Experiment: WM_Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yceG and pabC are separated by 2 nucleotides pabC and fabF are separated by 119 nucleotides
MCAODC_22915: yceG - cell division protein YceG, at 1,326,250 to 1,327,272
yceG
MCAODC_22920: pabC - aminodeoxychorismate lyase, at 1,327,275 to 1,328,084
pabC
MCAODC_22925: fabF - beta-ketoacyl-ACP synthase II, at 1,328,204 to 1,329,445
fabF
Position (kb) 1327
1328
1329 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1326.285 kb on - strand at 1326.325 kb on - strand at 1326.418 kb on - strand, within yceG at 1326.418 kb on - strand, within yceG at 1326.422 kb on - strand, within yceG at 1326.451 kb on - strand, within yceG at 1326.451 kb on - strand, within yceG at 1326.453 kb on - strand, within yceG at 1326.453 kb on - strand, within yceG at 1326.453 kb on - strand, within yceG at 1326.453 kb on - strand, within yceG at 1326.453 kb on - strand, within yceG at 1326.453 kb on - strand, within yceG at 1326.462 kb on - strand, within yceG at 1326.462 kb on - strand, within yceG at 1326.462 kb on - strand, within yceG at 1326.507 kb on - strand, within yceG at 1326.507 kb on - strand, within yceG at 1326.507 kb on - strand, within yceG at 1326.556 kb on - strand, within yceG at 1326.556 kb on - strand, within yceG at 1326.667 kb on - strand, within yceG at 1326.667 kb on - strand, within yceG at 1326.770 kb on + strand, within yceG at 1326.770 kb on + strand, within yceG at 1326.770 kb on + strand, within yceG at 1326.770 kb on + strand, within yceG at 1326.771 kb on - strand, within yceG at 1326.771 kb on - strand, within yceG at 1326.771 kb on - strand, within yceG at 1326.848 kb on + strand, within yceG at 1326.849 kb on - strand, within yceG at 1326.879 kb on - strand, within yceG at 1326.879 kb on - strand, within yceG at 1327.005 kb on + strand, within yceG at 1327.312 kb on + strand at 1327.312 kb on + strand at 1327.313 kb on - strand at 1327.313 kb on - strand at 1327.313 kb on - strand at 1327.314 kb on + strand at 1327.314 kb on + strand at 1327.379 kb on + strand, within pabC at 1327.484 kb on + strand, within pabC at 1327.527 kb on + strand, within pabC at 1327.527 kb on + strand, within pabC at 1327.528 kb on - strand, within pabC at 1327.528 kb on - strand, within pabC at 1327.528 kb on - strand, within pabC at 1327.528 kb on - strand, within pabC at 1327.659 kb on - strand, within pabC at 1327.668 kb on - strand, within pabC at 1327.947 kb on + strand, within pabC at 1328.063 kb on + strand at 1328.064 kb on - strand at 1328.064 kb on - strand at 1328.077 kb on - strand at 1328.077 kb on - strand at 1328.206 kb on - strand at 1328.393 kb on - strand, within fabF at 1328.727 kb on - strand, within fabF
Per-strain Table
Position Strand Gene LocusTag Fraction WM_Bas09 remove 1,326,285 - -0.6 1,326,325 - -0.5 1,326,418 - yceG MCAODC_22915 0.16 +0.4 1,326,418 - yceG MCAODC_22915 0.16 -0.3 1,326,422 - yceG MCAODC_22915 0.17 +2.7 1,326,451 - yceG MCAODC_22915 0.20 -0.3 1,326,451 - yceG MCAODC_22915 0.20 -1.5 1,326,453 - yceG MCAODC_22915 0.20 -0.7 1,326,453 - yceG MCAODC_22915 0.20 +0.1 1,326,453 - yceG MCAODC_22915 0.20 +1.9 1,326,453 - yceG MCAODC_22915 0.20 +1.7 1,326,453 - yceG MCAODC_22915 0.20 +0.3 1,326,453 - yceG MCAODC_22915 0.20 +2.3 1,326,462 - yceG MCAODC_22915 0.21 -3.0 1,326,462 - yceG MCAODC_22915 0.21 +0.3 1,326,462 - yceG MCAODC_22915 0.21 +2.5 1,326,507 - yceG MCAODC_22915 0.25 -1.9 1,326,507 - yceG MCAODC_22915 0.25 -0.4 1,326,507 - yceG MCAODC_22915 0.25 -2.3 1,326,556 - yceG MCAODC_22915 0.30 +1.6 1,326,556 - yceG MCAODC_22915 0.30 -1.1 1,326,667 - yceG MCAODC_22915 0.41 -0.4 1,326,667 - yceG MCAODC_22915 0.41 +1.6 1,326,770 + yceG MCAODC_22915 0.51 +2.3 1,326,770 + yceG MCAODC_22915 0.51 +3.1 1,326,770 + yceG MCAODC_22915 0.51 +0.3 1,326,770 + yceG MCAODC_22915 0.51 -0.7 1,326,771 - yceG MCAODC_22915 0.51 +0.7 1,326,771 - yceG MCAODC_22915 0.51 -1.5 1,326,771 - yceG MCAODC_22915 0.51 -2.5 1,326,848 + yceG MCAODC_22915 0.58 +1.2 1,326,849 - yceG MCAODC_22915 0.59 +1.6 1,326,879 - yceG MCAODC_22915 0.61 -1.3 1,326,879 - yceG MCAODC_22915 0.61 -1.2 1,327,005 + yceG MCAODC_22915 0.74 +1.2 1,327,312 + -1.3 1,327,312 + -1.7 1,327,313 - +2.1 1,327,313 - +1.0 1,327,313 - -1.3 1,327,314 + +0.6 1,327,314 + -0.9 1,327,379 + pabC MCAODC_22920 0.13 -1.0 1,327,484 + pabC MCAODC_22920 0.26 +0.6 1,327,527 + pabC MCAODC_22920 0.31 +0.7 1,327,527 + pabC MCAODC_22920 0.31 -3.0 1,327,528 - pabC MCAODC_22920 0.31 +1.5 1,327,528 - pabC MCAODC_22920 0.31 -1.4 1,327,528 - pabC MCAODC_22920 0.31 -0.4 1,327,528 - pabC MCAODC_22920 0.31 -2.0 1,327,659 - pabC MCAODC_22920 0.47 +1.0 1,327,668 - pabC MCAODC_22920 0.49 +0.9 1,327,947 + pabC MCAODC_22920 0.83 +0.7 1,328,063 + +0.6 1,328,064 - +0.4 1,328,064 - -1.1 1,328,077 - -1.0 1,328,077 - +0.4 1,328,206 - +0.3 1,328,393 - fabF MCAODC_22925 0.15 -2.5 1,328,727 - fabF MCAODC_22925 0.42 -2.8
Or see this region's nucleotide sequence