +0.5
1,527 + +1.4
1,527 - +0.4
1,527 - +0.9
1,527 - -0.2
1,527 - -0.2
1,529 + -1.1
1,529 + -0.3
1,529 + -0.5
1,529 + -0.2
1,529 + +0.1
1,529 + -1.8
1,529 + -0.1
1,529 + -0.2
1,529 + -0.3
1,529 + -1.9
1,529 + -0.9
1,529 + -0.5
1,529 + +0.7
1,529 + +1.4
1,529 + +0.4
1,529 + -0.4
1,529 + -0.5
1,529 + -0.7
1,529 + +0.8
1,529 + -1.7
1,529 + +0.2
1,529 + -0.9
1,529 + +0.4
1,529 + -0.6
1,529 + -0.1
1,529 + -0.1
1,529 + -0.4
1,529 + +0.2
1,529 + -1.0
1,529 + -1.0
1,529 + +0.4
1,529 + -0.2
1,529 + +0.5
1,529 + +0.8
1,529 + +0.4
1,529 + +0.0
1,529 + +0.4
1,529 + -0.2
1,529 + +0.8
1,529 + +0.4
1,529 + -0.8
1,529 + +0.1
1,529 + -0.4
1,529 + +0.7
1,534 - +0.1
1,534 - +0.4
1,534 - +0.5
1,534 - +0.8
1,537 - +0.8
1,537 - +0.1
1,537 - +0.7
1,537 - -0.0
1,537 - +1.0
1,537 - -1.3
1,537 - -0.6
1,537 - +0.4
1,537 - -0.8
1,537 - +0.1
1,537 - -0.9
1,537 - -0.4
1,537 - +1.7
1,537 - -0.0
1,537 - -1.6
1,537 - -0.2
1,537 - +0.8
1,537 - -0.1
1,537 - +0.9
1,537 - -0.6
1,537 - +0.5
1,537 - +0.6
1,537 - +0.8
1,537 - +0.9
1,537 - -0.2
1,537 - -0.2
1,537 - +0.1
1,537 - +1.2
1,537 - -0.6
1,537 - -0.1
1,537 - +0.5
1,537 - -0.8
1,537 - -1.8
1,537 - +0.7
1,537 - +1.7
1,537 - +0.4
1,537 - +0.4
1,537 - -1.1
1,537 - +0.4
1,537 - +1.4
1,537 - -0.9
1,537 - -2.1
1,537 - +1.4
1,537 - +0.2
1,537 - +0.2
1,537 - +0.4
1,537 - +0.2
1,537 - +0.2
1,537 - -0.6
1,609 - -0.6
1,627 + +0.0
1,660 + -0.0
1,762 + -1.6
1,773 + +0.9
1,778 + -0.4
1,778 + -0.6
1,778 + -0.6
1,781 - +0.1
1,786 - +1.0
1,786 - +0.1
1,790 - -0.6

Or see this region's nucleotide sequence