Experiment: UV exposure at 150J/m2 for 20 seconds
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01154 and MPMX26_01155 are separated by 190 nucleotides MPMX26_01155 and MPMX26_01156 are separated by 8 nucleotides MPMX26_01156 and MPMX26_01157 are separated by 11 nucleotides MPMX26_01157 and MPMX26_01158 are separated by 210 nucleotides
MPMX26_01154: MPMX26_01154 - Replicative DNA helicase, at 1,221,770 to 1,223,215
_01154
MPMX26_01155: MPMX26_01155 - 50S ribosomal protein L9, at 1,223,406 to 1,223,852
_01155
MPMX26_01156: MPMX26_01156 - 30S ribosomal protein S18, at 1,223,861 to 1,224,088
_01156
MPMX26_01157: MPMX26_01157 - 30S ribosomal protein S6, at 1,224,100 to 1,224,486
_01157
MPMX26_01158: MPMX26_01158 - Protoheme IX farnesyltransferase, at 1,224,697 to 1,225,575
_01158
Position (kb) 1223
1224 Strain fitness (log2 ratio) -2
-1
0
1 at 1223.389 kb on - strand at 1223.445 kb on - strand at 1223.451 kb on - strand, within MPMX26_01155 at 1223.490 kb on - strand, within MPMX26_01155 at 1223.492 kb on - strand, within MPMX26_01155 at 1223.547 kb on - strand, within MPMX26_01155 at 1223.547 kb on - strand, within MPMX26_01155 at 1223.547 kb on - strand, within MPMX26_01155 at 1223.547 kb on - strand, within MPMX26_01155 at 1223.547 kb on - strand, within MPMX26_01155 at 1223.547 kb on - strand, within MPMX26_01155 at 1223.547 kb on - strand, within MPMX26_01155 at 1223.600 kb on - strand, within MPMX26_01155 at 1223.660 kb on - strand, within MPMX26_01155 at 1223.777 kb on - strand, within MPMX26_01155 at 1223.783 kb on - strand, within MPMX26_01155 at 1224.727 kb on - strand at 1224.766 kb on - strand at 1224.797 kb on + strand, within MPMX26_01158 at 1224.797 kb on + strand, within MPMX26_01158 at 1224.805 kb on - strand, within MPMX26_01158 at 1224.805 kb on - strand, within MPMX26_01158 at 1224.815 kb on - strand, within MPMX26_01158 at 1224.837 kb on - strand, within MPMX26_01158 at 1224.837 kb on - strand, within MPMX26_01158
Per-strain Table
Position Strand Gene LocusTag Fraction UV exposure at 150J/m2 for 20 seconds remove 1,223,389 - -2.5 1,223,445 - -1.3 1,223,451 - MPMX26_01155 0.10 +1.3 1,223,490 - MPMX26_01155 0.19 -0.6 1,223,492 - MPMX26_01155 0.19 -0.9 1,223,547 - MPMX26_01155 0.32 +0.1 1,223,547 - MPMX26_01155 0.32 -0.5 1,223,547 - MPMX26_01155 0.32 -1.1 1,223,547 - MPMX26_01155 0.32 +0.7 1,223,547 - MPMX26_01155 0.32 -0.6 1,223,547 - MPMX26_01155 0.32 -0.6 1,223,547 - MPMX26_01155 0.32 +0.1 1,223,600 - MPMX26_01155 0.43 -1.3 1,223,660 - MPMX26_01155 0.57 -0.6 1,223,777 - MPMX26_01155 0.83 -0.9 1,223,783 - MPMX26_01155 0.84 -1.5 1,224,727 - -0.6 1,224,766 - -1.1 1,224,797 + MPMX26_01158 0.11 -2.3 1,224,797 + MPMX26_01158 0.11 -0.3 1,224,805 - MPMX26_01158 0.12 -2.5 1,224,805 - MPMX26_01158 0.12 -0.9 1,224,815 - MPMX26_01158 0.13 -0.6 1,224,837 - MPMX26_01158 0.16 -0.5 1,224,837 - MPMX26_01158 0.16 -1.5
Or see this region's nucleotide sequence