Experiment: NLN
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00476 and MPMX19_00477 are separated by 191 nucleotides MPMX19_00477 and MPMX19_00478 are separated by 86 nucleotides MPMX19_00478 and MPMX19_00479 are separated by 162 nucleotides
MPMX19_00476: MPMX19_00476 - Protein RarD, at 474,228 to 475,154
_00476
MPMX19_00477: MPMX19_00477 - Glutaredoxin 4, at 475,346 to 475,681
_00477
MPMX19_00478: MPMX19_00478 - putative protein RP812, at 475,768 to 476,007
_00478
MPMX19_00479: MPMX19_00479 - Adenylosuccinate lyase, at 476,170 to 477,465
_00479
Position (kb) 475
476
477 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.811 kb on + strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 474.812 kb on - strand, within MPMX19_00476 at 475.081 kb on + strand at 475.081 kb on + strand at 475.081 kb on + strand at 475.081 kb on + strand at 475.081 kb on + strand at 475.081 kb on + strand at 475.081 kb on + strand at 475.081 kb on + strand at 475.082 kb on - strand at 475.082 kb on - strand at 475.082 kb on - strand at 475.082 kb on - strand at 475.082 kb on - strand at 475.082 kb on - strand at 475.082 kb on - strand at 475.082 kb on - strand at 475.154 kb on + strand at 475.155 kb on - strand at 475.165 kb on + strand at 475.165 kb on + strand at 475.166 kb on - strand at 475.166 kb on - strand at 475.845 kb on - strand, within MPMX19_00478 at 475.845 kb on - strand, within MPMX19_00478 at 475.845 kb on - strand, within MPMX19_00478 at 475.845 kb on - strand, within MPMX19_00478 at 475.845 kb on - strand, within MPMX19_00478 at 475.911 kb on - strand, within MPMX19_00478 at 475.911 kb on - strand, within MPMX19_00478 at 476.057 kb on - strand at 476.057 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.065 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.070 kb on - strand at 476.172 kb on - strand at 476.172 kb on - strand at 476.172 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NLN remove 474,811 + MPMX19_00476 0.63 -0.7 474,811 + MPMX19_00476 0.63 -0.6 474,811 + MPMX19_00476 0.63 -1.6 474,811 + MPMX19_00476 0.63 +0.9 474,811 + MPMX19_00476 0.63 +0.8 474,811 + MPMX19_00476 0.63 -1.2 474,811 + MPMX19_00476 0.63 +0.4 474,811 + MPMX19_00476 0.63 +1.4 474,811 + MPMX19_00476 0.63 -0.4 474,811 + MPMX19_00476 0.63 +0.7 474,812 - MPMX19_00476 0.63 -1.1 474,812 - MPMX19_00476 0.63 -0.0 474,812 - MPMX19_00476 0.63 -0.7 474,812 - MPMX19_00476 0.63 -0.9 474,812 - MPMX19_00476 0.63 -1.4 474,812 - MPMX19_00476 0.63 -1.4 474,812 - MPMX19_00476 0.63 -0.4 474,812 - MPMX19_00476 0.63 +1.1 474,812 - MPMX19_00476 0.63 +1.6 474,812 - MPMX19_00476 0.63 +0.7 475,081 + -3.1 475,081 + -0.6 475,081 + +0.3 475,081 + -0.5 475,081 + -2.3 475,081 + -1.2 475,081 + +1.8 475,081 + -0.9 475,082 - +1.0 475,082 - +1.1 475,082 - +1.0 475,082 - -0.2 475,082 - -1.1 475,082 - -0.3 475,082 - -0.4 475,082 - -1.2 475,154 + -0.6 475,155 - -0.6 475,165 + -0.0 475,165 + -0.8 475,166 - -0.0 475,166 - -0.1 475,845 - MPMX19_00478 0.32 -1.6 475,845 - MPMX19_00478 0.32 -0.8 475,845 - MPMX19_00478 0.32 +0.4 475,845 - MPMX19_00478 0.32 +1.4 475,845 - MPMX19_00478 0.32 -2.2 475,911 - MPMX19_00478 0.60 -2.1 475,911 - MPMX19_00478 0.60 +1.4 476,057 - -1.2 476,057 - -0.2 476,065 - -0.6 476,065 - -1.8 476,065 - +0.1 476,065 - -2.1 476,065 - +0.6 476,065 - -1.0 476,065 - +0.7 476,065 - +0.2 476,065 - -1.0 476,065 - +0.6 476,065 - -0.6 476,065 - +0.1 476,065 - -1.8 476,065 - -0.3 476,065 - +0.4 476,065 - -0.3 476,070 - -0.3 476,070 - -1.5 476,070 - -1.5 476,070 - -0.0 476,070 - -0.7 476,070 - +0.4 476,070 - -0.3 476,070 - +0.7 476,070 - +1.2 476,070 - +0.7 476,070 - -1.2 476,070 - +0.4 476,070 - -1.2 476,070 - -0.0 476,070 - -0.6 476,070 - +1.0 476,070 - -0.2 476,070 - -0.2 476,070 - +0.6 476,172 - -0.9 476,172 - -0.6 476,172 - -1.2
Or see this region's nucleotide sequence