Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02583

Experiment: UV exposure at 150J/m2 for 20 seconds

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02582 and MPMX26_02583 are separated by 49 nucleotidesMPMX26_02583 and MPMX26_02584 are separated by 193 nucleotides MPMX26_02582: MPMX26_02582 - hypothetical protein, at 2,675,011 to 2,676,120 _02582 MPMX26_02583: MPMX26_02583 - hypothetical protein, at 2,676,170 to 2,677,003 _02583 MPMX26_02584: MPMX26_02584 - hypothetical protein, at 2,677,197 to 2,678,162 _02584 Position (kb) 2676 2677 2678Strain fitness (log2 ratio) -1 0 1at 2675.629 kb on - strand, within MPMX26_02582at 2676.819 kb on - strand, within MPMX26_02583at 2676.827 kb on - strand, within MPMX26_02583at 2677.232 kb on - strandat 2677.241 kb on - strandat 2677.252 kb on - strandat 2677.298 kb on - strand, within MPMX26_02584at 2677.308 kb on - strand, within MPMX26_02584at 2677.319 kb on - strand, within MPMX26_02584at 2677.332 kb on - strand, within MPMX26_02584at 2677.458 kb on - strand, within MPMX26_02584at 2677.458 kb on - strand, within MPMX26_02584at 2677.586 kb on - strand, within MPMX26_02584at 2677.656 kb on - strand, within MPMX26_02584at 2677.966 kb on - strand, within MPMX26_02584at 2677.966 kb on - strand, within MPMX26_02584

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Per-strain Table

Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds
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2,675,629 - MPMX26_02582 0.56 -0.2
2,676,819 - MPMX26_02583 0.78 -0.5
2,676,827 - MPMX26_02583 0.79 -0.7
2,677,232 - +0.5
2,677,241 - +0.4
2,677,252 - +1.2
2,677,298 - MPMX26_02584 0.10 -0.1
2,677,308 - MPMX26_02584 0.11 +0.3
2,677,319 - MPMX26_02584 0.13 -0.2
2,677,332 - MPMX26_02584 0.14 +0.7
2,677,458 - MPMX26_02584 0.27 -0.8
2,677,458 - MPMX26_02584 0.27 +0.5
2,677,586 - MPMX26_02584 0.40 -0.5
2,677,656 - MPMX26_02584 0.48 -0.5
2,677,966 - MPMX26_02584 0.80 -1.6
2,677,966 - MPMX26_02584 0.80 -0.4

Or see this region's nucleotide sequence