Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03218 and MPMX19_03219 are separated by 186 nucleotides MPMX19_03219 and MPMX19_03220 are separated by 121 nucleotides MPMX19_03220 and MPMX19_03221 are separated by 8 nucleotides
MPMX19_03218: MPMX19_03218 - Haloalkane dehalogenase, at 517,694 to 518,767
_03218
MPMX19_03219: MPMX19_03219 - putative ABC transporter ATP-binding protein YheS, at 518,954 to 520,552
_03219
MPMX19_03220: MPMX19_03220 - hypothetical protein, at 520,674 to 521,312
_03220
MPMX19_03221: MPMX19_03221 - Adaptive-response sensory-kinase SasA, at 521,321 to 522,673
_03221
Position (kb) 518
519
520
521 Strain fitness (log2 ratio) -2
-1
0
1 at 517.959 kb on + strand, within MPMX19_03218 at 517.959 kb on + strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 517.960 kb on - strand, within MPMX19_03218 at 518.086 kb on + strand, within MPMX19_03218 at 518.087 kb on - strand, within MPMX19_03218 at 518.087 kb on - strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.088 kb on + strand, within MPMX19_03218 at 518.089 kb on - strand, within MPMX19_03218 at 518.127 kb on + strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.128 kb on - strand, within MPMX19_03218 at 518.131 kb on - strand, within MPMX19_03218 at 518.131 kb on - strand, within MPMX19_03218 at 518.136 kb on + strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.137 kb on - strand, within MPMX19_03218 at 518.203 kb on - strand, within MPMX19_03218 at 518.284 kb on - strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.469 kb on + strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.470 kb on - strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.484 kb on + strand, within MPMX19_03218 at 518.485 kb on - strand, within MPMX19_03218 at 518.485 kb on - strand, within MPMX19_03218 at 518.542 kb on - strand, within MPMX19_03218 at 518.542 kb on - strand, within MPMX19_03218 at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.769 kb on + strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.770 kb on - strand at 518.789 kb on + strand at 518.789 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.819 kb on + strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.820 kb on - strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.862 kb on + strand at 518.863 kb on - strand at 518.863 kb on - strand at 518.863 kb on - strand at 518.891 kb on + strand at 518.891 kb on + strand at 518.891 kb on + strand at 518.892 kb on - strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.955 kb on + strand at 518.956 kb on - strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.057 kb on + strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.058 kb on - strand at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.416 kb on + strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 519.417 kb on - strand, within MPMX19_03219 at 520.842 kb on + strand, within MPMX19_03220 at 520.984 kb on - strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.010 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.022 kb on + strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.023 kb on - strand, within MPMX19_03220 at 521.369 kb on + strand at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221 at 521.470 kb on - strand, within MPMX19_03221
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 517,959 + MPMX19_03218 0.25 -1.2 517,959 + MPMX19_03218 0.25 +0.0 517,960 - MPMX19_03218 0.25 +0.7 517,960 - MPMX19_03218 0.25 -0.2 517,960 - MPMX19_03218 0.25 -0.3 518,086 + MPMX19_03218 0.36 -1.2 518,087 - MPMX19_03218 0.37 +0.4 518,087 - MPMX19_03218 0.37 -0.3 518,088 + MPMX19_03218 0.37 -0.4 518,088 + MPMX19_03218 0.37 -0.4 518,088 + MPMX19_03218 0.37 -0.5 518,089 - MPMX19_03218 0.37 -0.4 518,127 + MPMX19_03218 0.40 +1.2 518,128 - MPMX19_03218 0.40 -0.6 518,128 - MPMX19_03218 0.40 -0.9 518,128 - MPMX19_03218 0.40 +0.8 518,131 - MPMX19_03218 0.41 -1.9 518,131 - MPMX19_03218 0.41 -1.6 518,136 + MPMX19_03218 0.41 +0.9 518,137 - MPMX19_03218 0.41 -2.5 518,137 - MPMX19_03218 0.41 -0.9 518,137 - MPMX19_03218 0.41 +0.3 518,203 - MPMX19_03218 0.47 +0.4 518,284 - MPMX19_03218 0.55 -0.3 518,469 + MPMX19_03218 0.72 +0.6 518,469 + MPMX19_03218 0.72 -1.1 518,469 + MPMX19_03218 0.72 +1.4 518,469 + MPMX19_03218 0.72 +0.4 518,469 + MPMX19_03218 0.72 +0.1 518,469 + MPMX19_03218 0.72 +0.4 518,469 + MPMX19_03218 0.72 -0.1 518,469 + MPMX19_03218 0.72 +0.1 518,469 + MPMX19_03218 0.72 -0.6 518,469 + MPMX19_03218 0.72 -1.3 518,469 + MPMX19_03218 0.72 +1.0 518,469 + MPMX19_03218 0.72 +0.8 518,469 + MPMX19_03218 0.72 +1.6 518,469 + MPMX19_03218 0.72 +1.6 518,469 + MPMX19_03218 0.72 -0.9 518,469 + MPMX19_03218 0.72 +0.6 518,469 + MPMX19_03218 0.72 -0.9 518,469 + MPMX19_03218 0.72 -0.5 518,469 + MPMX19_03218 0.72 -1.0 518,469 + MPMX19_03218 0.72 -1.9 518,469 + MPMX19_03218 0.72 +0.9 518,469 + MPMX19_03218 0.72 +1.6 518,469 + MPMX19_03218 0.72 -1.0 518,469 + MPMX19_03218 0.72 +0.6 518,469 + MPMX19_03218 0.72 -0.4 518,469 + MPMX19_03218 0.72 -0.6 518,469 + MPMX19_03218 0.72 -1.6 518,469 + MPMX19_03218 0.72 +0.1 518,470 - MPMX19_03218 0.72 -2.2 518,470 - MPMX19_03218 0.72 -1.2 518,470 - MPMX19_03218 0.72 -0.3 518,470 - MPMX19_03218 0.72 -1.9 518,470 - MPMX19_03218 0.72 +0.4 518,470 - MPMX19_03218 0.72 +1.4 518,470 - MPMX19_03218 0.72 -0.8 518,470 - MPMX19_03218 0.72 +0.2 518,470 - MPMX19_03218 0.72 -0.9 518,470 - MPMX19_03218 0.72 -1.4 518,470 - MPMX19_03218 0.72 +0.0 518,470 - MPMX19_03218 0.72 +0.3 518,470 - MPMX19_03218 0.72 -0.2 518,470 - MPMX19_03218 0.72 -0.6 518,470 - MPMX19_03218 0.72 -0.5 518,470 - MPMX19_03218 0.72 -1.4 518,470 - MPMX19_03218 0.72 -1.3 518,470 - MPMX19_03218 0.72 -0.4 518,470 - MPMX19_03218 0.72 -0.2 518,470 - MPMX19_03218 0.72 +0.4 518,470 - MPMX19_03218 0.72 -0.4 518,470 - MPMX19_03218 0.72 -1.9 518,470 - MPMX19_03218 0.72 +0.0 518,470 - MPMX19_03218 0.72 -0.3 518,470 - MPMX19_03218 0.72 -0.8 518,470 - MPMX19_03218 0.72 -0.6 518,470 - MPMX19_03218 0.72 -2.7 518,470 - MPMX19_03218 0.72 -0.0 518,484 + MPMX19_03218 0.74 -0.3 518,484 + MPMX19_03218 0.74 -0.2 518,484 + MPMX19_03218 0.74 +0.1 518,485 - MPMX19_03218 0.74 -1.9 518,485 - MPMX19_03218 0.74 -1.4 518,542 - MPMX19_03218 0.79 -0.1 518,542 - MPMX19_03218 0.79 +0.1 518,769 + -0.3 518,769 + -0.1 518,769 + -0.2 518,769 + -0.8 518,769 + -0.7 518,769 + +0.7 518,769 + +0.8 518,769 + -0.9 518,770 - -0.0 518,770 - -1.2 518,770 - -1.6 518,770 - +0.8 518,770 - +0.4 518,770 - -0.9 518,770 - -0.5 518,770 - +0.1 518,789 + +0.4 518,789 + +0.7 518,819 + -0.2 518,819 + -0.1 518,819 + +0.7 518,819 + +0.1 518,819 + -0.2 518,820 - +0.4 518,820 - +0.4 518,820 - -0.6 518,820 - -1.9 518,862 + +0.6 518,862 + -0.6 518,862 + -0.7 518,862 + -0.4 518,862 + -0.6 518,863 - -1.2 518,863 - -0.6 518,863 - -0.7 518,891 + -2.0 518,891 + -1.7 518,891 + +0.8 518,892 - +0.4 518,955 + -0.9 518,955 + -0.9 518,955 + +0.1 518,955 + +0.1 518,956 - -1.0 519,057 + -0.1 519,057 + -0.2 519,057 + -2.0 519,057 + +1.0 519,057 + +0.4 519,058 - +0.2 519,058 - -0.3 519,058 - -0.7 519,058 - +0.0 519,416 + MPMX19_03219 0.29 -0.2 519,416 + MPMX19_03219 0.29 -0.9 519,416 + MPMX19_03219 0.29 -1.6 519,416 + MPMX19_03219 0.29 +0.1 519,416 + MPMX19_03219 0.29 -0.9 519,416 + MPMX19_03219 0.29 -0.9 519,417 - MPMX19_03219 0.29 -0.3 519,417 - MPMX19_03219 0.29 -1.0 519,417 - MPMX19_03219 0.29 -1.3 519,417 - MPMX19_03219 0.29 +0.1 520,842 + MPMX19_03220 0.26 +0.2 520,984 - MPMX19_03220 0.49 -0.6 521,010 + MPMX19_03220 0.53 +1.2 521,010 + MPMX19_03220 0.53 -0.6 521,010 + MPMX19_03220 0.53 +0.4 521,010 + MPMX19_03220 0.53 -0.7 521,010 + MPMX19_03220 0.53 -0.0 521,010 + MPMX19_03220 0.53 -1.2 521,022 + MPMX19_03220 0.54 -1.0 521,022 + MPMX19_03220 0.54 +0.2 521,022 + MPMX19_03220 0.54 +0.7 521,022 + MPMX19_03220 0.54 -0.2 521,022 + MPMX19_03220 0.54 -0.3 521,022 + MPMX19_03220 0.54 -1.9 521,022 + MPMX19_03220 0.54 +0.4 521,023 - MPMX19_03220 0.55 +0.4 521,023 - MPMX19_03220 0.55 +0.8 521,023 - MPMX19_03220 0.55 -0.1 521,023 - MPMX19_03220 0.55 -1.6 521,023 - MPMX19_03220 0.55 +0.9 521,023 - MPMX19_03220 0.55 -0.6 521,023 - MPMX19_03220 0.55 -1.2 521,023 - MPMX19_03220 0.55 +1.4 521,023 - MPMX19_03220 0.55 -1.9 521,023 - MPMX19_03220 0.55 -0.3 521,023 - MPMX19_03220 0.55 +0.3 521,369 + +0.3 521,470 - MPMX19_03221 0.11 -0.2 521,470 - MPMX19_03221 0.11 -1.3 521,470 - MPMX19_03221 0.11 +0.4 521,470 - MPMX19_03221 0.11 -1.9
Or see this region's nucleotide sequence