Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03055

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03054 and MPMX26_03055 are separated by 177 nucleotidesMPMX26_03055 and MPMX26_03056 are separated by 318 nucleotides MPMX26_03054: MPMX26_03054 - Long-chain-fatty-acid--CoA ligase, at 3,174,859 to 3,176,517 _03054 MPMX26_03055: MPMX26_03055 - 3-methylmercaptopropionyl-CoA dehydrogenase, at 3,176,695 to 3,178,497 _03055 MPMX26_03056: MPMX26_03056 - hypothetical protein, at 3,178,816 to 3,180,189 _03056 Position (kb) 3176 3177 3178 3179Strain fitness (log2 ratio) -2 -1 0 1 2at 3176.069 kb on + strand, within MPMX26_03054at 3176.100 kb on + strand, within MPMX26_03054at 3176.114 kb on + strand, within MPMX26_03054at 3176.122 kb on - strand, within MPMX26_03054at 3176.122 kb on - strand, within MPMX26_03054at 3176.142 kb on - strand, within MPMX26_03054at 3176.142 kb on - strand, within MPMX26_03054at 3176.147 kb on - strand, within MPMX26_03054at 3176.254 kb on - strand, within MPMX26_03054at 3176.280 kb on - strand, within MPMX26_03054at 3176.438 kb on + strandat 3176.438 kb on + strandat 3176.513 kb on + strandat 3176.519 kb on + strandat 3176.519 kb on + strandat 3176.524 kb on + strandat 3176.547 kb on - strandat 3176.677 kb on - strandat 3176.683 kb on - strandat 3176.710 kb on - strandat 3176.720 kb on - strandat 3176.760 kb on - strandat 3176.767 kb on + strandat 3176.775 kb on - strandat 3176.775 kb on - strandat 3176.824 kb on - strandat 3176.824 kb on - strandat 3176.835 kb on + strandat 3176.848 kb on - strandat 3176.848 kb on - strandat 3176.848 kb on - strandat 3176.848 kb on - strandat 3176.848 kb on - strandat 3176.962 kb on + strand, within MPMX26_03055at 3176.970 kb on - strand, within MPMX26_03055at 3176.984 kb on + strand, within MPMX26_03055at 3176.992 kb on - strand, within MPMX26_03055at 3176.994 kb on + strand, within MPMX26_03055at 3176.994 kb on + strand, within MPMX26_03055at 3177.002 kb on - strand, within MPMX26_03055at 3177.033 kb on - strand, within MPMX26_03055at 3177.099 kb on - strand, within MPMX26_03055at 3177.099 kb on - strand, within MPMX26_03055at 3177.111 kb on - strand, within MPMX26_03055at 3177.238 kb on - strand, within MPMX26_03055at 3177.238 kb on - strand, within MPMX26_03055at 3177.238 kb on - strand, within MPMX26_03055at 3177.273 kb on + strand, within MPMX26_03055at 3177.282 kb on - strand, within MPMX26_03055at 3177.512 kb on + strand, within MPMX26_03055at 3177.528 kb on - strand, within MPMX26_03055at 3177.550 kb on - strand, within MPMX26_03055at 3177.555 kb on - strand, within MPMX26_03055at 3177.559 kb on - strand, within MPMX26_03055at 3177.594 kb on - strand, within MPMX26_03055at 3177.607 kb on - strand, within MPMX26_03055at 3177.607 kb on - strand, within MPMX26_03055at 3177.607 kb on - strand, within MPMX26_03055at 3177.607 kb on - strand, within MPMX26_03055at 3177.612 kb on - strand, within MPMX26_03055at 3177.633 kb on - strand, within MPMX26_03055at 3177.670 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.679 kb on - strand, within MPMX26_03055at 3177.743 kb on - strand, within MPMX26_03055at 3177.745 kb on - strand, within MPMX26_03055at 3177.745 kb on - strand, within MPMX26_03055at 3177.745 kb on - strand, within MPMX26_03055at 3177.748 kb on - strand, within MPMX26_03055at 3177.748 kb on - strand, within MPMX26_03055at 3177.753 kb on - strand, within MPMX26_03055at 3177.753 kb on - strand, within MPMX26_03055at 3177.863 kb on - strand, within MPMX26_03055at 3177.894 kb on - strand, within MPMX26_03055at 3177.894 kb on - strand, within MPMX26_03055at 3177.949 kb on - strand, within MPMX26_03055at 3177.961 kb on - strand, within MPMX26_03055at 3177.961 kb on - strand, within MPMX26_03055at 3177.972 kb on - strand, within MPMX26_03055at 3177.972 kb on - strand, within MPMX26_03055at 3177.972 kb on - strand, within MPMX26_03055at 3177.972 kb on - strand, within MPMX26_03055at 3177.983 kb on - strand, within MPMX26_03055at 3178.006 kb on + strand, within MPMX26_03055at 3178.014 kb on - strand, within MPMX26_03055at 3178.014 kb on - strand, within MPMX26_03055at 3178.018 kb on - strand, within MPMX26_03055at 3178.038 kb on + strand, within MPMX26_03055at 3178.038 kb on + strand, within MPMX26_03055at 3178.046 kb on - strand, within MPMX26_03055at 3178.046 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.051 kb on - strand, within MPMX26_03055at 3178.070 kb on - strand, within MPMX26_03055at 3178.085 kb on - strand, within MPMX26_03055at 3178.085 kb on - strand, within MPMX26_03055at 3178.085 kb on - strand, within MPMX26_03055at 3178.095 kb on - strand, within MPMX26_03055at 3178.105 kb on - strand, within MPMX26_03055at 3178.105 kb on - strand, within MPMX26_03055at 3178.105 kb on - strand, within MPMX26_03055at 3178.114 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.115 kb on - strand, within MPMX26_03055at 3178.120 kb on - strand, within MPMX26_03055at 3178.129 kb on - strand, within MPMX26_03055at 3178.133 kb on - strand, within MPMX26_03055at 3178.173 kb on + strand, within MPMX26_03055at 3178.173 kb on + strand, within MPMX26_03055at 3178.176 kb on - strand, within MPMX26_03055at 3178.181 kb on - strand, within MPMX26_03055at 3178.186 kb on - strand, within MPMX26_03055at 3178.194 kb on - strand, within MPMX26_03055at 3178.196 kb on - strand, within MPMX26_03055at 3178.196 kb on - strand, within MPMX26_03055at 3178.196 kb on - strand, within MPMX26_03055at 3178.198 kb on - strand, within MPMX26_03055at 3178.201 kb on - strand, within MPMX26_03055at 3178.203 kb on - strand, within MPMX26_03055at 3178.228 kb on - strand, within MPMX26_03055at 3178.228 kb on - strand, within MPMX26_03055at 3178.369 kb on - strandat 3178.547 kb on - strandat 3178.796 kb on - strandat 3178.804 kb on + strandat 3178.866 kb on - strandat 3178.887 kb on + strandat 3178.906 kb on + strandat 3178.914 kb on - strandat 3179.179 kb on - strand, within MPMX26_03056at 3179.180 kb on - strand, within MPMX26_03056at 3179.180 kb on - strand, within MPMX26_03056at 3179.182 kb on - strand, within MPMX26_03056at 3179.182 kb on - strand, within MPMX26_03056at 3179.249 kb on - strand, within MPMX26_03056at 3179.249 kb on - strand, within MPMX26_03056at 3179.265 kb on + strand, within MPMX26_03056at 3179.273 kb on - strand, within MPMX26_03056at 3179.487 kb on - strand, within MPMX26_03056

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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3,176,069 + MPMX26_03054 0.73 +1.0
3,176,100 + MPMX26_03054 0.75 -0.1
3,176,114 + MPMX26_03054 0.76 +1.2
3,176,122 - MPMX26_03054 0.76 +0.4
3,176,122 - MPMX26_03054 0.76 -0.7
3,176,142 - MPMX26_03054 0.77 -0.3
3,176,142 - MPMX26_03054 0.77 -0.7
3,176,147 - MPMX26_03054 0.78 +0.6
3,176,254 - MPMX26_03054 0.84 -1.0
3,176,280 - MPMX26_03054 0.86 -0.5
3,176,438 + -0.5
3,176,438 + -0.2
3,176,513 + +0.9
3,176,519 + -0.4
3,176,519 + -0.0
3,176,524 + +0.4
3,176,547 - -0.4
3,176,677 - +0.1
3,176,683 - -0.4
3,176,710 - +0.4
3,176,720 - +1.6
3,176,760 - +0.5
3,176,767 + -0.0
3,176,775 - -0.2
3,176,775 - +0.4
3,176,824 - +0.4
3,176,824 - +0.2
3,176,835 + +0.6
3,176,848 - +0.3
3,176,848 - +0.2
3,176,848 - -0.2
3,176,848 - +0.6
3,176,848 - -0.3
3,176,962 + MPMX26_03055 0.15 -0.4
3,176,970 - MPMX26_03055 0.15 +0.3
3,176,984 + MPMX26_03055 0.16 +1.2
3,176,992 - MPMX26_03055 0.16 -0.4
3,176,994 + MPMX26_03055 0.17 +0.3
3,176,994 + MPMX26_03055 0.17 +0.0
3,177,002 - MPMX26_03055 0.17 +0.9
3,177,033 - MPMX26_03055 0.19 +0.6
3,177,099 - MPMX26_03055 0.22 -0.3
3,177,099 - MPMX26_03055 0.22 -0.2
3,177,111 - MPMX26_03055 0.23 -0.1
3,177,238 - MPMX26_03055 0.30 +1.9
3,177,238 - MPMX26_03055 0.30 -0.3
3,177,238 - MPMX26_03055 0.30 -0.5
3,177,273 + MPMX26_03055 0.32 -1.2
3,177,282 - MPMX26_03055 0.33 +1.0
3,177,512 + MPMX26_03055 0.45 +0.4
3,177,528 - MPMX26_03055 0.46 -0.5
3,177,550 - MPMX26_03055 0.47 -0.6
3,177,555 - MPMX26_03055 0.48 -1.4
3,177,559 - MPMX26_03055 0.48 -0.0
3,177,594 - MPMX26_03055 0.50 -0.3
3,177,607 - MPMX26_03055 0.51 -0.4
3,177,607 - MPMX26_03055 0.51 +0.2
3,177,607 - MPMX26_03055 0.51 -0.4
3,177,607 - MPMX26_03055 0.51 +0.5
3,177,612 - MPMX26_03055 0.51 -2.1
3,177,633 - MPMX26_03055 0.52 +0.4
3,177,670 - MPMX26_03055 0.54 +0.3
3,177,679 - MPMX26_03055 0.55 +0.2
3,177,679 - MPMX26_03055 0.55 -0.1
3,177,679 - MPMX26_03055 0.55 -1.3
3,177,679 - MPMX26_03055 0.55 -1.4
3,177,679 - MPMX26_03055 0.55 -0.0
3,177,679 - MPMX26_03055 0.55 -0.5
3,177,679 - MPMX26_03055 0.55 -0.5
3,177,679 - MPMX26_03055 0.55 +0.1
3,177,679 - MPMX26_03055 0.55 +0.8
3,177,679 - MPMX26_03055 0.55 -0.7
3,177,743 - MPMX26_03055 0.58 +1.9
3,177,745 - MPMX26_03055 0.58 -0.7
3,177,745 - MPMX26_03055 0.58 +0.9
3,177,745 - MPMX26_03055 0.58 +0.4
3,177,748 - MPMX26_03055 0.58 -0.2
3,177,748 - MPMX26_03055 0.58 -0.8
3,177,753 - MPMX26_03055 0.59 +1.1
3,177,753 - MPMX26_03055 0.59 +1.6
3,177,863 - MPMX26_03055 0.65 +0.8
3,177,894 - MPMX26_03055 0.67 +0.3
3,177,894 - MPMX26_03055 0.67 +0.0
3,177,949 - MPMX26_03055 0.70 +0.0
3,177,961 - MPMX26_03055 0.70 +0.2
3,177,961 - MPMX26_03055 0.70 -0.6
3,177,972 - MPMX26_03055 0.71 +0.2
3,177,972 - MPMX26_03055 0.71 +0.2
3,177,972 - MPMX26_03055 0.71 -0.0
3,177,972 - MPMX26_03055 0.71 +0.0
3,177,983 - MPMX26_03055 0.71 +0.2
3,178,006 + MPMX26_03055 0.73 -0.2
3,178,014 - MPMX26_03055 0.73 +0.0
3,178,014 - MPMX26_03055 0.73 -1.0
3,178,018 - MPMX26_03055 0.73 -0.1
3,178,038 + MPMX26_03055 0.74 -0.2
3,178,038 + MPMX26_03055 0.74 -1.0
3,178,046 - MPMX26_03055 0.75 -1.8
3,178,046 - MPMX26_03055 0.75 +0.0
3,178,051 - MPMX26_03055 0.75 -0.3
3,178,051 - MPMX26_03055 0.75 +0.0
3,178,051 - MPMX26_03055 0.75 +0.5
3,178,051 - MPMX26_03055 0.75 -0.7
3,178,051 - MPMX26_03055 0.75 +0.4
3,178,070 - MPMX26_03055 0.76 +0.3
3,178,085 - MPMX26_03055 0.77 +1.1
3,178,085 - MPMX26_03055 0.77 +0.4
3,178,085 - MPMX26_03055 0.77 -0.0
3,178,095 - MPMX26_03055 0.78 +0.2
3,178,105 - MPMX26_03055 0.78 +0.6
3,178,105 - MPMX26_03055 0.78 -0.7
3,178,105 - MPMX26_03055 0.78 +0.4
3,178,114 - MPMX26_03055 0.79 +0.3
3,178,115 - MPMX26_03055 0.79 -0.8
3,178,115 - MPMX26_03055 0.79 +1.3
3,178,115 - MPMX26_03055 0.79 -0.0
3,178,115 - MPMX26_03055 0.79 +1.4
3,178,115 - MPMX26_03055 0.79 -2.0
3,178,120 - MPMX26_03055 0.79 -1.5
3,178,129 - MPMX26_03055 0.80 +0.4
3,178,133 - MPMX26_03055 0.80 +0.0
3,178,173 + MPMX26_03055 0.82 +0.4
3,178,173 + MPMX26_03055 0.82 +1.0
3,178,176 - MPMX26_03055 0.82 -0.8
3,178,181 - MPMX26_03055 0.82 +1.0
3,178,186 - MPMX26_03055 0.83 -0.1
3,178,194 - MPMX26_03055 0.83 -0.3
3,178,196 - MPMX26_03055 0.83 +1.0
3,178,196 - MPMX26_03055 0.83 -0.0
3,178,196 - MPMX26_03055 0.83 +0.6
3,178,198 - MPMX26_03055 0.83 +0.2
3,178,201 - MPMX26_03055 0.84 +0.8
3,178,203 - MPMX26_03055 0.84 +0.2
3,178,228 - MPMX26_03055 0.85 -0.4
3,178,228 - MPMX26_03055 0.85 +0.9
3,178,369 - +2.4
3,178,547 - +0.1
3,178,796 - +0.5
3,178,804 + +2.0
3,178,866 - -0.0
3,178,887 + -0.2
3,178,906 + +0.2
3,178,914 - +1.0
3,179,179 - MPMX26_03056 0.26 +0.6
3,179,180 - MPMX26_03056 0.26 -0.2
3,179,180 - MPMX26_03056 0.26 +0.6
3,179,182 - MPMX26_03056 0.27 -1.2
3,179,182 - MPMX26_03056 0.27 -1.1
3,179,249 - MPMX26_03056 0.32 -0.1
3,179,249 - MPMX26_03056 0.32 +0.1
3,179,265 + MPMX26_03056 0.33 -1.0
3,179,273 - MPMX26_03056 0.33 -2.0
3,179,487 - MPMX26_03056 0.49 +0.2

Or see this region's nucleotide sequence