Strain Fitness in Escherichia coli ECRC101 around MCAODC_17810

Experiment: WM_Bas09

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	WM_Bas09
425,171	+				-1.1
425,230	-				+1.9
425,230	-				+0.1
425,281	-				+1.7
425,564	+	uidR	MCAODC_17805	0.36	+1.5
425,564	+	uidR	MCAODC_17805	0.36	+1.3
425,673	-	uidR	MCAODC_17805	0.54	+0.5
425,684	+	uidR	MCAODC_17805	0.56	-0.9
425,686	+	uidR	MCAODC_17805	0.57	-2.4
425,686	+	uidR	MCAODC_17805	0.57	-0.4
425,687	-	uidR	MCAODC_17805	0.57	-0.1
425,687	-	uidR	MCAODC_17805	0.57	+0.2
425,751	+	uidR	MCAODC_17805	0.68	-0.3
425,752	-	uidR	MCAODC_17805	0.68	-0.7
425,814	-	uidR	MCAODC_17805	0.78	+0.6
425,828	+	uidR	MCAODC_17805	0.81	+0.4
425,952	-				-1.0
425,953	+				+0.9
425,953	+				+2.0
425,954	-				-0.8
425,954	-				+0.4
425,954	-				-0.3
425,954	-				+0.9
425,958	-				-0.8
426,033	-				+1.7
426,143	+				+0.4
426,144	-				+0.4
426,173	-				-1.9
426,669	-	hdhA	MCAODC_17810	0.65	+0.7
426,669	-	hdhA	MCAODC_17810	0.65	-1.9
426,732	-	hdhA	MCAODC_17810	0.73	+1.5
426,794	+	hdhA	MCAODC_17810	0.81	-0.1
426,795	-	hdhA	MCAODC_17810	0.81	-2.7
427,004	-				-3.7
427,031	-				-0.0
427,033	-				-0.9
427,033	-				+0.6
427,188	-	malI	MCAODC_17815	0.13	-1.7
427,330	+	malI	MCAODC_17815	0.27	-0.6
427,365	+	malI	MCAODC_17815	0.31	-0.4
427,380	-	malI	MCAODC_17815	0.32	+0.4
427,616	-	malI	MCAODC_17815	0.55	+0.9
427,616	-	malI	MCAODC_17815	0.55	+1.4
427,857	+	malI	MCAODC_17815	0.78	-0.3
427,858	-	malI	MCAODC_17815	0.79	-1.8