Experiment: WM_Bas09
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt dcuA and cutA are separated by 115 nucleotides cutA and dsbD overlap by 25 nucleotides
MCAODC_02950: dcuA - anaerobic C4-dicarboxylate transporter DcuA, at 592,841 to 594,142
dcuA
MCAODC_02955: cutA - divalent cation tolerance protein CutA, at 594,258 to 594,596
cutA
MCAODC_02960: dsbD - protein-disulfide reductase DsbD, at 594,572 to 596,269
dsbD
Position (kb) 594
595 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 593.294 kb on + strand, within dcuA at 593.294 kb on + strand, within dcuA at 593.294 kb on + strand, within dcuA at 593.294 kb on + strand, within dcuA at 593.294 kb on + strand, within dcuA at 593.294 kb on + strand, within dcuA at 593.295 kb on - strand, within dcuA at 593.295 kb on - strand, within dcuA at 593.295 kb on - strand, within dcuA at 593.331 kb on - strand, within dcuA at 593.401 kb on + strand, within dcuA at 593.402 kb on - strand, within dcuA at 593.402 kb on - strand, within dcuA at 593.402 kb on - strand, within dcuA at 593.402 kb on - strand, within dcuA at 593.402 kb on - strand, within dcuA at 593.402 kb on - strand, within dcuA at 593.438 kb on + strand, within dcuA at 593.541 kb on + strand, within dcuA at 593.541 kb on + strand, within dcuA at 593.541 kb on + strand, within dcuA at 593.542 kb on - strand, within dcuA at 593.542 kb on - strand, within dcuA at 593.554 kb on + strand, within dcuA at 593.554 kb on + strand, within dcuA at 593.554 kb on + strand, within dcuA at 593.554 kb on + strand, within dcuA at 593.555 kb on - strand, within dcuA at 593.558 kb on + strand, within dcuA at 593.558 kb on + strand, within dcuA at 593.559 kb on - strand, within dcuA at 593.559 kb on - strand, within dcuA at 593.559 kb on - strand, within dcuA at 593.559 kb on - strand, within dcuA at 593.559 kb on - strand, within dcuA at 593.559 kb on - strand, within dcuA at 593.666 kb on - strand, within dcuA at 593.731 kb on + strand, within dcuA at 593.731 kb on + strand, within dcuA at 593.732 kb on - strand, within dcuA at 593.732 kb on - strand, within dcuA at 593.732 kb on - strand, within dcuA at 593.738 kb on - strand, within dcuA at 593.765 kb on - strand, within dcuA at 593.873 kb on + strand, within dcuA at 594.034 kb on + strand at 594.035 kb on - strand at 594.047 kb on - strand at 594.140 kb on + strand at 594.140 kb on + strand at 594.141 kb on - strand at 594.141 kb on - strand at 594.188 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.211 kb on + strand at 594.212 kb on - strand at 594.212 kb on - strand at 594.212 kb on - strand at 594.213 kb on + strand at 594.213 kb on + strand at 594.214 kb on - strand at 594.214 kb on - strand at 594.214 kb on - strand at 594.257 kb on + strand at 594.257 kb on + strand at 594.258 kb on - strand at 594.258 kb on - strand at 594.258 kb on - strand at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.301 kb on + strand, within cutA at 594.302 kb on - strand, within cutA at 594.302 kb on - strand, within cutA at 594.302 kb on - strand, within cutA at 594.302 kb on - strand, within cutA at 594.302 kb on - strand, within cutA at 594.302 kb on - strand, within cutA at 594.302 kb on - strand, within cutA at 594.302 kb on - strand, within cutA at 594.302 kb on - strand, within cutA at 594.305 kb on + strand, within cutA at 594.305 kb on + strand, within cutA at 594.305 kb on + strand, within cutA at 594.306 kb on - strand, within cutA at 594.405 kb on + strand, within cutA at 594.406 kb on - strand, within cutA at 594.419 kb on + strand, within cutA at 594.420 kb on - strand, within cutA at 594.420 kb on - strand, within cutA at 594.436 kb on - strand, within cutA at 594.436 kb on - strand, within cutA at 594.436 kb on - strand, within cutA at 594.436 kb on - strand, within cutA at 594.436 kb on - strand, within cutA at 594.461 kb on + strand, within cutA at 594.462 kb on - strand, within cutA at 594.466 kb on + strand, within cutA at 594.467 kb on - strand, within cutA at 594.467 kb on - strand, within cutA at 594.467 kb on - strand, within cutA at 594.539 kb on - strand, within cutA at 594.539 kb on - strand, within cutA at 594.565 kb on - strand at 594.565 kb on - strand at 594.589 kb on + strand at 594.589 kb on + strand at 594.604 kb on - strand at 594.604 kb on - strand at 594.715 kb on + strand at 594.715 kb on + strand at 594.746 kb on + strand, within dsbD at 594.746 kb on + strand, within dsbD at 594.746 kb on + strand, within dsbD at 594.746 kb on + strand, within dsbD at 594.746 kb on + strand, within dsbD at 594.746 kb on + strand, within dsbD at 594.747 kb on - strand, within dsbD at 594.747 kb on - strand, within dsbD at 594.747 kb on - strand, within dsbD at 594.773 kb on - strand, within dsbD at 594.840 kb on - strand, within dsbD at 594.858 kb on - strand, within dsbD at 594.916 kb on - strand, within dsbD at 594.916 kb on - strand, within dsbD at 594.926 kb on + strand, within dsbD at 594.927 kb on - strand, within dsbD at 594.927 kb on - strand, within dsbD at 595.130 kb on + strand, within dsbD at 595.131 kb on - strand, within dsbD at 595.131 kb on - strand, within dsbD at 595.131 kb on - strand, within dsbD at 595.163 kb on - strand, within dsbD at 595.204 kb on + strand, within dsbD at 595.204 kb on + strand, within dsbD at 595.204 kb on + strand, within dsbD at 595.205 kb on - strand, within dsbD at 595.205 kb on - strand, within dsbD at 595.208 kb on + strand, within dsbD at 595.208 kb on + strand, within dsbD at 595.209 kb on - strand, within dsbD at 595.209 kb on - strand, within dsbD at 595.209 kb on - strand, within dsbD at 595.233 kb on - strand, within dsbD at 595.251 kb on + strand, within dsbD at 595.251 kb on + strand, within dsbD at 595.252 kb on - strand, within dsbD at 595.287 kb on + strand, within dsbD at 595.288 kb on - strand, within dsbD at 595.298 kb on + strand, within dsbD at 595.298 kb on + strand, within dsbD at 595.298 kb on + strand, within dsbD at 595.298 kb on + strand, within dsbD at 595.299 kb on - strand, within dsbD at 595.299 kb on - strand, within dsbD at 595.299 kb on - strand, within dsbD at 595.299 kb on - strand, within dsbD at 595.328 kb on - strand, within dsbD at 595.360 kb on + strand, within dsbD at 595.361 kb on - strand, within dsbD at 595.361 kb on - strand, within dsbD at 595.361 kb on - strand, within dsbD at 595.365 kb on + strand, within dsbD at 595.365 kb on + strand, within dsbD at 595.366 kb on - strand, within dsbD at 595.366 kb on - strand, within dsbD at 595.366 kb on - strand, within dsbD at 595.444 kb on + strand, within dsbD at 595.444 kb on + strand, within dsbD at 595.445 kb on - strand, within dsbD at 595.514 kb on + strand, within dsbD at 595.514 kb on + strand, within dsbD at 595.514 kb on + strand, within dsbD at 595.514 kb on + strand, within dsbD at 595.515 kb on - strand, within dsbD at 595.515 kb on - strand, within dsbD at 595.516 kb on + strand, within dsbD at 595.559 kb on + strand, within dsbD at 595.559 kb on + strand, within dsbD at 595.559 kb on + strand, within dsbD at 595.560 kb on - strand, within dsbD at 595.560 kb on - strand, within dsbD at 595.560 kb on - strand, within dsbD at 595.565 kb on + strand, within dsbD at 595.566 kb on - strand, within dsbD at 595.596 kb on + strand, within dsbD at 595.596 kb on + strand, within dsbD at 595.596 kb on + strand, within dsbD at 595.596 kb on + strand, within dsbD
Per-strain Table
Position Strand Gene LocusTag Fraction WM_Bas09 remove 593,294 + dcuA MCAODC_02950 0.35 +0.5 593,294 + dcuA MCAODC_02950 0.35 +0.9 593,294 + dcuA MCAODC_02950 0.35 +1.1 593,294 + dcuA MCAODC_02950 0.35 -1.0 593,294 + dcuA MCAODC_02950 0.35 +1.1 593,294 + dcuA MCAODC_02950 0.35 -0.1 593,295 - dcuA MCAODC_02950 0.35 +0.9 593,295 - dcuA MCAODC_02950 0.35 -0.5 593,295 - dcuA MCAODC_02950 0.35 -1.3 593,331 - dcuA MCAODC_02950 0.38 -0.8 593,401 + dcuA MCAODC_02950 0.43 +0.7 593,402 - dcuA MCAODC_02950 0.43 +1.2 593,402 - dcuA MCAODC_02950 0.43 +1.4 593,402 - dcuA MCAODC_02950 0.43 +0.8 593,402 - dcuA MCAODC_02950 0.43 +0.4 593,402 - dcuA MCAODC_02950 0.43 -2.5 593,402 - dcuA MCAODC_02950 0.43 +0.6 593,438 + dcuA MCAODC_02950 0.46 +0.6 593,541 + dcuA MCAODC_02950 0.54 +0.5 593,541 + dcuA MCAODC_02950 0.54 -2.2 593,541 + dcuA MCAODC_02950 0.54 +0.7 593,542 - dcuA MCAODC_02950 0.54 +0.0 593,542 - dcuA MCAODC_02950 0.54 -0.8 593,554 + dcuA MCAODC_02950 0.55 +0.4 593,554 + dcuA MCAODC_02950 0.55 -1.0 593,554 + dcuA MCAODC_02950 0.55 -2.4 593,554 + dcuA MCAODC_02950 0.55 -2.7 593,555 - dcuA MCAODC_02950 0.55 -2.1 593,558 + dcuA MCAODC_02950 0.55 -0.1 593,558 + dcuA MCAODC_02950 0.55 -0.5 593,559 - dcuA MCAODC_02950 0.55 +0.2 593,559 - dcuA MCAODC_02950 0.55 +0.9 593,559 - dcuA MCAODC_02950 0.55 -0.2 593,559 - dcuA MCAODC_02950 0.55 +0.3 593,559 - dcuA MCAODC_02950 0.55 +0.3 593,559 - dcuA MCAODC_02950 0.55 -0.8 593,666 - dcuA MCAODC_02950 0.63 -1.1 593,731 + dcuA MCAODC_02950 0.68 -0.9 593,731 + dcuA MCAODC_02950 0.68 -1.7 593,732 - dcuA MCAODC_02950 0.68 +0.0 593,732 - dcuA MCAODC_02950 0.68 +1.0 593,732 - dcuA MCAODC_02950 0.68 -1.6 593,738 - dcuA MCAODC_02950 0.69 -1.4 593,765 - dcuA MCAODC_02950 0.71 -1.1 593,873 + dcuA MCAODC_02950 0.79 -0.8 594,034 + -0.0 594,035 - -0.1 594,047 - +0.1 594,140 + -0.7 594,140 + -2.5 594,141 - -0.4 594,141 - -0.3 594,188 + -0.3 594,211 + -3.3 594,211 + +0.5 594,211 + -0.2 594,211 + +0.4 594,211 + +0.2 594,211 + -0.8 594,211 + -0.3 594,211 + -1.5 594,211 + -2.0 594,211 + -3.6 594,212 - +1.8 594,212 - +1.6 594,212 - -0.5 594,213 + -0.8 594,213 + +1.5 594,214 - +0.8 594,214 - -0.4 594,214 - +0.6 594,257 + +0.6 594,257 + -0.0 594,258 - +0.9 594,258 - +0.4 594,258 - +0.8 594,301 + cutA MCAODC_02955 0.13 +1.4 594,301 + cutA MCAODC_02955 0.13 +0.5 594,301 + cutA MCAODC_02955 0.13 +2.1 594,301 + cutA MCAODC_02955 0.13 -0.7 594,301 + cutA MCAODC_02955 0.13 -0.5 594,301 + cutA MCAODC_02955 0.13 -1.1 594,301 + cutA MCAODC_02955 0.13 +1.3 594,301 + cutA MCAODC_02955 0.13 +0.2 594,301 + cutA MCAODC_02955 0.13 -2.1 594,301 + cutA MCAODC_02955 0.13 -0.3 594,302 - cutA MCAODC_02955 0.13 +0.4 594,302 - cutA MCAODC_02955 0.13 +0.8 594,302 - cutA MCAODC_02955 0.13 +0.9 594,302 - cutA MCAODC_02955 0.13 +1.0 594,302 - cutA MCAODC_02955 0.13 +0.0 594,302 - cutA MCAODC_02955 0.13 +0.6 594,302 - cutA MCAODC_02955 0.13 -0.9 594,302 - cutA MCAODC_02955 0.13 +1.0 594,302 - cutA MCAODC_02955 0.13 +0.2 594,305 + cutA MCAODC_02955 0.14 +0.7 594,305 + cutA MCAODC_02955 0.14 +1.0 594,305 + cutA MCAODC_02955 0.14 -3.0 594,306 - cutA MCAODC_02955 0.14 -0.2 594,405 + cutA MCAODC_02955 0.43 -0.1 594,406 - cutA MCAODC_02955 0.44 +0.7 594,419 + cutA MCAODC_02955 0.47 +0.5 594,420 - cutA MCAODC_02955 0.48 +0.6 594,420 - cutA MCAODC_02955 0.48 +0.0 594,436 - cutA MCAODC_02955 0.53 -3.3 594,436 - cutA MCAODC_02955 0.53 +1.2 594,436 - cutA MCAODC_02955 0.53 -1.0 594,436 - cutA MCAODC_02955 0.53 +0.5 594,436 - cutA MCAODC_02955 0.53 +0.2 594,461 + cutA MCAODC_02955 0.60 +0.7 594,462 - cutA MCAODC_02955 0.60 +0.1 594,466 + cutA MCAODC_02955 0.61 +0.7 594,467 - cutA MCAODC_02955 0.62 +0.1 594,467 - cutA MCAODC_02955 0.62 +0.1 594,467 - cutA MCAODC_02955 0.62 +1.7 594,539 - cutA MCAODC_02955 0.83 -1.8 594,539 - cutA MCAODC_02955 0.83 +0.4 594,565 - +1.2 594,565 - +0.9 594,589 + +1.2 594,589 + +0.6 594,604 - -1.9 594,604 - +0.7 594,715 + -1.0 594,715 + -0.4 594,746 + dsbD MCAODC_02960 0.10 +1.6 594,746 + dsbD MCAODC_02960 0.10 -0.5 594,746 + dsbD MCAODC_02960 0.10 +0.7 594,746 + dsbD MCAODC_02960 0.10 -0.4 594,746 + dsbD MCAODC_02960 0.10 -1.0 594,746 + dsbD MCAODC_02960 0.10 +0.6 594,747 - dsbD MCAODC_02960 0.10 +0.8 594,747 - dsbD MCAODC_02960 0.10 +0.4 594,747 - dsbD MCAODC_02960 0.10 +1.0 594,773 - dsbD MCAODC_02960 0.12 -0.4 594,840 - dsbD MCAODC_02960 0.16 +2.5 594,858 - dsbD MCAODC_02960 0.17 +0.4 594,916 - dsbD MCAODC_02960 0.20 -2.1 594,916 - dsbD MCAODC_02960 0.20 +0.9 594,926 + dsbD MCAODC_02960 0.21 -0.8 594,927 - dsbD MCAODC_02960 0.21 +0.1 594,927 - dsbD MCAODC_02960 0.21 +0.7 595,130 + dsbD MCAODC_02960 0.33 +1.3 595,131 - dsbD MCAODC_02960 0.33 +0.9 595,131 - dsbD MCAODC_02960 0.33 +0.7 595,131 - dsbD MCAODC_02960 0.33 -0.3 595,163 - dsbD MCAODC_02960 0.35 +1.5 595,204 + dsbD MCAODC_02960 0.37 -0.1 595,204 + dsbD MCAODC_02960 0.37 -0.7 595,204 + dsbD MCAODC_02960 0.37 -0.6 595,205 - dsbD MCAODC_02960 0.37 -0.7 595,205 - dsbD MCAODC_02960 0.37 +0.0 595,208 + dsbD MCAODC_02960 0.37 -1.4 595,208 + dsbD MCAODC_02960 0.37 +0.9 595,209 - dsbD MCAODC_02960 0.38 -1.6 595,209 - dsbD MCAODC_02960 0.38 -0.1 595,209 - dsbD MCAODC_02960 0.38 -0.5 595,233 - dsbD MCAODC_02960 0.39 +0.6 595,251 + dsbD MCAODC_02960 0.40 +1.0 595,251 + dsbD MCAODC_02960 0.40 +0.5 595,252 - dsbD MCAODC_02960 0.40 +0.3 595,287 + dsbD MCAODC_02960 0.42 +0.2 595,288 - dsbD MCAODC_02960 0.42 -1.7 595,298 + dsbD MCAODC_02960 0.43 -1.1 595,298 + dsbD MCAODC_02960 0.43 +0.9 595,298 + dsbD MCAODC_02960 0.43 -0.9 595,298 + dsbD MCAODC_02960 0.43 +1.3 595,299 - dsbD MCAODC_02960 0.43 +1.3 595,299 - dsbD MCAODC_02960 0.43 -0.4 595,299 - dsbD MCAODC_02960 0.43 -0.2 595,299 - dsbD MCAODC_02960 0.43 -1.2 595,328 - dsbD MCAODC_02960 0.45 +0.8 595,360 + dsbD MCAODC_02960 0.46 +0.4 595,361 - dsbD MCAODC_02960 0.46 -1.1 595,361 - dsbD MCAODC_02960 0.46 +0.2 595,361 - dsbD MCAODC_02960 0.46 +0.1 595,365 + dsbD MCAODC_02960 0.47 -0.8 595,365 + dsbD MCAODC_02960 0.47 +0.2 595,366 - dsbD MCAODC_02960 0.47 +0.7 595,366 - dsbD MCAODC_02960 0.47 -0.3 595,366 - dsbD MCAODC_02960 0.47 +0.2 595,444 + dsbD MCAODC_02960 0.51 -0.5 595,444 + dsbD MCAODC_02960 0.51 -0.6 595,445 - dsbD MCAODC_02960 0.51 -0.9 595,514 + dsbD MCAODC_02960 0.55 -0.1 595,514 + dsbD MCAODC_02960 0.55 +2.1 595,514 + dsbD MCAODC_02960 0.55 +1.5 595,514 + dsbD MCAODC_02960 0.55 -2.6 595,515 - dsbD MCAODC_02960 0.56 +0.7 595,515 - dsbD MCAODC_02960 0.56 -0.6 595,516 + dsbD MCAODC_02960 0.56 -0.1 595,559 + dsbD MCAODC_02960 0.58 +0.1 595,559 + dsbD MCAODC_02960 0.58 -0.4 595,559 + dsbD MCAODC_02960 0.58 -0.8 595,560 - dsbD MCAODC_02960 0.58 +0.7 595,560 - dsbD MCAODC_02960 0.58 -0.2 595,560 - dsbD MCAODC_02960 0.58 +1.3 595,565 + dsbD MCAODC_02960 0.58 -0.0 595,566 - dsbD MCAODC_02960 0.59 +0.0 595,596 + dsbD MCAODC_02960 0.60 +1.2 595,596 + dsbD MCAODC_02960 0.60 +0.6 595,596 + dsbD MCAODC_02960 0.60 +0.2 595,596 + dsbD MCAODC_02960 0.60 -1.0
Or see this region's nucleotide sequence