Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00834 and MPMX19_00835 overlap by 4 nucleotides MPMX19_00835 and MPMX19_00836 are separated by 90 nucleotides MPMX19_00836 and MPMX19_00837 are separated by 266 nucleotides
MPMX19_00834: MPMX19_00834 - Chaperone SurA, at 865,914 to 867,374
_00834
MPMX19_00835: MPMX19_00835 - D-erythronate 4-phosphate dehydrogenase, at 867,371 to 868,399
_00835
MPMX19_00836: MPMX19_00836 - hypothetical protein, at 868,490 to 869,131
_00836
MPMX19_00837: MPMX19_00837 - DNA-directed RNA polymerase subunit omega, at 869,398 to 869,832
_00837
Position (kb) 867
868
869 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 867.770 kb on + strand, within MPMX19_00835 at 867.770 kb on + strand, within MPMX19_00835 at 867.770 kb on + strand, within MPMX19_00835 at 867.770 kb on + strand, within MPMX19_00835 at 867.770 kb on + strand, within MPMX19_00835 at 867.770 kb on + strand, within MPMX19_00835 at 867.770 kb on + strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.771 kb on - strand, within MPMX19_00835 at 867.806 kb on + strand, within MPMX19_00835 at 867.807 kb on - strand, within MPMX19_00835 at 867.807 kb on - strand, within MPMX19_00835 at 867.807 kb on - strand, within MPMX19_00835 at 868.166 kb on + strand, within MPMX19_00835 at 868.167 kb on - strand, within MPMX19_00835 at 868.167 kb on - strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.187 kb on + strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.188 kb on - strand, within MPMX19_00835 at 868.397 kb on + strand at 868.397 kb on + strand at 868.397 kb on + strand at 868.397 kb on + strand at 868.398 kb on - strand at 868.398 kb on - strand at 868.398 kb on - strand at 868.408 kb on + strand at 868.409 kb on - strand at 868.409 kb on - strand at 868.409 kb on - strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.512 kb on + strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.513 kb on - strand at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.799 kb on + strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.800 kb on - strand, within MPMX19_00836 at 868.876 kb on - strand, within MPMX19_00836 at 868.876 kb on - strand, within MPMX19_00836 at 868.876 kb on - strand, within MPMX19_00836 at 868.876 kb on - strand, within MPMX19_00836 at 868.882 kb on + strand, within MPMX19_00836 at 868.884 kb on + strand, within MPMX19_00836 at 868.884 kb on + strand, within MPMX19_00836 at 868.885 kb on - strand, within MPMX19_00836 at 868.885 kb on - strand, within MPMX19_00836 at 868.885 kb on - strand, within MPMX19_00836 at 868.885 kb on - strand, within MPMX19_00836 at 868.885 kb on - strand, within MPMX19_00836 at 868.885 kb on - strand, within MPMX19_00836 at 868.885 kb on - strand, within MPMX19_00836 at 868.920 kb on + strand, within MPMX19_00836 at 868.920 kb on + strand, within MPMX19_00836 at 868.920 kb on + strand, within MPMX19_00836 at 868.920 kb on + strand, within MPMX19_00836 at 868.920 kb on + strand, within MPMX19_00836 at 868.921 kb on - strand, within MPMX19_00836 at 868.921 kb on - strand, within MPMX19_00836 at 868.921 kb on - strand, within MPMX19_00836 at 868.921 kb on - strand, within MPMX19_00836 at 868.947 kb on + strand, within MPMX19_00836 at 868.947 kb on + strand, within MPMX19_00836 at 868.947 kb on + strand, within MPMX19_00836 at 868.947 kb on + strand, within MPMX19_00836 at 868.947 kb on + strand, within MPMX19_00836 at 868.948 kb on - strand, within MPMX19_00836 at 868.948 kb on - strand, within MPMX19_00836 at 868.948 kb on - strand, within MPMX19_00836 at 868.948 kb on - strand, within MPMX19_00836 at 868.950 kb on + strand, within MPMX19_00836 at 868.950 kb on + strand, within MPMX19_00836 at 868.950 kb on + strand, within MPMX19_00836 at 868.950 kb on + strand, within MPMX19_00836 at 868.951 kb on - strand, within MPMX19_00836 at 868.951 kb on - strand, within MPMX19_00836 at 868.951 kb on - strand, within MPMX19_00836 at 868.951 kb on - strand, within MPMX19_00836 at 869.004 kb on + strand, within MPMX19_00836 at 869.167 kb on + strand at 869.168 kb on - strand at 869.209 kb on + strand at 869.209 kb on + strand at 869.210 kb on - strand at 869.214 kb on + strand at 869.214 kb on + strand at 869.214 kb on + strand at 869.215 kb on - strand at 869.215 kb on - strand at 869.215 kb on - strand at 869.215 kb on - strand at 869.215 kb on - strand at 869.215 kb on - strand at 869.215 kb on - strand at 869.229 kb on + strand at 869.229 kb on + strand at 869.229 kb on + strand at 869.229 kb on + strand at 869.229 kb on + strand at 869.229 kb on + strand at 869.230 kb on - strand at 869.230 kb on - strand at 869.230 kb on - strand at 869.230 kb on - strand at 869.230 kb on - strand at 869.230 kb on - strand at 869.249 kb on + strand at 869.249 kb on + strand at 869.249 kb on + strand at 869.250 kb on - strand at 869.250 kb on - strand at 869.250 kb on - strand at 869.277 kb on + strand at 869.358 kb on + strand at 869.358 kb on + strand at 869.358 kb on + strand at 869.358 kb on + strand at 869.365 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 867,770 + MPMX19_00835 0.39 -2.1 867,770 + MPMX19_00835 0.39 -0.6 867,770 + MPMX19_00835 0.39 -2.2 867,770 + MPMX19_00835 0.39 +0.1 867,770 + MPMX19_00835 0.39 -2.2 867,770 + MPMX19_00835 0.39 +0.4 867,770 + MPMX19_00835 0.39 +0.4 867,771 - MPMX19_00835 0.39 +0.7 867,771 - MPMX19_00835 0.39 -0.6 867,771 - MPMX19_00835 0.39 -0.3 867,771 - MPMX19_00835 0.39 -1.8 867,771 - MPMX19_00835 0.39 +0.9 867,771 - MPMX19_00835 0.39 -0.9 867,771 - MPMX19_00835 0.39 -2.6 867,771 - MPMX19_00835 0.39 -1.4 867,771 - MPMX19_00835 0.39 +0.4 867,806 + MPMX19_00835 0.42 +0.8 867,807 - MPMX19_00835 0.42 +0.7 867,807 - MPMX19_00835 0.42 -0.5 867,807 - MPMX19_00835 0.42 +0.4 868,166 + MPMX19_00835 0.77 -1.2 868,167 - MPMX19_00835 0.77 -2.4 868,167 - MPMX19_00835 0.77 +0.7 868,187 + MPMX19_00835 0.79 +0.8 868,187 + MPMX19_00835 0.79 -1.3 868,187 + MPMX19_00835 0.79 -3.1 868,187 + MPMX19_00835 0.79 -0.5 868,187 + MPMX19_00835 0.79 -3.1 868,187 + MPMX19_00835 0.79 -2.4 868,187 + MPMX19_00835 0.79 -0.2 868,187 + MPMX19_00835 0.79 -0.9 868,187 + MPMX19_00835 0.79 -0.3 868,187 + MPMX19_00835 0.79 +1.2 868,187 + MPMX19_00835 0.79 +0.6 868,187 + MPMX19_00835 0.79 -0.9 868,187 + MPMX19_00835 0.79 -0.3 868,187 + MPMX19_00835 0.79 -0.3 868,187 + MPMX19_00835 0.79 -0.5 868,187 + MPMX19_00835 0.79 +0.4 868,187 + MPMX19_00835 0.79 +1.4 868,187 + MPMX19_00835 0.79 -0.0 868,188 - MPMX19_00835 0.79 -1.2 868,188 - MPMX19_00835 0.79 -0.6 868,188 - MPMX19_00835 0.79 -1.3 868,188 - MPMX19_00835 0.79 -0.4 868,188 - MPMX19_00835 0.79 -1.0 868,188 - MPMX19_00835 0.79 -0.7 868,188 - MPMX19_00835 0.79 -2.6 868,188 - MPMX19_00835 0.79 -1.5 868,188 - MPMX19_00835 0.79 -0.6 868,188 - MPMX19_00835 0.79 -1.6 868,397 + -0.3 868,397 + -0.8 868,397 + -1.9 868,397 + -0.6 868,398 - +0.6 868,398 - -0.6 868,398 - -0.2 868,408 + +0.8 868,409 - +0.2 868,409 - -0.2 868,409 - +1.5 868,512 + +0.7 868,512 + -0.0 868,512 + -1.1 868,512 + -0.4 868,512 + -2.2 868,512 + +0.4 868,512 + +1.0 868,512 + -0.3 868,512 + -1.0 868,512 + -1.0 868,512 + +0.1 868,512 + -0.8 868,512 + -0.5 868,512 + -1.2 868,512 + +0.1 868,512 + -0.4 868,512 + +0.6 868,512 + +1.0 868,512 + -1.0 868,512 + +1.2 868,513 - +0.2 868,513 - -0.8 868,513 - -2.4 868,513 - -0.0 868,513 - -1.0 868,513 - -0.3 868,513 - -2.2 868,513 - -0.6 868,513 - -0.3 868,513 - +0.8 868,513 - -1.6 868,513 - +2.2 868,513 - -0.3 868,513 - +0.1 868,513 - +0.6 868,513 - -0.4 868,799 + MPMX19_00836 0.48 -2.4 868,799 + MPMX19_00836 0.48 -0.0 868,799 + MPMX19_00836 0.48 -0.9 868,799 + MPMX19_00836 0.48 -1.2 868,799 + MPMX19_00836 0.48 -0.3 868,799 + MPMX19_00836 0.48 -0.5 868,799 + MPMX19_00836 0.48 +0.4 868,799 + MPMX19_00836 0.48 +1.7 868,799 + MPMX19_00836 0.48 -1.1 868,799 + MPMX19_00836 0.48 +0.6 868,799 + MPMX19_00836 0.48 -0.1 868,799 + MPMX19_00836 0.48 -2.2 868,800 - MPMX19_00836 0.48 -0.2 868,800 - MPMX19_00836 0.48 -0.6 868,800 - MPMX19_00836 0.48 +0.4 868,800 - MPMX19_00836 0.48 -0.9 868,800 - MPMX19_00836 0.48 -0.4 868,800 - MPMX19_00836 0.48 -0.1 868,800 - MPMX19_00836 0.48 +1.4 868,800 - MPMX19_00836 0.48 -0.3 868,800 - MPMX19_00836 0.48 -1.6 868,800 - MPMX19_00836 0.48 +0.4 868,800 - MPMX19_00836 0.48 -0.5 868,800 - MPMX19_00836 0.48 -0.6 868,800 - MPMX19_00836 0.48 -1.1 868,800 - MPMX19_00836 0.48 -0.2 868,800 - MPMX19_00836 0.48 -0.2 868,876 - MPMX19_00836 0.60 +0.4 868,876 - MPMX19_00836 0.60 -0.2 868,876 - MPMX19_00836 0.60 -0.3 868,876 - MPMX19_00836 0.60 -0.3 868,882 + MPMX19_00836 0.61 +0.4 868,884 + MPMX19_00836 0.61 +0.2 868,884 + MPMX19_00836 0.61 +0.2 868,885 - MPMX19_00836 0.62 -0.1 868,885 - MPMX19_00836 0.62 -0.6 868,885 - MPMX19_00836 0.62 -1.8 868,885 - MPMX19_00836 0.62 -0.6 868,885 - MPMX19_00836 0.62 +0.8 868,885 - MPMX19_00836 0.62 +1.1 868,885 - MPMX19_00836 0.62 -0.3 868,920 + MPMX19_00836 0.67 -1.2 868,920 + MPMX19_00836 0.67 +1.1 868,920 + MPMX19_00836 0.67 -0.8 868,920 + MPMX19_00836 0.67 +1.0 868,920 + MPMX19_00836 0.67 +0.2 868,921 - MPMX19_00836 0.67 -0.3 868,921 - MPMX19_00836 0.67 +0.2 868,921 - MPMX19_00836 0.67 +0.4 868,921 - MPMX19_00836 0.67 +0.8 868,947 + MPMX19_00836 0.71 +0.2 868,947 + MPMX19_00836 0.71 -1.6 868,947 + MPMX19_00836 0.71 -0.0 868,947 + MPMX19_00836 0.71 +0.4 868,947 + MPMX19_00836 0.71 -0.7 868,948 - MPMX19_00836 0.71 -0.6 868,948 - MPMX19_00836 0.71 +1.0 868,948 - MPMX19_00836 0.71 +0.6 868,948 - MPMX19_00836 0.71 -0.6 868,950 + MPMX19_00836 0.72 -0.9 868,950 + MPMX19_00836 0.72 -0.5 868,950 + MPMX19_00836 0.72 -1.0 868,950 + MPMX19_00836 0.72 +0.1 868,951 - MPMX19_00836 0.72 +0.4 868,951 - MPMX19_00836 0.72 -1.2 868,951 - MPMX19_00836 0.72 +0.1 868,951 - MPMX19_00836 0.72 -0.9 869,004 + MPMX19_00836 0.80 -0.6 869,167 + -0.4 869,168 - -1.2 869,209 + +0.1 869,209 + -0.0 869,210 - -0.9 869,214 + -0.9 869,214 + -0.6 869,214 + -1.2 869,215 - -0.8 869,215 - -0.4 869,215 - -0.7 869,215 - -1.0 869,215 - +1.8 869,215 - +0.2 869,215 - -1.3 869,229 + -0.4 869,229 + +0.4 869,229 + +0.9 869,229 + +0.7 869,229 + +0.4 869,229 + -0.1 869,230 - -0.7 869,230 - -0.5 869,230 - -0.2 869,230 - -0.9 869,230 - -0.0 869,230 - -2.8 869,249 + +1.0 869,249 + -0.1 869,249 + +0.7 869,250 - -1.6 869,250 - -0.5 869,250 - -1.6 869,277 + -0.0 869,358 + -0.7 869,358 + -0.9 869,358 + +1.4 869,358 + -0.2 869,365 + -0.9
Or see this region's nucleotide sequence