Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00931 and MPMX19_00932 are separated by 254 nucleotides MPMX19_00932 and MPMX19_00933 overlap by 1 nucleotides MPMX19_00933 and MPMX19_00934 are separated by 49 nucleotides MPMX19_00934 and MPMX19_00935 are separated by 0 nucleotides
MPMX19_00931: MPMX19_00931 - Cyclopropane-fatty-acyl-phospholipid synthase, at 968,596 to 969,864
_00931
MPMX19_00932: MPMX19_00932 - 50S ribosomal protein L9, at 970,119 to 970,682
_00932
MPMX19_00933: MPMX19_00933 - hypothetical protein, at 970,682 to 971,641
_00933
MPMX19_00934: MPMX19_00934 - 30S ribosomal protein S18, at 971,691 to 971,960
_00934
MPMX19_00935: MPMX19_00935 - 30S ribosomal protein S6, at 971,961 to 972,401
_00935
Position (kb) 970
971
972 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 969.684 kb on + strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.684 kb on + strand, within MPMX19_00931 at 969.685 kb on - strand, within MPMX19_00931 at 969.685 kb on - strand, within MPMX19_00931 at 969.685 kb on - strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.686 kb on + strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.687 kb on - strand, within MPMX19_00931 at 969.966 kb on + strand at 969.967 kb on - strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.978 kb on + strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 969.979 kb on - strand at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.804 kb on - strand, within MPMX19_00933 at 970.851 kb on - strand, within MPMX19_00933 at 971.401 kb on - strand, within MPMX19_00933 at 972.575 kb on - strand at 972.585 kb on + strand at 972.585 kb on + strand at 972.586 kb on - strand at 972.586 kb on - strand at 972.586 kb on - strand at 972.586 kb on - strand at 972.586 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 969,684 + MPMX19_00931 0.86 +0.4 969,684 + MPMX19_00931 0.86 -0.0 969,684 + MPMX19_00931 0.86 -0.4 969,684 + MPMX19_00931 0.86 +0.9 969,684 + MPMX19_00931 0.86 +0.1 969,685 - MPMX19_00931 0.86 -0.8 969,685 - MPMX19_00931 0.86 +0.4 969,685 - MPMX19_00931 0.86 +0.2 969,686 + MPMX19_00931 0.86 +0.8 969,686 + MPMX19_00931 0.86 +0.4 969,686 + MPMX19_00931 0.86 -0.1 969,686 + MPMX19_00931 0.86 +1.2 969,686 + MPMX19_00931 0.86 +1.0 969,686 + MPMX19_00931 0.86 +1.1 969,686 + MPMX19_00931 0.86 -1.4 969,686 + MPMX19_00931 0.86 -2.2 969,686 + MPMX19_00931 0.86 +0.9 969,686 + MPMX19_00931 0.86 +2.7 969,686 + MPMX19_00931 0.86 -2.8 969,686 + MPMX19_00931 0.86 -1.6 969,686 + MPMX19_00931 0.86 -0.2 969,686 + MPMX19_00931 0.86 -0.2 969,686 + MPMX19_00931 0.86 +0.4 969,687 - MPMX19_00931 0.86 -0.4 969,687 - MPMX19_00931 0.86 -0.3 969,687 - MPMX19_00931 0.86 +0.2 969,687 - MPMX19_00931 0.86 -1.4 969,687 - MPMX19_00931 0.86 -0.8 969,687 - MPMX19_00931 0.86 -1.4 969,687 - MPMX19_00931 0.86 -1.2 969,687 - MPMX19_00931 0.86 +0.4 969,687 - MPMX19_00931 0.86 -1.4 969,687 - MPMX19_00931 0.86 -1.2 969,687 - MPMX19_00931 0.86 -2.4 969,687 - MPMX19_00931 0.86 -1.9 969,687 - MPMX19_00931 0.86 -1.2 969,687 - MPMX19_00931 0.86 -0.2 969,687 - MPMX19_00931 0.86 +1.0 969,687 - MPMX19_00931 0.86 -1.6 969,687 - MPMX19_00931 0.86 -1.0 969,687 - MPMX19_00931 0.86 +1.8 969,687 - MPMX19_00931 0.86 -0.5 969,687 - MPMX19_00931 0.86 +0.4 969,687 - MPMX19_00931 0.86 +0.4 969,966 + +0.1 969,967 - -0.2 969,978 + -0.1 969,978 + -0.7 969,978 + -0.2 969,978 + +0.2 969,978 + -0.3 969,978 + -1.8 969,978 + +0.1 969,978 + -0.9 969,978 + -0.4 969,978 + -1.9 969,979 - -0.8 969,979 - -0.8 969,979 - -0.6 969,979 - -0.3 969,979 - -1.6 969,979 - -0.2 969,979 - -1.0 969,979 - +0.2 969,979 - -1.0 970,804 - MPMX19_00933 0.13 +1.4 970,804 - MPMX19_00933 0.13 +0.9 970,804 - MPMX19_00933 0.13 -0.3 970,804 - MPMX19_00933 0.13 +0.4 970,804 - MPMX19_00933 0.13 -0.4 970,804 - MPMX19_00933 0.13 +2.7 970,804 - MPMX19_00933 0.13 +1.0 970,804 - MPMX19_00933 0.13 -1.2 970,804 - MPMX19_00933 0.13 +0.8 970,804 - MPMX19_00933 0.13 -0.4 970,851 - MPMX19_00933 0.18 -0.6 971,401 - MPMX19_00933 0.75 +2.7 972,575 - -0.6 972,585 + -0.2 972,585 + -1.9 972,586 - +2.0 972,586 - -1.0 972,586 - -0.4 972,586 - +0.6 972,586 - +0.6
Or see this region's nucleotide sequence