Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01704 and MPMX26_01705 are separated by 299 nucleotides MPMX26_01705 and MPMX26_01706 are separated by 76 nucleotides
MPMX26_01704: MPMX26_01704 - hypothetical protein, at 1,759,137 to 1,760,549
_01704
MPMX26_01705: MPMX26_01705 - Alpha-ketoglutarate permease, at 1,760,849 to 1,762,144
_01705
MPMX26_01706: MPMX26_01706 - Esterase YbfF, at 1,762,221 to 1,762,982
_01706
Position (kb) 1760
1761
1762
1763 Strain fitness (log2 ratio) -1
0
1 at 1760.452 kb on + strand at 1761.172 kb on + strand, within MPMX26_01705 at 1761.220 kb on + strand, within MPMX26_01705 at 1761.256 kb on + strand, within MPMX26_01705 at 1761.266 kb on + strand, within MPMX26_01705 at 1761.266 kb on + strand, within MPMX26_01705 at 1761.340 kb on + strand, within MPMX26_01705 at 1761.362 kb on + strand, within MPMX26_01705 at 1761.370 kb on + strand, within MPMX26_01705 at 1761.503 kb on + strand, within MPMX26_01705 at 1761.503 kb on + strand, within MPMX26_01705 at 1761.526 kb on + strand, within MPMX26_01705 at 1761.775 kb on + strand, within MPMX26_01705 at 1761.784 kb on + strand, within MPMX26_01705 at 1761.794 kb on + strand, within MPMX26_01705 at 1761.901 kb on + strand, within MPMX26_01705 at 1761.916 kb on + strand, within MPMX26_01705 at 1761.967 kb on + strand, within MPMX26_01705 at 1761.979 kb on + strand, within MPMX26_01705 at 1762.230 kb on - strand at 1762.262 kb on - strand at 1762.299 kb on - strand, within MPMX26_01706 at 1762.299 kb on - strand, within MPMX26_01706 at 1762.299 kb on - strand, within MPMX26_01706 at 1762.299 kb on - strand, within MPMX26_01706 at 1762.299 kb on - strand, within MPMX26_01706 at 1762.299 kb on - strand, within MPMX26_01706 at 1762.410 kb on - strand, within MPMX26_01706 at 1762.470 kb on - strand, within MPMX26_01706 at 1762.491 kb on - strand, within MPMX26_01706 at 1762.514 kb on - strand, within MPMX26_01706 at 1762.571 kb on - strand, within MPMX26_01706 at 1762.623 kb on - strand, within MPMX26_01706 at 1762.647 kb on - strand, within MPMX26_01706
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 1,760,452 + +0.7 1,761,172 + MPMX26_01705 0.25 +0.5 1,761,220 + MPMX26_01705 0.29 +0.1 1,761,256 + MPMX26_01705 0.31 -0.1 1,761,266 + MPMX26_01705 0.32 -0.0 1,761,266 + MPMX26_01705 0.32 -0.3 1,761,340 + MPMX26_01705 0.38 +0.4 1,761,362 + MPMX26_01705 0.40 +0.1 1,761,370 + MPMX26_01705 0.40 -0.8 1,761,503 + MPMX26_01705 0.50 -0.6 1,761,503 + MPMX26_01705 0.50 -0.9 1,761,526 + MPMX26_01705 0.52 -0.2 1,761,775 + MPMX26_01705 0.71 +0.6 1,761,784 + MPMX26_01705 0.72 +0.1 1,761,794 + MPMX26_01705 0.73 +0.1 1,761,901 + MPMX26_01705 0.81 +0.3 1,761,916 + MPMX26_01705 0.82 -0.3 1,761,967 + MPMX26_01705 0.86 -0.1 1,761,979 + MPMX26_01705 0.87 -0.6 1,762,230 - -0.3 1,762,262 - -0.5 1,762,299 - MPMX26_01706 0.10 -0.4 1,762,299 - MPMX26_01706 0.10 -0.2 1,762,299 - MPMX26_01706 0.10 -0.3 1,762,299 - MPMX26_01706 0.10 +0.1 1,762,299 - MPMX26_01706 0.10 +0.6 1,762,299 - MPMX26_01706 0.10 -0.2 1,762,410 - MPMX26_01706 0.25 -1.2 1,762,470 - MPMX26_01706 0.33 -0.2 1,762,491 - MPMX26_01706 0.35 -0.7 1,762,514 - MPMX26_01706 0.38 -0.3 1,762,571 - MPMX26_01706 0.46 -0.9 1,762,623 - MPMX26_01706 0.53 -0.4 1,762,647 - MPMX26_01706 0.56 -0.6
Or see this region's nucleotide sequence